Literature DB >> 34228134

DNA metabarcoding of the leachate microbiota from sanitary landfill: potential for bioremediation process.

Michel Rodrigo Zambrano Passarini1, João Victor Fonseca Moreira1, Jose Alejandro Morales Gomez1, Rafaella Costa Bonugli-Santos2.   

Abstract

Leachate generation contains a variety of toxic compounds, and is a major problem for municipal solid waste (MSW). Microbial profile knowledge is essential to new alternatives and improvements in current treatments of these effluents. In this respect, the microbial community in the leachate from the sanitary landfill of the city of Foz do Iguaçu was analyzed. The 16S rDNA metabarcoding suggested the dominance of fermenting bacteria belonging to Firmicutes phylum, followed by Proteobacteria, Bacteroidetes, and Synergistetes. The most abundant genera were Sedimentibacter, Vulcanibacillus, and Anaerovorax. However, 60% of amplicon sequence variants (ASVs) were not classified taxonomically. In addition, an expressive abundance was attributed to the superphylum known as PVC group, little studied and with unknown scientific potential. The leachate acidogenic phase was masked in the chemical and physical analyzes. Nevertheless, it was evidenced in the metabarcoding methodology. No specifically methanogenic group was detected in significant abundance. Therefore, from bacterial community identification, a bioremediation process can be designed. Enriched culture media can be developed and targeted to the recovery of specific groups which may be involved in leachate biodegradation. What is more, the results expand the knowledge of bacterial diversity, especially from the presence of unknown genera in this habitat.

Entities:  

Keywords:  16S rDNA; Biological treatment; Municipal solid waste; Next-generation sequencing; Prokaryote diversity

Year:  2021        PMID: 34228134     DOI: 10.1007/s00203-021-02471-8

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  21 in total

1.  Kinetics of nitrogen removal from sanitary landfill leachate.

Authors:  Katarzyna Kaczorek; Stanisław Ledakowicz
Journal:  Bioprocess Biosyst Eng       Date:  2006-08-30       Impact factor: 3.210

2.  Vulcanibacillus modesticaldus gen. nov., sp. nov., a strictly anaerobic, nitrate-reducing bacterium from deep-sea hydrothermal vents.

Authors:  S L'Haridon; M L Miroshnichenko; N A Kostrikina; B J Tindall; S Spring; P Schumann; E Stackebrandt; E A Bonch-Osmolovskaya; C Jeanthon
Journal:  Int J Syst Evol Microbiol       Date:  2006-05       Impact factor: 2.747

3.  Partial ammonium oxidation to nitrite of high ammonium content urban landfill leachates.

Authors:  R Ganigué; H López; M D Balaguer; J Colprim
Journal:  Water Res       Date:  2007-05-08       Impact factor: 11.236

4.  Focus: Synergistetes.

Authors:  Philip Hugenholtz; Sean D Hooper; Nikos C Kyrpides
Journal:  Environ Microbiol       Date:  2009-06       Impact factor: 5.491

5.  16S rRNA gene-based comprehensive analysis of microbial community compositions in a full-scale leachate treatment system.

Authors:  Hoang T N Dao; Kyohei Kuroda; Nozomi Nakahara; Tsuyoshi Danshita; Masashi Hatamoto; Takashi Yamaguchi
Journal:  J Biosci Bioeng       Date:  2016-09-01       Impact factor: 2.894

6.  Thiophaeococcus fuscus sp. nov., isolated from a lagoon.

Authors:  B Divyasree; K V N S Lakshmi; Ch Sasikala; Ch V Ramana
Journal:  Int J Syst Evol Microbiol       Date:  2014-05-08       Impact factor: 2.747

7.  Nitrous oxide reduction genetic potential from the microbial community of an intermittently aerated partial nitritation SBR treating mature landfill leachate.

Authors:  J Gabarró; E Hernández-Del Amo; F Gich; M Ruscalleda; M D Balaguer; J Colprim
Journal:  Water Res       Date:  2013-10-23       Impact factor: 11.236

8.  DADA2: High-resolution sample inference from Illumina amplicon data.

Authors:  Benjamin J Callahan; Paul J McMurdie; Michael J Rosen; Andrew W Han; Amy Jo A Johnson; Susan P Holmes
Journal:  Nat Methods       Date:  2016-05-23       Impact factor: 28.547

9.  A Small Number of Low-abundance Bacteria Dominate Plant Species-specific Responses during Rhizosphere Colonization.

Authors:  Wayne Dawson; Jens Hör; Markus Egert; Mark van Kleunen; Michael Pester
Journal:  Front Microbiol       Date:  2017-05-29       Impact factor: 5.640

10.  Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment.

Authors:  Mohammad Bahram; Sten Anslan; Falk Hildebrand; Peer Bork; Leho Tedersoo
Journal:  Environ Microbiol Rep       Date:  2018-09-12       Impact factor: 3.541

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  1 in total

1.  DNA Metabarcoding from Microbial Communities Recovered from Stream and Its Potential for Bioremediation Processes.

Authors:  Júlia Ronzella Ottoni; Rosane Dos Santos Grignet; Maria Gabriela Azevedo Barros; Suzan Prado Fernandes Bernal; Andressa Alves Silva Panatta; Gileno Vieira Lacerda-Júnior; Victor Borin Centurion; Tiago Palladino Delforno; Caroline da Costa Silva Goncalves; Michel Rodrigo Zambrano Passarini
Journal:  Curr Microbiol       Date:  2022-01-20       Impact factor: 2.188

  1 in total

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