Literature DB >> 3422341

Structure and expression of the human theta 1 globin gene.

S L Hsu1, J Marks, J P Shaw, M Tam, D R Higgs, C C Shen, C K Shen.   

Abstract

The recently identified theta-globin gene subfamily consists of the theta 1-globin gene located downstream from the alpha 1-globin gene, and several other members including at least one truncated, processed pseudogene psi theta 2 (refs 1,6). Unlike the theta 1-globin genes of the rabbit and galago, the structure of these genes in the orangutan and baboon and their flanking regions show no apparent defects that would prevent their expression. Both theta 1-globin genes are split into three exons with the potential to code for a polypeptide of length 141 amino acids. Besides differing by 26% in replacement-site substitutions, the theta 1 and alpha 1-globin genes of the orangutan and baboon also differ in their promoter structures, in the use of TGA versus TAA as the termination codon, and in the use of AGTAAA versus AATAAA as the polyadenylation signal. In contrast, the two theta 1-globin genes from primates only differ by 1.7% in the replacement-site substitutions. Here we present the complete DNA sequence of a cloned theta 1-globin gene of humans, and show that it contains no apparent defects that would abolish its expression. Furthermore, by primer extension of single-stranded oligonucleotide probes, we show that the theta 1-globin gene of humans is transcribed in an erythroleukemia cell line K562. Three messenger RNA species were detected, with 5'-ends mapping to approximately 70 base pairs (bp) downstream from a TATA promoter sequence, at 8 bp downstream from a GGGCGG promoter sequence and at 40 bp upstream from the ATG inititrion codon, respectively. Haemin treatment of the K562 cells slightly enhances the level of the longest theta 1-transcript. Our results provide strong evidence that the theta 1-globin gene of humans is transcriptionally active in cells of erythroid origin, and suggests the presence of a functional theta 1-polypeptide in specific cells, possibly those of early erythroid tissue.

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Year:  1988        PMID: 3422341     DOI: 10.1038/331094a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  11 in total

1.  Patterns of variant polyadenylation signal usage in human genes.

Authors:  E Beaudoing; S Freier; J R Wyatt; J M Claverie; D Gautheret
Journal:  Genome Res       Date:  2000-07       Impact factor: 9.043

2.  A newly discovered human alpha-globin gene.

Authors:  Sung-Ho Goh; Y Terry Lee; Natarajan V Bhanu; Margaret C Cam; Richard Desper; Brian M Martin; Ramy Moharram; Robert B Gherman; Jeffery L Miller
Journal:  Blood       Date:  2005-04-26       Impact factor: 22.113

3.  Anomalous and selective DNA mutations of the Old World monkey alpha-globin genes.

Authors:  J P Shaw; J Marks; C C Shen; C K Shen
Journal:  Proc Natl Acad Sci U S A       Date:  1989-02       Impact factor: 11.205

4.  The 5' splice site: phylogenetic evolution and variable geometry of association with U1RNA.

Authors:  M Jacob; H Gallinaro
Journal:  Nucleic Acids Res       Date:  1989-03-25       Impact factor: 16.971

5.  Sequential insertion of Alu family repeats into specific genomic sites of higher primates.

Authors:  A D Bailey; C K Shen
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-01       Impact factor: 11.205

6.  Characterization of the human immunoglobulin epsilon mRNAs and their polyadenylation sites.

Authors:  F D Batista; D G Efremov; T Tkach; O R Burrone
Journal:  Nucleic Acids Res       Date:  1995-12-11       Impact factor: 16.971

7.  Unique sequence organization and erythroid cell-specific nuclear factor-binding of mammalian theta 1 globin promoters.

Authors:  J H Kim; C Y Yu; A Bailey; R Hardison; C K Shen
Journal:  Nucleic Acids Res       Date:  1989-07-25       Impact factor: 16.971

8.  The alpha-globin gene family of an Australian marsupial, Macropus eugenii: the long evolutionary history of the theta-globin gene and its functional status in mammals.

Authors:  Steven J B Cooper; David Wheeler; Rory M Hope; Gaynor Dolman; Kathleen M Saint; Andrew A Gooley; Robert A B Holland
Journal:  J Mol Evol       Date:  2005-05       Impact factor: 2.395

9.  Evolution of hemoglobin and its genes.

Authors:  Ross C Hardison
Journal:  Cold Spring Harb Perspect Med       Date:  2012-12-01       Impact factor: 6.915

10.  Globin gene expression in erythroid human fetal liver cells.

Authors:  T J Ley; K A Maloney; J I Gordon; A L Schwartz
Journal:  J Clin Invest       Date:  1989-03       Impact factor: 14.808

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