| Literature DB >> 34221733 |
Zhenjun Ji1, Rui Zhang1, Mingming Yang1, Wenjie Zuo1, Yuyu Yao1, Yangyang Qu1, Yamin Su1, Zhuyuan Liu1, Ziran Gu1, Genshan Ma1.
Abstract
BACKGROUND: Acute myocardial infarction (AMI) is one of the fatal cardiac emergencies. The detection of triggering receptor expressed on myeloid cells 1 (TREM1), a cell surface immunoglobulin that amplifies pro-inflammatory responses, screened by bioinformatics was shown to be significant in diagnosing and predicting the prognosis of AMI.Entities:
Keywords: Bioinformatics; Diagnosis; Myocardial infarction; Prognosis; TREM1
Year: 2021 PMID: 34221733 PMCID: PMC8231339 DOI: 10.7717/peerj.11655
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Figure 1The flow chart of this study.
Figure 2Candidate genes screening and PPI network construction.
(A/B/C) The volcano plots of GSE66360, GSE60993 and GSE61144 respectively. (D/E) Venn diagram showed 29 upregulated and three downregulated common genes were obtained respectively. (F) PPI network of DEGs.
Common differential expressed genes among GSE66360, GSE61144 and GSE60993.
| 29 up-regulated DEGs | 3 down-regulated DEGs |
|---|---|
| TLR4 RGS2 CEBPD CLEC4D AQP9 CMTM2 CPD LRG1 GPR97 PYGL MXD1 DUSP1 IRAK3 DYSF CLEC4E IRS2 S100A12 TREM1 RBP7 VNN2 ACSL1 CXCL16 CDA CRISPLD2 NFIL3 CYP4F3 MCEMP1 FPR1 MMP9 | EOMES GZMA GZMK |
Basic characteristics of enrolling patients.
| Basline characteristics | Normal group ( | AMI group ( | |
|---|---|---|---|
| Age (years) | 54.57 ± 10.20 | 61.53 ± 12.26 | 0.030 |
| Gender (male/female) | 12/23 | 83/29 | 0.000 |
| Smoking | 4 | 52 | 0.000 |
| Diabetes | 4 | 38 | 0.010 |
| Hypertension | 14 | 70 | 0.033 |
| BMI (kg/m2) | 25.17 ± 3.70 | 25.37 ± 3.51 | 0.773 |
| Systolic blood pressure (mmHg) | 130.43 ± 14.30 | 131.25 ± 20.52 | 0.826 |
| WBC (109/L) | 6.16 ± 1.63 | 9.72 ± 3.42 | 0.000 |
| RBC (1012/L) | 4.61 ± 0.58 | 4.41 ± 0.64 | 0.108 |
| Hb (g/L) | 138.54 ± 16.67 | 133.90 ± 19.65 | 0.210 |
| ALB (g/L) | 40.74 ± 4.41 | 38.16 ± 3.95 | 0.001 |
| DBil (umol/L) | 3.09 ± 1.23 | 4.12 ± 3.18 | 0.067 |
| ALT (U/L) | 27.34 ± 23.29 | 50.30 ± 43.11 | 0.000 |
| AST (U/L) | 23.23 ± 10.72 | 136.08 ± 151.97 | 0.000 |
| LDH (U/L) | 172.00 (149.25, 200.25) | 289.50 (184.25, 598.75) | – |
| CK (U/L) | 74.50 (55.5, 112.25) | 284.00 (105.00, 1234.00) | – |
| FPG (mmol/L) | 5.98 ± 1.96 | 7.98 ± 3.37 | 0.002 |
| BUN (mmol/L) | 4.98 ± 1.26 | 6.72 ± 4.91 | 0.002 |
| Scr (μmol/L) | 66.00 (55.00, 79.50) | 73.00 (64.00, 86.50) | – |
| UA (μmol/L) | 312.97 ± 95.56 | 351.90 ± 113.14 | 0.093 |
| TG (mmol/L) | 1.62 ± 0.90 | 1.69 ± 1.09 | 0.743 |
| TChol (mmol/L) | 4.60 ± 0.93 | 4.58 ± 1.08 | 0.942 |
| HDL (mmol/L) | 1.24 ± 0.33 | 1.09 ± 0.24 | 0.019 |
| LDL (mmol/L) | 2.78 ± 0.82 | 2.80 ± 0.91 | 0.918 |
| HbAC (%) | 6.02 ± 1.43 | 6.78 ± 1.61 | 0.047 |
| BNP (pg/ml) | 20.00 (7.00, 63.00) | 138.50 (42.30, 530.25) | – |
| TnI (ng/ml) | 0.001 (0.003, 0.01) | 1.435 (0.017, 13.85) | – |
| CRP (mg/L) | 0.82 (0.81, 8.02) | 7.67 (0.82, 20.75) | – |
| LVEF (%) | 0.80 ± 0.60 | 0.56 ± 0.11 | 0.000 |
| INR | 1.06 (1.02, 1.09) | 1.10 (1.05, 1.19) | – |
| Ddimer (μg/L) | 71.00 (47.00, 104.00) | 112.50 (66.25, 232.25) | – |
Notes:
p < 0.05.
p < 0.01.
If the data do not satisfy normality and homogeneity of variance (SD ≥ χ), median and quartile (25%, 75%) were calculated, otherwise, the data was described by X ± SD.
RBC, red blood cells; WBC, white blood cells; Hb, hemoglobin; ALT, alanine aminotransferase; AST, aspartate aminotransferase; TC, total cholesterol; TG, total triglyceride; ALB, albumin; DBil, direct bilirubin; BUN, blood urea nitrogen; UA, uric acid; FPG, fasting plasma glucose; HbAC, glycosylated hemoglobin; CRP, C-reactive protein; TG, triglyceride; TChol, total cholesterol; BNP, brain natriuretic peptide and LVEF, left ventricular ejected fraction.
Figure 3TREM1 expression in different groups.
(A) TREM1 expression in three groups. Compared with the normal group (140.6 ± 57.0 pg/ml, n = 35), TREM1 expression was markedly increased in AMI group (200.6 ± 87.09 pg/ml, n = 112) (p < 0.001). (B) TREM1 expression in groups with different lesion vessels. TREM1 expression in triple-vessels group (223.9 ± 101.0 pg/ml, n = 37) was significantly higher than that of single-vessel group (172.5 ± 74.5 pg/ml, n = 36) (p < 0.05), the level of which in double-vessels group was 202.7 ± 77.3 (pg/ml, n = 35). (C) TREM1 expression in normal and AMI group with or without diabetes. *p < 0.05, ***p < 0.001, #p = 0.06.
Pearson and multilinear regression analysis associated with TREM1.
| Variables | Pearson analysis | Multilinear analysis | |||
|---|---|---|---|---|---|
| r | β | t | |||
| Age (years) | 0.222 | 0.007 | |||
| Neutrophil (109/L) | 0.209 | 0.011 | |||
| BUN (mmol/L) | 0.253 | 0.003 | |||
| UA (μmol/L) | 0.335 | <0.001 | |||
| HbAC (%) | 0.379 | <0.001 | 16.520 | 1.979 | 0.055 |
| BNP (pg/ml) | 0.411 | <0.001 | 0.035 | 2.922 | 0.006 |
| LA (mm) | 0.212 | 0.014 | |||
| ALB (g/L) | −0.187 | 0.024 | |||
| ApoA1 (g/L) | −0.167 | 0.046 | |||
| Vessels | 0.244 | 0.011 | |||
| Gensini score | 0.095 | 0.327 | |||
Notes:
p < 0.05.
p < 0.01.
Significant variables with no internal relation in pearson analysis were entered into multilinear analysis, p < 0.1 was set for entering variables to avoid losing significant factors. Gensini score representing the severity of CAD was also included in analysis. Methods of “Stepwise”, “Forward” and “Backward” in multiple linear regression were all performed by SPSS, which showed that BNP and HbAC were two important independent factors influencing TREM1 expression. Finally, the fitting equation: Ý (TREM1) = 0.035 × BNP + 16.520 × HbAC + 66.233 (R2 = 0.283, F = 7.905, p = 0.001).
BUN, blood urea nitrogen; UA, uric acid; HbAC, glycosylated hemoglobin; BNP, brain natriuretic peptide; LA, left atrium and ALB, albumin.
Figure 4The diagnosis and prognosis value of TREM1 in AMI.
(A) In AMI group (p < 0.001), the AUC was 0.721, with a sensitivity of 0.786 and a specificity of 0.600 (Yoden Index = 0.386). (B) In AMI groups without diabetes, the diagnostic sensitivity was 0.757, the specificity was 0.631 and the AUC was 0.724 (Yoden Index = 0.402, p < 0.001). (C) In Kaplan–Meier analysis, incidence of MACEs in high risk group was obviously higher than that in low risk group (p < 0.0001). 0, low risk group; 1, high risk group.
Univariate and variate Cox regression analysis for predicting 6-month MACEs after AMI.
| Variables | Unvariate analysis | Variate analysis | ||||
|---|---|---|---|---|---|---|
| Exp (β) | Wald | Exp (β) | Wald | |||
| TREM1 (pg/ml) | 1.007 | 35.535 | <0.001 | 1.006 | 23.411 | 0.000 |
| Heartrate | 1.029 | 10.479 | 0.001 | |||
| RBC (1012/L) | 0.656 | 3.896 | 0.048 | |||
| Hb (g/L) | 0.984 | 5.543 | 0.019 | 0.981 | 7.459 | 0.006 |
| CK (U/L) | 1.000 | 5.246 | 0.022 | |||
| FPG (mmol/L) | 1.092 | 5.334 | 0.021 | |||
| BUN (mmol/L) | 1.052 | 6.216 | 0.013 | |||
| UA (μmol/L) | 1.002 | 4.049 | 0.044 | |||
| LA (mm) | 1.874 | 3.826 | 0.050 | |||
| IVS (mm) | 1.613 | 4.680 | 0.031 | 5.505 | 4.704 | 0.030 |
| LV (mm) | 1.824 | 5.453 | 0.020 | |||
| LVEF (%) | 0.013 | 10.849 | 0.001 | |||
| Vessels | 1.461 | 4.229 | 0.040 | |||
Notes:
p < 0.05.
p < 0.01.
Significant variables in univariate analysis were entered into multiple Cox regression and only TREM1 was screened out as a significant variable, which indicated that TREM1 was an independent factor predicting 6-month MACEs.
RBC, red blood cells; Hb, hemoglobin; CK, creatine kinase; BUN, blood urea nitrogen; UA, uric acid; FPG, fasting plasma glucose; LA, left atrium and LVEF, left ventricular ejected fraction.