| Literature DB >> 34221390 |
Neus Roca1, Alvaro Madrid2, Mercedes Lopez3, Gloria Fraga3,4, Elias Jatem5,6, Jorge Gonzalez5,6, Cristina Martinez5, Alfons Segarra5,6.
Abstract
OBJECTIVES: Idiopathic focal segmental glomerulosclerosis (FSGS) has been linked to immunological and inflammatory response dysregulations. The aim of this study was to find endotypes of FSGS patients using a cluster (CL) analysis based on inflammatory and immunological variables, and to analyse whether a certain endotype is associated with response to treatment with corticosteroids.Entities:
Keywords: cluster analysis; endotypes; focal segmental glomerulosclerosis; idiopathic nephrotic syndrome; inflammatory response; interleukins; lymphocyte populations
Year: 2020 PMID: 34221390 PMCID: PMC8243272 DOI: 10.1093/ckj/sfaa265
Source DB: PubMed Journal: Clin Kidney J ISSN: 2048-8505
FIGURE 1:Flow chart of patient selection.
Clinical and biochemical characteristics of FSGS patients
| Variables | FSGS patients |
|---|---|
| Age, median (IQR), years | 35 (25–49) |
| Gender: male, | 37 (46.8) |
| Steroid resistance, | 42 (53.2) |
| Creatinine, mg/dL | 1.1 (0.86–1.42) |
| eGFR, mL/min/1.73 m2 | 88 (74.4–104.4) |
| Proteinuria, g/dL | 10.8 (8.2–14.4) |
| Albumin, g/dL | 2.48 (2–2.78) |
| Th1, % | 23 (22–25) |
| TNFα, pg/mL | 8.8 (5.4–14.8) |
| IFNγ, pg/mL | 14.4 (7.7–24.4) |
| IL-12, pg/mL | 664.5 (478–774) |
| Th2, % | 34 (31–39) |
| IL-4, pg/mL | 3.6 (2.1–6.1) |
| IL-5, pg/mL | 4.5 (2.2–6) |
| IL-13, pg/mL | 4.1 (2.4–6.4) |
| IgE, g/dL | 49 (46–98) |
| Th17, % | 3.3 (2.4–24.5) |
| Th1–Th17, % | 6.5 (3.9–9.8) |
| Treg, % | 2.1 (1.4–3) |
| IL-17, pg/mL | 7.2 (3–31) |
| IL-23, pg/mL | 35.6 (25.6–51.6) |
| sIL1R, pg/mL | 2257 (1383.9–3085.4) |
| IL-6, pg/mL | 3.9 (1.8–12.7) |
| Hx, mg/mL | 110.9 (49.1–324.9) |
| Hgl, mg/dL | 137.8 (90.8–338.8) |
| suPAR, ng/mL | 3421.8 (2409.6–4830) |
| uCD80, ng/mg creat | 36 (16.4–56) |
Values are expressed as median [interquartile range (IQR)] 25–75th quartile unless otherwise specified.
Results of PCA and percentage of variability retained by each component for the five components with eigenvalues >1
| Component | Initial eigenvalues | Extraction sums of squared loadings | Rotation sums of squared loadings | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Total | % of variance | Cumulative % | Total | % of variance | Cumulative % | Total | % of variance | Cumulative % | |
| 1 | 6.152 | 30.762 | 30.762 | 6.152 | 30.762 | 30.762 | 4.746 | 23.729 | 23.7 |
| 2 | 3.792 | 18.962 | 49.724 | 3.792 | 18.962 | 49.724 | 3.616 | 18.080 | 41.8 |
| 3 | 2.185 | 10.923 | 60.647 | 2.185 | 10.923 | 60.647 | 3.473 | 17.364 | 59.1 |
| 4 | 1.357 | 6.785 | 67.432 | 1.357 | 6.785 | 67.432 | 1.438 | 7.190 | 66.3 |
| 5 | 1.139 | 5.694 | 73.126 | 1.139 | 5.694 | 73.126 | 1.353 | 6.763 | 73.1 |
Rotated component matrix showing the variables retained in each component.
| Variables | Component | ||||
|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | |
| Th2 | 0.923 | – | – | – | – |
| IL-4 | 0.908 | – | – | – | – |
| IL-13 | 0.852 | – | – | – | – |
| IgE | 0.749 | – | – | – | – |
| Th17 | −0.639 | 0.785 | – | – | – |
| IL-23 | – | 0.774 | – | – | – |
| IL-12 | – | 0.753 | – | – | – |
| Tregs | – | −0.670 | – | – | – |
| IL-17 | – | 0.651 | – | – | – |
| Th1 | – | −0.532 | – | – | – |
| IL-6 | – | – | 0.818 | – | – |
| Hx | – | – | 0.800 | – | – |
| sIL1R | – | – | 0.765 | – | – |
| TNFα | – | – | 0.748 | – | – |
| Hgl | – | – | 0.720 | – | – |
| IFNγ | – | – | – | 0.809 | |
| suPAR | – | – | – | – | 0.867 |
Variables with scores ˂0.4 are not represented.
FIGURE 2:3D scatter-plot graphic representation of the distribution of variables according to the first three PCA that retained the 59.1% of total variability.
FIGURE 3:Classification dendogram of patients showing the existence of three differentiated CLs.
Characteristics of FSGS patients according to CL differentiation
| Variables | CL1, | CL2, | CL3, | P1 | P2 | P3 |
|---|---|---|---|---|---|---|
| Clinical characteristics | ||||||
| Age, years | 34.5 (28–47.5) | 39 (32.5–58) | 34.5 (16–46.5) | 0.755 | 1 | 0.404 |
| Cortico-resistance, | 16 (72.7) | 4 (25) | 22 (53.7) | 0.018 | 0.140 | 0.018 |
| Biochemical characteristics | ||||||
| Creatinine, mg/dL | 1.1 (0.75–1.3) | 1 (0.8–1.4) | 1.1 (0.9–1.4) | 1 | 1 | 1 |
| eGFR, mL/min/1.73 m2 | 84.9 (74.1–97.3) | 90 (81.8–113.8) | 87.9 (73.6–104.4) | 1 | 0.818 | 1 |
| Proteinuria, g/dL | 10.1 (7.8–13.2) | 13.3 (9.1–18) | 9.3 (8.2–14) | 0.207 | 1 | 0.155 |
| Albumin, g/dL | 2.44 (2.18–2.6) | 2.15 (1.5–3.3) | 2.49 (2.2–2.8) | 1 | 1 | 1 |
| Th1, % | 23 (20–24) | 22 (22–26) | 23.5 (22–25.7) | 1 |
| 0.063 |
| TNFα, pg/mL | 5.85 (4.9–7.5) | 5.4 (2.9–7.3) | 14.1 (10.8–18.7) | 1 |
|
|
| IFNγ, pg/mL | 12 (4.9–26) | 10.5 (4–16.9) | 16.7 (10.3–24.4) | 1 | 1 | 1 |
| IL-12, pg/mL | 760 (709–881.8) | 580 (504.5–665) | 552 (348–771) |
|
| 0.403 |
| Th2, % | 32.5 (30–37.3) | 61 (37–67.5) | 34 (32–37) |
| 1 |
|
| IL-4, pg/mL | 4.3 (2.7–4.9) | 13 (4.6–14.8) | 2.65 (2–3.9) |
| 1 |
|
| IL-5, pg/mL | 3.5 (2–4.7) | 6.9 (2.3–8.6) | 4.6 (2.4–5.7) |
| 1 |
|
| IL-13, pg/mL | 4.2 (3.7–5.6) | 11 (4.4–15.3) | 3.7 (1.3–5.2) |
| 0.710 |
|
| IgE, mg/mL | 47 (45–48) | 143 (48.5–160) | 50.5 (45.2–98) |
| 0.292 |
|
| Th17, % | 30.9 (25.1–34.7) | 3 (2.1–3.8) | 3 (2.1–3.7) |
|
| 1 |
| Th1–Th17, % | 13.3 (7.2–17.6) | 5.6 (2–8.6) | 5 (3.8–8.7) |
|
| 0.506 |
| Treg, % | 0.8 (0.6–1) | 2.9 (2.1–3.2) | 2.5 (1.9–3.7) |
|
| 1 |
| IL-17, pg/mL | 47.1 (38.1–54.9) | 4.7 (2.3–8) | 4.7 (2.8–7.9) |
|
| 0.737 |
| IL23, pg/mL | 57.3 (35.1–63.6) | 37 (25.3–48.8) | 32 (23–42) |
|
| 1 |
| sIL1R, pg/mL | 2294.9 (1496.2–2916.6) | 1857.8 (1162.1–2345) | 2296.2 (1328.5–3483) | 1 | 1 | 1 |
| IL-6, pg/mL | 3 (1.8–3.9) | 2 (1.2–5.6) | 12.4 (3.9–19.6) | 1 |
|
|
| Hx, mg/mL | 48.4 (28.4–72.7) | 49 (40.1–116.5) | 320.6 (136.9–440.4) | 0.374 |
|
|
| Hgl, mg/dL | 69 (33.6–127.3) | 116.8 (61.8–213.1) | 321.4 (147.05–425.3) | 0.543 |
|
|
| suPAR, ng/mL | 3413.5 (2497.8–4765.9) | 3421 (2703.3–4830) | 3444 (2373–4672.5) | 1 | 1 | 0.647 |
| uCD80, ng/mg creat | 32.3 (16.1–45.2) | 32.7 (6–56.5) | 37.2 (23–78.5) | 1 |
|
|
Values are expressed as median (interquartile range) 25–75th quartile unless otherwise specified. The bold values are the p values with stadistical significance (p<0.05).
Patient characteristics according to the response to corticosteroid treatment
| Variables | Cortico-sensitive, | Cortico-resistant, | P-value |
|---|---|---|---|
| Age, years | 34 (26–38) | 41 (23.3–54) | 0.34 |
| Gender: male, | 21 (56.8) | 16 (43.2) | 0.09 |
| Creatinine, mg/dL | 1 (0.9–1.2) | 1.2 (0.8–1.5) | 0.12 |
| eGFR, mL/min/1.73 m2 | 90 (81.8–107.6) | 85.9 (73.4–99.4) | 0.13 |
| Proteinuria, g/dL | 12.1 (8.2–14.5) | 9.9 (8.4–12.8) | 0.34 |
| Albumin, g/dL | 2.56 (2–2.8) | 2.41 (2–2.6) | 0,85 |
| Th1, % | 24 (22–26.5) | 22.5 (21–24.3) | 0.13 |
| TNFα, pg/mL | 8.7 (4.5–14.7) | 9 (5.7–15.1) | 0.62 |
| IFNγ, pg/mL | 14.4 (9.5–26.2) | 12.8 (5–24) | 0.28 |
| IL-12, pg/mL | 618 (483–716.5) | 726 (466–834) |
|
| Th2, % | 36 (30.5–59) | 34 (31.8–37.3) |
|
| IL-4, pg/mL | 3.6 (2.4–11.6) | 3.6 (1.9–4.6) |
|
| IL-13, pg/mL | 4.8 (2.4–9.5) | 3.9 (2–5.8) | 0.12 |
| IL-5, pg/mL | 4.2 (2.2–7.3) | 4.5 (2–5.9) | 0.13 |
| IgE, mg/mL | 51 (46.5–143) | 47 (45–77.3) | 0.16 |
| Th17, % | 3.1 (2.1–6.3) | 4.3 (2.4–25.9) | 0.18 |
| Th1–Th17, % | 6.5 (3.5–9.2) | 6.5 (4.3–14.7) | 0.07 |
| Treg, % | 2.7 (1.8–3.1) | 1.8 (0.8–2.6) | 0.06 |
| IL-17, pg/mL | 4.8 (2.3–9) | 9.8 (4.4–38.5) |
|
| IL-23, pg/mL | 33 (23–46) | 43 (29.8–56.9) |
|
| sIL1R, pg/mL | 2133.1 (1141.1–2916.6) | 2257.1 (1615.1–3185.7) | 0.63 |
| IL-6, pg/mL | 2.7 (1.2–8.5) | 10.7 (3–17) | 0.83 |
| Hx, mg/mL | 110.9 (46.3–152.9) | 114.5 (49–364.7) | 0.18 |
| Hgl, mg/dL | 116.8 (70.8–321.4) | 139.3 (99.5–371) | 0.37 |
| suPAR, ng/mL | 3421.8 (2407.5–4915.9) | 3206.7 (2457.1–4124.6) | 0.34 |
| uCD80, ng/mg creat | 34 (15.5–55.5) | 36.5 (17.6–81.8) | 0.17 |
Values are expressed as median (interquartile range) 25–75th quartile unless otherwise specified. The bold values are the p values with stadistical significance (p<0.05).
FIGURE 4:ROC curves to analyse the capacity of variables that showed significant differences in the univariate analysis to predict cortico-resistance.