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Literature DB >> 3422098

Identification of the human beta-actin enhancer and its binding factor.

T Kawamoto¹, K Makino, H Niwa, H Sugiyama, S Kimura, M Amemura, A Nakata, T Kakunaga.

Abstract

An enhancer of the human beta-actin gene and a factor that specifically interacts with it were detected. A mobility shift assay showed that the factor bound to the 25-base-pair sequence (between +759 and +783 downstream from the cap site) with high specificity. This finding correlated with those of DNase I protection and exonuclease III digestion assays. This binding region of the beta-actin enhancer contained a hyphenated dyad symmetry and an enhancer core-like sequence. In vitro competition experiments indicated that the factor did not bind to the simian virus 40 enhancer core region.

Entities: Gene Species

Mesh：

Substances：

Year: 1988 PMID： 3422098 PMCID： PMC363114 DOI： 10.1128/mcb.8.1.267-272.1988

Source DB: PubMed Journal: Mol Cell Biol ISSN： 0270-7306 Impact factor: 4.272

33 in total

1. DNAse footprinting: a simple method for the detection of protein-DNA binding specificity.

Authors: D J Galas; A Schmitz
Journal: Nucleic Acids Res Date: 1978-09 Impact factor: 16.971

2. A lymphoid-specific protein binding to the octamer motif of immunoglobulin genes.

Authors: L M Staudt; H Singh; R Sen; T Wirth; P A Sharp; D Baltimore
Journal: Nature Date: 1986 Oct 16-22 Impact factor: 49.962

3. A transcription factor which binds to the enhancers of SV40, immunoglobulin heavy chain and U2 snRNA genes.

Authors: D Bohmann; W Keller; T Dale; H R Schöler; G Tebb; I W Mattaj
Journal: Nature Date: 1987 Jan 15-21 Impact factor: 49.962

4. Distinct transcription factors bind specifically to two regions of the human histone H4 promoter.

Authors: L Dailey; S M Hanly; R G Roeder; N Heintz
Journal: Proc Natl Acad Sci U S A Date: 1986-10 Impact factor: 11.205

5. Purification of a cellular, double-stranded DNA-binding protein required for initiation of adenovirus DNA replication by using a rapid filter-binding assay.

Authors: J F Diffley; B Stillman
Journal: Mol Cell Biol Date: 1986-05 Impact factor: 4.272

6. A new technique for the assay of infectivity of human adenovirus 5 DNA.

Authors: F L Graham; A J van der Eb
Journal: Virology Date: 1973-04 Impact factor: 3.616

7. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.

Authors: M Fried; D M Crothers
Journal: Nucleic Acids Res Date: 1981-12-11 Impact factor: 16.971

8. Host-specific activation of transcription by tandem repeats from simian virus 40 and Moloney murine sarcoma virus.

Authors: L A Laimins; G Khoury; C Gorman; B Howard; P Gruss
Journal: Proc Natl Acad Sci U S A Date: 1982-11 Impact factor: 11.205

9. Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors: A M Maxam; W Gilbert
Journal: Methods Enzymol Date: 1980 Impact factor: 1.600

10. DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.

Authors: J L Manley; A Fire; A Cano; P A Sharp; M L Gefter
Journal: Proc Natl Acad Sci U S A Date: 1980-07 Impact factor: 11.205

27 in total

1. Diverse soybean actin transcripts contain a large intron in the 5' untranslated leader: structural similarity to vertebrate muscle actin genes.

Authors: L Pearson; R B Meagher
Journal: Plant Mol Biol Date: 1990-04 Impact factor: 4.076

2. Cell-specific transcription of the smooth muscle gamma-actin gene requires both positive- and negative-acting cis elements.

Authors: A M Kovacs; W E Zimmer
Journal: Gene Expr Date: 1998

Identification of the human beta-actin enhancer and its binding factor.

1. DNAse footprinting: a simple method for the detection of protein-DNA binding specificity.

2. A lymphoid-specific protein binding to the octamer motif of immunoglobulin genes.

3. A transcription factor which binds to the enhancers of SV40, immunoglobulin heavy chain and U2 snRNA genes.

4. Distinct transcription factors bind specifically to two regions of the human histone H4 promoter.

5. Purification of a cellular, double-stranded DNA-binding protein required for initiation of adenovirus DNA replication by using a rapid filter-binding assay.

6. A new technique for the assay of infectivity of human adenovirus 5 DNA.

7. Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis.

8. Host-specific activation of transcription by tandem repeats from simian virus 40 and Moloney murine sarcoma virus.

9. Sequencing end-labeled DNA with base-specific chemical cleavages.

10. DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.

1. Diverse soybean actin transcripts contain a large intron in the 5' untranslated leader: structural similarity to vertebrate muscle actin genes.

2. Cell-specific transcription of the smooth muscle gamma-actin gene requires both positive- and negative-acting cis elements.

Review 3. Tissue specific and vitamin D responsive gene expression in bone.

4. 5' flanking and first intron sequences of the human beta-actin gene required for efficient promoter activity.

5. Regulation of the human beta-actin promoter by upstream and intron domains.

6. Functional analysis of elements affecting expression of the beta-actin gene of carp.

7. Transcriptional insulation of the human keratin 18 gene in transgenic mice.

8. A common factor regulates skeletal and cardiac alpha-actin gene transcription in muscle.

9. Transcription factor binding and spacing constraints in the human beta-actin proximal promoter.

10. Natural and synthetic DNA elements with the CArG motif differ in expression and protein-binding properties.