Literature DB >> 34216325

The biobank of barretos cancer hospital: 14 years of experience in cancer research.

Ana Caroline Neuber1, Cássio Hoft Tostes1, Adeylson Guimarães Ribeiro2, Gabriella Taques Marczynski1, Tatiana Takahasi Komoto1, Caroline Domingues Rogeri1, Vinicius Duval da Silva1,3, Edmundo Carvalho Mauad2, Rui Manuel Reis1,4,5,6, Márcia M C Marques7,8,9.   

Abstract

Despite the developments in cancer research over years, cancer is still one of the leading causes of death worldwide. In Brazil, the number of cancer cases for the several next years (2020-2022) is expected to increase up to 625,000. Thus, translational research has been vital to determine the potential risk, prognostic, and predictive biomarkers in cancer. Therefore, Barretos Cancer Hospital implemented a biobank (BB-BCH) in 2006, which is responsible for processing, storage, and provision of biological materials from cancer and non-cancer participants. Hence, this article aimed to describe BB-BCH's history, experiences, and outcomes and explore its impact on Brazilian translational oncology research scenario. BB-BCH has a multidisciplinary team who are responsible for guaranteeing the quality of all processes as recommended by international guidelines for biobanks. Furthermore, BB-BCH has ample equipment to ensure the quality of all material requested by researchers as genetic material (DNA and RNA) and/or entire biospecimens. From 2006 to 2019, BB-BCH contained 252,069 samples from 44,933 participants, the whole collection is represented by 15 different types of biospecimens collected from them. According to our data, the most collected and stored topography in men is head and neck (29%); in women is breast (28%); and in children is torso and limb (27%) samples. Finally, we supported national and international consortia and projects such as The Cancer Genome Atlas. BB-BCH is a vital knowledge source for scientific community, enabling the development of high-quality studies, with a wide variety of tumor categories and high national representativeness of Brazilian population.
© 2021. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  Biobank; Biobanking; Brazil; Cancer Research; Personalized Medicine

Mesh:

Substances:

Year:  2021        PMID: 34216325     DOI: 10.1007/s10561-021-09941-9

Source DB:  PubMed          Journal:  Cell Tissue Bank        ISSN: 1389-9333            Impact factor:   1.522


  23 in total

1.  Standard preanalytical coding for biospecimens: defining the sample PREanalytical code.

Authors:  Fotini Betsou; Sylvain Lehmann; Garry Ashton; Michael Barnes; Erica E Benson; Domenico Coppola; Yvonne DeSouza; James Eliason; Barbara Glazer; Fiorella Guadagni; Keith Harding; David J Horsfall; Cynthia Kleeberger; Umberto Nanni; Anil Prasad; Kathi Shea; Amy Skubitz; Stella Somiari; Elaine Gunter
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-03-23       Impact factor: 4.254

2.  ISO/TC276/WG2 Biobanks and Bioresources: Draft International Standard Is Now Available for Comment.

Authors:  Clare M Allocca; Marianna J Bledsoe; Koh Furuta; Nilsa C Ramirez
Journal:  Biopreserv Biobank       Date:  2017-07-25       Impact factor: 2.300

3.  The effects of frozen tissue storage conditions on the integrity of RNA and protein.

Authors:  H Auer; J A Mobley; L W Ayers; J Bowen; R F Chuaqui; L A Johnson; V A Livolsi; I A Lubensky; D McGarvey; L C Monovich; C A Moskaluk; C A Rumpel; K C Sexton; M K Washington; K R Wiles; W E Grizzle; N C Ramirez
Journal:  Biotech Histochem       Date:  2014-05-06       Impact factor: 1.718

4.  Standardization and Innovation in Paving a Path to a Better Future: An Update of Activities in ISO/TC276/WG2 Biobanks and Bioresources.

Authors:  Koh Furuta; Clare M Allocca; Brent Schacter; Marianna J Bledsoe; Nilsa C Ramirez
Journal:  Biopreserv Biobank       Date:  2018-02-02       Impact factor: 2.300

5.  Toward a common language for biobanking.

Authors:  Martin N Fransson; Emmanuelle Rial-Sebbag; Mathias Brochhausen; Jan-Eric Litton
Journal:  Eur J Hum Genet       Date:  2014-04-09       Impact factor: 4.246

6.  Impact of Cold Ischemic Time and Freeze-Thaw Cycles on RNA, DNA and Protein Quality in Colorectal Cancer Tissues Biobanking.

Authors:  Xin-Juan Fan; Yan Huang; Pei-Huang Wu; Xin-Ke Yin; Xi-Hu Yu; Xin-Hui Fu; Li-Li Feng; Yun-Long Wang; Hong-Jun Yi; Zhi-Ting Chen; Jun-Xiang Yin; Da-Lu Zhang; Wei-Xing Feng; Shao-Mei Bai; Taewan Kim; Gordon B Mills; Yi-Ling Lu; Xiang-Bo Wan; Lei Wang
Journal:  J Cancer       Date:  2019-08-27       Impact factor: 4.207

7.  The Hospital de Câncer de Barretos Registry: an analysis of cancer survival at a single institution in Brazil over a 10-year period.

Authors:  Estela Cristina Carneseca; Edmundo Carvalho Mauad; Marcos Aurélio Alves de Araujo; Rafael Macrina Dalbó; Adhemar Longatto Filho; Vinicius de Lima Vazquez
Journal:  BMC Res Notes       Date:  2013-04-10

8.  Impact of delay to cryopreservation on RNA integrity and genome-wide expression profiles in resected tumor samples.

Authors:  Elodie Caboux; Maria Paciencia; Geoffroy Durand; Nivonirina Robinot; Magdalena B Wozniak; Françoise Galateau-Salle; Graham Byrnes; Pierre Hainaut; Florence Le Calvez-Kelm
Journal:  PLoS One       Date:  2013-11-20       Impact factor: 3.240

9.  Assays for Qualification and Quality Stratification of Clinical Biospecimens Used in Research: A Technical Report from the ISBER Biospecimen Science Working Group.

Authors:  Fay Betsou; Alexandre Bulla; Sang Yun Cho; Judith Clements; Rodrigo Chuaqui; Domenico Coppola; Yvonne De Souza; Annemieke De Wilde; William Grizzle; Fiorella Guadagni; Elaine Gunter; Stacey Heil; Verity Hodgkinson; Joseph Kessler; Michael Kiehntopf; Hee Sung Kim; Iren Koppandi; Katheryn Shea; Rajeev Singh; Marc Sobel; Stella Somiari; Demetri Spyropoulos; Mars Stone; Gunnel Tybring; Klara Valyi-Nagy; Gert Van den Eynden; Lalita Wadhwa
Journal:  Biopreserv Biobank       Date:  2016-04-05       Impact factor: 2.300

10.  The 2018 Revision of the ISBER Best Practices: Summary of Changes and the Editorial Team's Development Process.

Authors:  Lori D Campbell; Jonas J Astrin; Yvonne DeSouza; Judith Giri; Ashokkumar A Patel; Melissa Rawley-Payne; Amanda Rush; Nicole Sieffert
Journal:  Biopreserv Biobank       Date:  2018-02-02       Impact factor: 2.300

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  2 in total

1.  Somatic targeted mutation profiling of colorectal cancer precursor lesions.

Authors:  Wellington Dos Santos; Mariana Bisarro Dos Reis; Jun Porto; Ana Carolina de Carvalho; Marcus Matsushita; Gabriela Oliveira; Kari Syrjänen; Rui Manuel Reis; Denise Peixoto Guimarães
Journal:  BMC Med Genomics       Date:  2022-06-28       Impact factor: 3.622

2.  Cutaneous and acral melanoma cross-OMICs reveals prognostic cancer drivers associated with pathobiology and ultraviolet exposure.

Authors:  Zdenko Herceg; Vinicius de Lima Vazquez; Akram Ghantous; Anna Luiza Silva Almeida Vicente; Alexei Novoloaca; Vincent Cahais; Zainab Awada; Cyrille Cuenin; Natália Spitz; André Lopes Carvalho; Adriane Feijó Evangelista; Camila Souza Crovador; Rui Manuel Reis
Journal:  Nat Commun       Date:  2022-07-15       Impact factor: 17.694

  2 in total

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