Literature DB >> 34215651

Whole-exome sequencing reveals a monogenic cause in 56% of individuals with laterality disorders and associated congenital heart defects.

Yoav Bolkier1,2,3, Ortal Barel4,5, Dina Marek-Yagel2,3, Danit Atias-Varon6, Maayan Kagan2,6, Amir Vardi2,7, David Mishali2,8, Uriel Katz1,2, Yishay Salem1,2, Tal Tirosh-Wagner1,2, Jeffrey M Jacobson2,9, Annick Raas-Rothschild2,10, Odelia Chorin2,10, Aviva Eliyahu2,11, Yarden Sarouf2,12, Omer Shlomovitz2,12, Alvit Veber3, Nechama Shalva3, Elisheva Javasky4, Yishay Ben Moshe2,12, Orna Staretz-Chacham13, Gideon Rechavi2,5,14, Shrikant Mane15, Yair Anikster2,3,5, Asaf Vivante2,12,16, Ben Pode-Shakked17,3,12,16.   

Abstract

BACKGROUND: The molecular basis of heterotaxy and congenital heart malformations associated with disruption of left-right asymmetry is broad and heterogenous, with over 25 genes implicated in its pathogenesis thus far.
OBJECTIVE: We sought to elucidate the molecular basis of laterality disorders and associated congenital heart defects in a cohort of 30 unrelated probands of Arab-Muslim descent, using next-generation sequencing techniques.
METHODS: Detailed clinical phenotyping followed by whole-exome sequencing (WES) was pursued for each of the probands and their parents (when available). Sanger sequencing was used for segregation analysis of disease-causing mutations in the families.
RESULTS: Using WES, we reached a molecular diagnosis for 17 of the 30 probands (56.7%). Genes known to be associated with heterotaxy and/or primary ciliary dyskinesia, in which homozygous pathogenic or likely pathogenic variants were detected, included CFAP53 (CCDC11), CFAP298 (C21orf59), CFAP300, LRRC6, GDF1, DNAAF1, DNAH5, CCDC39, CCDC40, PKD1L1 and TTC25. Additionally, we detected a homozygous disease causing mutation in DAND5, as a novel recessive monogenic cause for heterotaxy in humans. Three additional probands were found to harbour variants of uncertain significance. These included variants in DNAH6, HYDIN, CELSR1 and CFAP46.
CONCLUSIONS: Our findings contribute to the current knowledge regarding monogenic causes of heterotaxy and its associated congenital heart defects and underscore the role of next-generation sequencing techniques in the diagnostic workup of such patients, and especially among consanguineous families. © Author(s) (or their employer(s)) 2022. No commercial re-use. See rights and permissions. Published by BMJ.

Entities:  

Keywords:  Hereditary; and neonatal diseases and abnormalities; congenital; heart defects

Mesh:

Substances:

Year:  2021        PMID: 34215651     DOI: 10.1136/jmedgenet-2021-107775

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   5.941


  6 in total

1.  Polygenic risk scores of endo-phenotypes identify the effect of genetic background in congenital heart disease.

Authors:  Sarah J Spendlove; Leroy Bondhus; Gentian Lluri; Jae Hoon Sul; Valerie A Arboleda
Journal:  HGG Adv       Date:  2022-04-25

2.  Consensus nomenclature for dyneins and associated assembly factors.

Authors:  Bryony Braschi; Heymut Omran; George B Witman; Gregory J Pazour; K Kevin Pfister; Elspeth A Bruford; Stephen M King
Journal:  J Cell Biol       Date:  2022-01-10       Impact factor: 8.077

3.  Spectrum of Genetic Variants in a Cohort of 37 Laterality Defect Cases.

Authors:  Dinu Antony; Elif Gulec Yilmaz; Alper Gezdirici; Lennart Slagter; Zeineb Bakey; Helen Bornaun; Ibrahim Cansaran Tanidir; Tran Van Dinh; Han G Brunner; Peter Walentek; Sebastian J Arnold; Rolf Backofen; Miriam Schmidts
Journal:  Front Genet       Date:  2022-04-13       Impact factor: 4.772

4.  De novo disruptive heterozygous MMP21 variants are potential predisposing genetic risk factors in Chinese Han heterotaxy children.

Authors:  Xi-Ji Qin; Meng-Meng Xu; Jia-Jun Ye; Yi-Wei Niu; Yu-Rong Wu; Rang Xu; Fen Li; Qi-Hua Fu; Sun Chen; Kun Sun; Yue-Juan Xu
Journal:  Hum Genomics       Date:  2022-09-19       Impact factor: 6.481

5.  CFAP300 mutation causing primary ciliary dyskinesia in Finland.

Authors:  Rüdiger Schultz; Varpu Elenius; Mahmoud R Fassad; Grace Freke; Andrew Rogers; Amelia Shoemark; Tiina Koistinen; Mai A Mohamed; Jacqueline S Y Lim; Hannah M Mitchison; Anu I Sironen
Journal:  Front Genet       Date:  2022-09-30       Impact factor: 4.772

6.  Subtyping children with asthma by clustering analysis of mRNA expression data.

Authors:  Ting Wang; Changhui He; Ming Hu; Honghua Wu; Shuteng Ou; Yuke Li; Chuping Fan
Journal:  Front Genet       Date:  2022-09-09       Impact factor: 4.772

  6 in total

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