Literature DB >> 34214530

The second law: information theory and self-assembly.

Govind Menon1.   

Abstract

An interplay between algorithmic and mechanistic viewpoints is necessary to quantify the rates of transition between different states in developmental pathways. An ab initio method that uses only information theory and geometry to model the conformational entropy of linkages is discussed. This approach also reveals some ties between biological questions and the foundations of mathematics.
Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2021        PMID: 34214530      PMCID: PMC8516636          DOI: 10.1016/j.bpj.2021.06.028

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   3.699


  17 in total

Review 1.  DNA in a material world.

Authors:  Nadrian C Seeman
Journal:  Nature       Date:  2003-01-23       Impact factor: 49.962

2.  Physical principles in the construction of regular viruses.

Authors:  D L CASPAR; A KLUG
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1962

3.  Surface tension-driven self-folding polyhedra.

Authors:  Timothy G Leong; Paul A Lester; Travis L Koh; Emma K Call; David H Gracias
Journal:  Langmuir       Date:  2007-07-04       Impact factor: 3.882

4.  Icosahedral DNA nanocapsules by modular assembly.

Authors:  Dhiraj Bhatia; Shabana Mehtab; Ramya Krishnan; Shantinath S Indi; Atanu Basu; Yamuna Krishnan
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

5.  Direct observation of the rotation of F1-ATPase.

Authors:  H Noji; R Yasuda; M Yoshida; K Kinosita
Journal:  Nature       Date:  1997-03-20       Impact factor: 49.962

Review 6.  The ATP synthase--a splendid molecular machine.

Authors:  P D Boyer
Journal:  Annu Rev Biochem       Date:  1997       Impact factor: 23.643

7.  Building polyhedra by self-assembly: theory and experiment.

Authors:  Ryan Kaplan; Joseph Klobušický; Shivendra Pandey; David H Gracias; Govind Menon
Journal:  Artif Life       Date:  2014-08-22       Impact factor: 0.667

8.  To build a virus capsid. An equilibrium model of the self assembly of polyhedral protein complexes.

Authors:  A Zlotnick
Journal:  J Mol Biol       Date:  1994-08-05       Impact factor: 5.469

9.  Supramolecular Archimedean cages assembled with 72 hydrogen bonds.

Authors:  Yuzhou Liu; Chunhua Hu; Angiolina Comotti; Michael D Ward
Journal:  Science       Date:  2011-07-22       Impact factor: 47.728

10.  Compactness determines the success of cube and octahedron self-assembly.

Authors:  Anum Azam; Timothy G Leong; Aasiyeh M Zarafshar; David H Gracias
Journal:  PLoS One       Date:  2009-02-12       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.