Literature DB >> 34209937

How Bacteria Change after Exposure to Silver Nanoformulations: Analysis of the Genome and Outer Membrane Proteome.

Anna Kędziora1, Mateusz Speruda1, Maciej Wernecki1, Bartłomiej Dudek1, Katarzyna Kapczynska2, Eva Krzyżewska2, Jacek Rybka2, Gabriela Bugla-Płoskońska1.   

Abstract

OBJECTIVE: the main purpose of this work was to compare the genetic and phenotypic changes of E. coli treated with silver nanoformulations (E. coli BW25113 wt, E. coli BW25113 AgR, E. coli J53, E. coli ATCC 11229 wt, E. coli ATCC 11229 var. S2 and E. coli ATCC 11229 var. S7). Silver, as the metal with promising antibacterial properties, is currently widely used in medicine and the biomedical industry, in both ionic and nanoparticles forms. Silver nanoformulations are usually considered as one type of antibacterial agent, but their physical and chemical properties determine the way of interactions with the bacterial cell, the mode of action, and the bacterial cell response to silver.
METHODS: the changes in the bacterial genome, resulting from the treatment of bacteria with various silver nanoformulations, were verified by analyzing of genes (selected with mutfunc) and their conservative and non-conservative mutations selected with BLOSUM62. The phenotype was verified using an outer membrane proteome analysis (OMP isolation, 2-DE electrophoresis, and MS protein identification).
RESULTS: the variety of genetic and phenotypic changes in E. coli strains depends on the type of silver used for bacteria treatment. The most changes were identified in E. coli ATCC 11229 treated with silver nanoformulation signed as S2 (E. coli ATCC 11229 var. S2). We pinpointed 39 genes encoding proteins located in the outer membrane, 40 genes of their regulators, and 22 genes related to other outer membrane structures, such as flagellum, fimbria, lipopolysaccharide (LPS), or exopolysaccharide in this strain. Optical density of OmpC protein in E. coli electropherograms decreased after exposure to silver nanoformulation S7 (noticed in E. coli ATCC 11229 var. S7), and increased after treatment with the other silver nanoformulations (SNF) marked as S2 (noticed in E. coli ATCC 11229 var. S2). Increase of FliC protein optical density was identified in turn after Ag+ treatment (noticed in E.coli AgR).
CONCLUSION: the results show that silver nanoformulations (SNF) exerts a selective pressure on bacteria causing both conservative and non-conservative mutations. The proteomic approach revealed that the levels of some proteins have changed after treatment with appropriate SNF.

Entities:  

Keywords:  Escherichia coli; OMP; SNF; bacteria; genome analysis; mutations; outer membrane proteins; pathogens; silver nanoformulations

Year:  2021        PMID: 34209937     DOI: 10.3390/pathogens10070817

Source DB:  PubMed          Journal:  Pathogens        ISSN: 2076-0817


  27 in total

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Authors:  S Henikoff; J G Henikoff
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

2.  Silver-resistant mutants of Escherichia coli display active efflux of Ag+ and are deficient in porins.

Authors:  X Z Li; H Nikaido; K E Williams
Journal:  J Bacteriol       Date:  1997-10       Impact factor: 3.490

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Authors:  P H O'Farrell
Journal:  J Biol Chem       Date:  1975-05-25       Impact factor: 5.157

Review 4.  Do physico-chemical properties of silver nanoparticles decide their interaction with biological media and bactericidal action? A review.

Authors:  Vikram Pareek; Rinki Gupta; Jitendra Panwar
Journal:  Mater Sci Eng C Mater Biol Appl       Date:  2018-05-01       Impact factor: 7.328

5.  Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing.

Authors:  Heewook Lee; Ellen Popodi; Haixu Tang; Patricia L Foster
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-18       Impact factor: 11.205

6.  Proteomic analysis of the mode of antibacterial action of silver nanoparticles.

Authors:  Chun-Nam Lok; Chi-Ming Ho; Rong Chen; Qing-Yu He; Wing-Yiu Yu; Hongzhe Sun; Paul Kwong-Hang Tam; Jen-Fu Chiu; Chi-Ming Che
Journal:  J Proteome Res       Date:  2006-04       Impact factor: 4.466

7.  Antibacterial effects of silver nanoparticles on gram-negative bacteria: influence on the growth and biofilms formation, mechanisms of action.

Authors:  M A Radzig; V A Nadtochenko; O A Koksharova; J Kiwi; V A Lipasova; I A Khmel
Journal:  Colloids Surf B Biointerfaces       Date:  2012-08-23       Impact factor: 5.268

8.  Antibacterial mechanism of silver nanoparticles in Pseudomonas aeruginosa: proteomics approach.

Authors:  Xueting Yan; Bin He; Lihong Liu; Guangbo Qu; Jianbo Shi; Ligang Hu; Guibin Jiang
Journal:  Metallomics       Date:  2018-04-25       Impact factor: 4.526

9.  Silver Nanoforms as a Therapeutic Agent for Killing Escherichia coli and Certain ESKAPE Pathogens.

Authors:  A Kedziora; K Korzekwa; W Strek; A Pawlak; W Doroszkiewicz; G Bugla-Ploskonska
Journal:  Curr Microbiol       Date:  2016-04-16       Impact factor: 2.188

10.  Comparison of Antibacterial Mode of Action of Silver Ions and Silver Nanoformulations With Different Physico-Chemical Properties: Experimental and Computational Studies.

Authors:  Anna Kędziora; Robert Wieczorek; Mateusz Speruda; Iva Matolínová; Tomasz M Goszczyński; Ireneusz Litwin; Vladimír Matolín; Gabriela Bugla-Płoskońska
Journal:  Front Microbiol       Date:  2021-07-01       Impact factor: 5.640

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