Literature DB >> 34206638

ISSR-Based Genetic Diversity Assessment of Genus Jasminum L. (Oleaceae) from Pakistan.

Naeem Akhtar1,2, Ishfaq Ahmad Hafiz1, Muhammad Qasim Hayat3, Daniel Potter2, Nadeem Akhtar Abbasi1, Umer Habib1, Adil Hussain4, Hina Hafeez5, Muhammad Ajmal Bashir1,6, Saad Imran Malik7.   

Abstract

The genus Jasminum L., of the family Oleaceae, includes many species occurring in the wild, or cultivated worldwide. A preliminary investigation based on inter-simple sequence repeats (ISSR) was performed to assess the genetic diversity among 28 accessions, representing nine species of Jasminum from various regions, representing a range of altitudes in Pakistan. A total of 21 ISSR primers were used, which produced 570 amplified bands of different sizes, with a mean polymorphic band percentage of 98.26%. The maximum resolving power, polymorphism information content, and index values of the ISSR markers recorded for primers 6, 16, and 19 were 0.40, 12.32, and 24.21, respectively. Based on the data of the ISSR markers, the resulting UPGMA dendrogram with the Jaccard coefficient divided the 28 accessions into two main clades. At the species level, the highest values for Shannon's information index, polymorphism percentage, effective allele number, Nei's genetic variations, and genetic unbiased diversity were found in Jasminum sambac L. and J. humile L., while the lowest were observed in J. mesnyi Hance and J. nitidum Skan. Based on Nei's unbiased genetic identity pairwise population matrix, the maximum identity (0.804) was observed between J. elongatum Willd and J. multiflorum (Burm. f.) Andrews, and the lowest (0.566) between J. nitidum Skan. and J. azoricum L. Molecular variance analysis displayed a genetic variation of 79% among the nine populations. The study was aimed to established genetic diversity in Jasminum species using ISSR markers. With the help of this technique, we were able to establish immense intra- and interspecific diversity across the Jasminum species.

Entities:  

Keywords:  ISSR; Jasminum L.; Pakistan; genetic diversity; polymorphism

Year:  2021        PMID: 34206638     DOI: 10.3390/plants10071270

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  7 in total

1.  Phylogeny and classification of Oleaceae based on rps16 and trnL-F sequence data.

Authors:  E Wallander; V A Albert
Journal:  Am J Bot       Date:  2000-12       Impact factor: 3.844

2.  Estimation of average heterozygosity and genetic distance from a small number of individuals.

Authors:  M Nei
Journal:  Genetics       Date:  1978-07       Impact factor: 4.562

3.  Phylogenetic analysis and evolution of morphological characters in the genus Jasminum L. (Oleaceae) in India.

Authors:  J Nirmala Jeyarani; Regy Yohannan; Devipriya Vijayavalli; Mayank D Dwivedi; Arun K Pandey
Journal:  J Genet       Date:  2018-12       Impact factor: 1.166

4.  Sequential variation in the components of reproductive success in the distylousJasminum fruticans (Oleaceae).

Authors:  John D Thompson; Bertrand Dommée
Journal:  Oecologia       Date:  1993-07       Impact factor: 3.225

5.  Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification.

Authors:  E Zietkiewicz; A Rafalski; D Labuda
Journal:  Genomics       Date:  1994-03-15       Impact factor: 5.736

6.  Application of ISSR markers to analyze molecular relationships in Iranian jasmine (Jasminum spp.) accessions.

Authors:  Masood Ghasemi Ghehsareh; Hassan Salehi; Morteza Khosh-Khui; Ali Niazi
Journal:  Mol Biotechnol       Date:  2015-01       Impact factor: 2.695

7.  Gene relocations within chloroplast genomes of Jasminum and Menodora (Oleaceae) are due to multiple, overlapping inversions.

Authors:  Hae-Lim Lee; Robert K Jansen; Timothy W Chumley; Ki-Joong Kim
Journal:  Mol Biol Evol       Date:  2007-02-28       Impact factor: 16.240

  7 in total

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