Literature DB >> 34206177

Nearly Identical Plasmids Encoding VIM-1 and Mercury Resistance in Enterobacteriaceae from North-Eastern Germany.

Stefan E Heiden1, Katharina Sydow1, Stephan Schaefer2, Ingo Klempien3, Veronika Balau4, Peter Bauer5, Nils-Olaf Hübner6, Katharina Schaufler1.   

Abstract

The emergence of carbapenemase-producing Enterobacteriaceae limits therapeutic options and presents a major public health problem. Resistances to carbapenems are mostly conveyed by metallo-beta-lactamases (MBL) including VIM, which are often encoded on resistance plasmids. We characterized four VIM-positive isolates that were obtained as part of a routine diagnostic screening from two laboratories in north-eastern Germany between June and August 2020. Whole-genome sequencing was performed to address (a) phylogenetic properties, (b) plasmid content, and (c) resistance gene carriage. In addition, we performed phenotypic antibiotic and mercury resistance analyses. The genomic analysis revealed three different bacterial species including C. freundii, E. coli and K. oxytoca with four different sequence types. All isolates were geno- and phenotypically multidrug-resistant (MDR) and the phenotypic profile was explained by the underlying resistance gene content. Three isolates of four carried nearly identical VIM-1-resistance plasmids, which in addition encoded a mercury resistance operon and showed some similarity to two publicly available plasmid sequences from sources other than the two laboratories above. Our results highlight the circulation of a nearly identical IncN-type VIM-1-resistance plasmid in different Enterobacteriaceae in north-eastern Germany.

Entities:  

Keywords:  Enterobacteriaceae; IncN; VIM; mercury; resistance

Year:  2021        PMID: 34206177     DOI: 10.3390/microorganisms9071345

Source DB:  PubMed          Journal:  Microorganisms        ISSN: 2076-2607


  29 in total

1.  Multilocus sequence typing of IncN plasmids.

Authors:  Aurora García-Fernández; Laura Villa; Arshnee Moodley; Henrik Hasman; Vivi Miriagou; Luca Guardabassi; Alessandra Carattoli
Journal:  J Antimicrob Chemother       Date:  2011-06-08       Impact factor: 5.790

Review 2.  Transposon Tn21, flagship of the floating genome.

Authors:  C A Liebert; R M Hall; A O Summers
Journal:  Microbiol Mol Biol Rev       Date:  1999-09       Impact factor: 11.056

3.  Mercury resistance transposons of gram-negative environmental bacteria and their classification.

Authors:  S Mindlin; G Kholodii; Z Gorlenko; S Minakhina; L Minakhin; E Kalyaeva; A Kopteva; M Petrova; O Yurieva; V Nikiforov
Journal:  Res Microbiol       Date:  2001-11       Impact factor: 3.992

4.  Ongoing epidemic of blaVIM-1-positive Klebsiella pneumoniae in Athens, Greece: a prospective survey.

Authors:  M Psichogiou; P T Tassios; A Avlamis; I Stefanou; C Kosmidis; E Platsouka; O Paniara; A Xanthaki; M Toutouza; G L Daikos; L S Tzouvelekis
Journal:  J Antimicrob Chemother       Date:  2007-11-13       Impact factor: 5.790

5.  The Sequence Alignment/Map format and SAMtools.

Authors:  Heng Li; Bob Handsaker; Alec Wysoker; Tim Fennell; Jue Ruan; Nils Homer; Gabor Marth; Goncalo Abecasis; Richard Durbin
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

6.  Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.

Authors:  Bruce J Walker; Thomas Abeel; Terrance Shea; Margaret Priest; Amr Abouelliel; Sharadha Sakthikumar; Christina A Cuomo; Qiandong Zeng; Jennifer Wortman; Sarah K Young; Ashlee M Earl
Journal:  PLoS One       Date:  2014-11-19       Impact factor: 3.240

7.  Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Authors:  Ryan R Wick; Louise M Judd; Claire L Gorrie; Kathryn E Holt
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

8.  Identification of Novel Mobilized Colistin Resistance Gene mcr-9 in a Multidrug-Resistant, Colistin-Susceptible Salmonella enterica Serotype Typhimurium Isolate.

Authors:  Laura M Carroll; Ahmed Gaballa; Claudia Guldimann; Genevieve Sullivan; Lory O Henderson; Martin Wiedmann
Journal:  mBio       Date:  2019-05-07       Impact factor: 7.867

9.  The mercury resistance operon: from an origin in a geothermal environment to an efficient detoxification machine.

Authors:  Eric S Boyd; Tamar Barkay
Journal:  Front Microbiol       Date:  2012-10-08       Impact factor: 5.640

10.  ESBL-plasmids carrying toxin-antitoxin systems can be "cured" of wild-type Escherichia coli using a heat technique.

Authors:  Katharina Schaufler; Lothar H Wieler; Torsten Semmler; Christa Ewers; Sebastian Guenther
Journal:  Gut Pathog       Date:  2013-11-19       Impact factor: 4.181

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