Literature DB >> 34204662

Characterization of Circulating T Cell Receptor Repertoire Provides Information about Clinical Outcome after PD-1 Blockade in Advanced Non-Small Cell Lung Cancer Patients.

Ning Dong1, Andrea Moreno-Manuel1,2, Silvia Calabuig-Fariñas1,2,3,4, Sandra Gallach1,2,3, Feiyu Zhang1, Ana Blasco2,3,5, Francisco Aparisi6, Marina Meri-Abad5, Ricardo Guijarro2,3,7,8, Rafael Sirera2,3,9, Carlos Camps1,2,3,5,10, Eloísa Jantus-Lewintre1,2,3,9.   

Abstract

Despite the success of immunotherapies in lung cancer, development of new biomarkers for patient selection is urgently needed. This study aims to explore minimally invasive approaches to characterize circulating T cell receptor beta chain (TCR-β) repertoire in a cohort of advanced non-small cell lung cancer (NSCLC) patients treated with first-line pembrolizumab. Peripheral blood samples were obtained at two time points: i) pretreatment (PRE) and ii) first response assessment (FR). Next-generation sequencing (NGS) was used to analyze the hypervariable complementary determining region 3 (CDR3) of TCR-β chain. Richness, evenness, convergence, and Jaccard similarity indexes plus variable (V) and joining (J)-gene usage were studied. Our results revealed that increased richness during treatment was associated with durable clinical benefit (DCB; p = 0.046), longer progression-free survival (PFS; p = 0.007) and overall survival (OS; p = 0.05). Patients with Jaccard similarity index ≥0.0605 between PRE and FR samples showed improved PFS (p = 0.021). Higher TRBV20-1 PRE usage was associated with DCB (p = 0.027). TRBV20-1 levels ≥9.14% in PRE and ≥9.02% in FR significantly increased PFS (p = 0.025 and p = 0.016) and OS (p = 0.035 and p = 0.018). Overall, analysis of circulating TCR-β repertoire may provide information about the immune response in anti-PD-1 treated NSCLC patients; in this scenario, it can also offer important information about the clinical outcome.

Entities:  

Keywords:  CDR3; T cell receptor beta chain repertoire; TCR; biomarker; high-throughput sequencing; immune checkpoint blockade; immunotherapy; liquid biopsy; next-generation sequencing; non-small cell lung cancer

Year:  2021        PMID: 34204662     DOI: 10.3390/cancers13122950

Source DB:  PubMed          Journal:  Cancers (Basel)        ISSN: 2072-6694            Impact factor:   6.639


  4 in total

1.  The impact of radiation therapy on the TCR Vβ chain repertoire in patients with prostate cancer.

Authors:  Maria Goulielmaki; Nikolaos Davanos; Paraskevi Kogionou; Panagiota Batsaki; Savvas Stokidis; Maria Adamaki; Eftychia Mosa; Evanthia Vasilakou; Charalambos Zambatis; Angelos D Gritzapis; Vassilios Zoumpourlis; Constantin N Baxevanis; Sotirios P Fortis
Journal:  Int J Oncol       Date:  2022-04-21       Impact factor: 5.884

Review 2.  Revealing Clonal Responses of Tumor-Reactive T-Cells Through T Cell Receptor Repertoire Analysis.

Authors:  Hiroyasu Aoki; Shigeyuki Shichino; Kouji Matsushima; Satoshi Ueha
Journal:  Front Immunol       Date:  2022-01-27       Impact factor: 7.561

3.  Novel Ensemble Feature Selection Approach and Application in Repertoire Sequencing Data.

Authors:  Tao He; Jason Min Baik; Chiemi Kato; Hai Yang; Zenghua Fan; Jason Cham; Li Zhang
Journal:  Front Genet       Date:  2022-04-26       Impact factor: 4.772

4.  Comprehensive analysis of T cell receptor repertoire in patients with KRAS mutant non-small cell lung cancer.

Authors:  Yadong Wang; Ling Peng; Ming Zhao; Yuanyuan Xiong; Jianchao Xue; Bowen Li; Zhicheng Huang; Xinyu Liu; Xiaoying Yang; Yang Song; Zhongxing Bing; Chao Guo; Zhenhuan Tian; Chao Gao; Lei Cao; Zhili Cao; Ji Li; Xu Jiang; Xiaoyan Si; Li Zhang; Xiaoguang Li; Zhibo Zheng; Mengmeng Song; Rongrong Chen; Wan-Teck Lim; Alberto Pavan; Atocha Romero; Naixin Liang; Huaxia Yang; Shanqing Li
Journal:  Transl Lung Cancer Res       Date:  2022-09
  4 in total

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