Literature DB >> 34196789

Structural and evolutionary exploration of the IL-3 family and its alpha subunit receptors.

Jade Fogha1,2,3, Jagadeesh Bayry4,5, Julien Diharce6,7,8, Alexandre G de Brevern9,10,11,12.   

Abstract

Interleukin-3 (IL-3) is a cytokine belonging to the family of common β (βc) and is involved in various biological systems. Its activity is mediated by the interaction with its receptor (IL-3R), a heterodimer composed of two distinct subunits: IL-3Rα and βc. IL-3 and its receptor, especially IL-3Rα, play a crucial role in pathologies like inflammatory diseases and therefore are interesting therapeutic targets. Here, we have performed an analysis of these proteins and their interaction based on structural and evolutionary information. We highlighted that IL-3 and IL-3Rα structural architectures are conserved across evolution and shared with other proteins belonging to the same βc family interleukin-5 (IL-5) and granulocyte-macrophage colony-stimulating factor (GM-CSF). The IL-3Rα/IL-3 interaction is mediated by a large interface in which most residues are surprisingly not conserved during evolution and across family members. In spite of this high variability, we suggested small regions constituted by few residues conserved during the evolution in both proteins that could be important for the binding affinity.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.

Entities:  

Keywords:  Evolutionary conservation; IL-3; IL-3Rα; Protein structures; Protein–-protein interactions

Mesh:

Substances:

Year:  2021        PMID: 34196789     DOI: 10.1007/s00726-021-03026-3

Source DB:  PubMed          Journal:  Amino Acids        ISSN: 0939-4451            Impact factor:   3.520


  45 in total

1.  Gleaning non-trivial structural, functional and evolutionary information about proteins by iterative database searches.

Authors:  L Aravind; E V Koonin
Journal:  J Mol Biol       Date:  1999-04-16       Impact factor: 5.469

2.  WebLogo: a sequence logo generator.

Authors:  Gavin E Crooks; Gary Hon; John-Marc Chandonia; Steven E Brenner
Journal:  Genome Res       Date:  2004-06       Impact factor: 9.043

3.  A dissection of specific and non-specific protein-protein interfaces.

Authors:  Ranjit Prasad Bahadur; Pinak Chakrabarti; Francis Rodier; Joël Janin
Journal:  J Mol Biol       Date:  2004-02-27       Impact factor: 5.469

4.  Structural design and molecular evolution of a cytokine receptor superfamily.

Authors:  J F Bazan
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

5.  Conformational Changes in the GM-CSF Receptor Suggest a Molecular Mechanism for Affinity Conversion and Receptor Signaling.

Authors:  Sophie E Broughton; Timothy R Hercus; Tracy L Nero; Mara Dottore; Barbara J McClure; Urmi Dhagat; Houng Taing; Michael A Gorman; Jack King-Scott; Angel F Lopez; Michael W Parker
Journal:  Structure       Date:  2016-07-07       Impact factor: 5.006

6.  Dual mechanism of interleukin-3 receptor blockade by an anti-cancer antibody.

Authors:  Sophie E Broughton; Timothy R Hercus; Matthew P Hardy; Barbara J McClure; Tracy L Nero; Mara Dottore; Huy Huynh; Hal Braley; Emma F Barry; Winnie L Kan; Urmi Dhagat; Pierre Scotney; Dallas Hartman; Samantha J Busfield; Catherine M Owczarek; Andrew D Nash; Nicholas J Wilson; Michael W Parker; Angel F Lopez
Journal:  Cell Rep       Date:  2014-07-17       Impact factor: 9.423

Review 7.  The βc receptor family - Structural insights and their functional implications.

Authors:  Sophie E Broughton; Tracy L Nero; Urmi Dhagat; Winnie L Kan; Timothy R Hercus; Denis Tvorogov; Angel F Lopez; Michael W Parker
Journal:  Cytokine       Date:  2015-05-14       Impact factor: 3.861

8.  Role of disulfide bridges in determining the biological activity of interleukin 3.

Authors:  I Clark-Lewis; L E Hood; S B Kent
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

9.  ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules.

Authors:  Haim Ashkenazy; Shiran Abadi; Eric Martz; Ofer Chay; Itay Mayrose; Tal Pupko; Nir Ben-Tal
Journal:  Nucleic Acids Res       Date:  2016-05-10       Impact factor: 16.971

10.  A dual role for the N-terminal domain of the IL-3 receptor in cell signalling.

Authors:  Sophie E Broughton; Timothy R Hercus; Tracy L Nero; Winnie L Kan; Emma F Barry; Mara Dottore; Karen S Cheung Tung Shing; Craig J Morton; Urmi Dhagat; Matthew P Hardy; Nicholas J Wilson; Matthew T Downton; Christine Schieber; Timothy P Hughes; Angel F Lopez; Michael W Parker
Journal:  Nat Commun       Date:  2018-01-26       Impact factor: 14.919

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  1 in total

1.  IFN-γ Induces PD-L1 Expression in Primed Human Basophils.

Authors:  Srinivasa Reddy Bonam; Camille Chauvin; Mano J Mathew; Jagadeesh Bayry
Journal:  Cells       Date:  2022-02-25       Impact factor: 6.600

  1 in total

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