| Literature DB >> 34194533 |
Jun Zhao1, Ping Leng1, Wen Xu1, Jia-Lin Sun1, Bei-Bei Ni1, Guang-Wei Liu2.
Abstract
OBJECTIVE: To explore the mechanisms of ursolic acid for treating colon cancer based on network pharmacology.Entities:
Year: 2021 PMID: 34194533 PMCID: PMC8203398 DOI: 10.1155/2021/9980949
Source DB: PubMed Journal: Evid Based Complement Alternat Med ISSN: 1741-427X Impact factor: 2.629
Figure 1Venn diagram of potential targets of ursolic acid and colon cancer.
Figure 2PPI analysis of intersection targets between ursolic acid and colon cancer related targets.
Topological analysis of the targets of ursolic acid on colon cancer (top 20).
| Name | Degree | Betweenness centrality | Closeness centrality | Clustering coefficient | Eccentricity | Radiality | Topological coefficient |
|---|---|---|---|---|---|---|---|
| IL6 | 70 | 0.112 | 0.709 | 0.337 | 4 | 0.932 | 0.256 |
| MAPK3 | 63 | 0.061 | 0.675 | 0.391 | 4 | 0.920 | 0.274 |
| VEGFA | 59 | 0.044 | 0.647 | 0.437 | 4 | 0.909 | 0.290 |
| PTGS2 | 57 | 0.054 | 0.655 | 0.435 | 4 | 0.912 | 0.284 |
| CASP3 | 55 | 0.025 | 0.615 | 0.486 | 5 | 0.896 | 0.316 |
| TNF | 54 | 0.024 | 0.636 | 0.481 | 4 | 0.905 | 0.302 |
| MAPK8 | 54 | 0.025 | 0.636 | 0.488 | 4 | 0.905 | 0.300 |
| CCND1 | 53 | 0.045 | 0.619 | 0.470 | 4 | 0.897 | 0.307 |
| JUN | 52 | 0.027 | 0.619 | 0.506 | 4 | 0.897 | 0.318 |
| STAT3 | 51 | 0.033 | 0.612 | 0.515 | 4 | 0.894 | 0.323 |
| ESR1 | 49 | 0.037 | 0.609 | 0.474 | 4 | 0.893 | 0.309 |
| FOS | 48 | 0.023 | 0.609 | 0.543 | 4 | 0.893 | 0.329 |
| IL1B | 46 | 0.022 | 0.609 | 0.506 | 4 | 0.893 | 0.304 |
| RELA | 43 | 0.018 | 0.583 | 0.570 | 5 | 0.881 | 0.342 |
| CREB1 | 42 | 0.043 | 0.589 | 0.480 | 5 | 0.884 | 0.316 |
| MMP9 | 42 | 0.007 | 0.580 | 0.649 | 4 | 0.879 | 0.360 |
| BCL2L1 | 42 | 0.007 | 0.577 | 0.626 | 4 | 0.878 | 0.356 |
| PPARG | 41 | 0.027 | 0.583 | 0.479 | 4 | 0.881 | 0.314 |
| MMP2 | 40 | 0.009 | 0.577 | 0.650 | 4 | 0.878 | 0.359 |
| AR | 40 | 0.037 | 0.577 | 0.490 | 4 | 0.878 | 0.323 |
Figure 3The top 20 significant targets for intersection targets between ursolic acid and colon cancer.
Figure 4Survival analysis of part of target genes (P < 0.05). (a) VEGFA (P value = 0.0072). (b) PTGS2 (P value = 0.0357). (c) CASP3 (P value = 0.0154).
Figure 5Histogram of GO functional enrichment analysis.
Figure 6Bubble diagram of GO functional enrichment analysis.
Figure 7The top 20 significant enriched KEGG pathways for intersection target (histogram).
Figure 8The top 20 significant enriched KEGG pathways for intersection target (bubble diagram).
The top 20 significant enriched KEGG pathways for intersection target.
| Description |
| Count | Gene ID |
|---|---|---|---|
| TNF signaling pathway | 1.68 | 19 | MAPK3/PTGS2/TNF/MMP3/RELA/FOS/MMP9/JUN/IL6/CASP3/MAPK8/NFKBIA/CASP8/ICAM1/IL1B/CREB1/SELE/ATF2/CSF2 |
| AGE-RAGE signaling pathway in diabetic complications | 3.75 | 18 | MAPK3/TNF/MMP2/RELA/STAT3/VEGFA/CCND1/BCL2/BAX/JUN/IL6/CASP3/MAPK8/ICAM1/IL1B/SELE/NOS3/CDK4 |
| Human cytomegalovirus infection | 7.12 | 24 | MAPK3/PTGER2/PTGS2/PTGER4/TNF/MDM2/RELA/STAT3/VEGFA/CCND1/CDKN1A/BAX/CASP9/IL6/CASP3/NFKBIA/CASP8/IL1B/CREB1/PRKCG/ATF2/FASLG/CDK4/CDK6 |
| Hepatitis B | 1.09 | 21 | MAPK3/TNF/RELA/STAT3/BCL2/FOS/CDKN1A/BAX/CASP9/MMP9/JUN/IL6/CASP3/MAPK8/NFKBIA/CASP8/CREB1/PRKCG/ATF2/BIRC5/FASLG |
| Kaposi sarcoma-associated herpesvirus infection | 3.32 | 22 | MAPK3/PTGS2/RELA/STAT3/VEGFA/CCND1/FOS/CDKN1A/BAX/CASP9/JUN/IL6/CASP3/MAPK8/NFKBIA/CASP8/ICAM1/CREB1/CSF2/CDK4/CDK6/FGF2 |
| IL-17 signaling pathway | 4.70 | 16 | MAPK3/PTGS2/TNF/MMP3/MMP1/RELA/FOS/MMP9/JUN/IL6/CASP3/MAPK8/NFKBIA/CASP8/IL1B/CSF2 |
| Measles | 1.51 | 18 | RELA/STAT3/CCND1/BCL2/BCL2L1/FOS/BAX/CASP9/JUN/IL6/CASP3/MAPK8/NFKBIA/CASP8/IL1B/FASLG/CDK4/CDK6 |
| Apoptosis | 1.38 | 17 | MAPK3/TNF/CTSB/RELA/BCL2/BCL2L1/FOS/BAX/CASP9/JUN/CASP3/MAPK8/NFKBIA/CASP8/MCL1/BIRC5/FASLG |
| Prostate cancer | 2.09 | 14 | AR/MAPK3/SRD5A2/MMP3/MDM2/PLAU/RELA/CCND1/BCL2/CDKN1A/CASP9/MMP9/NFKBIA/CREB1 |
| Endocrine resistance | 2.41 | 14 | MAPK3/ESR2/ESR1/MMP2/MDM2/CCND1/BCL2/FOS/CDKN1A/BAX/MMP9/JUN/MAPK8/CDK4 |
| Human T-cell leukemia virus 1 infection | 4.25 | 19 | POLB/TERT/MAPK3/TNF/RELA/CCND1/BCL2L1/FOS/CDKN1A/BAX/JUN/IL6/MAPK8/NFKBIA/ICAM1/CREB1/ATF2/CSF2/CDK4 |
| Epstein-Barr virus infection | 9.41 | 18 | TNF/MDM2/RELA/STAT3/CCND1/BCL2/CDKN1A/BAX/CASP9/JUN/IL6/CASP3/MAPK8/NFKBIA/CASP8/ICAM1/CDK4/CDK6 |
| Platinum drug resistance | 1.29 | 12 | TOP2A/MAPK3/MDM2/BCL2/BCL2L1/CDKN1A/BAX/CASP9/CASP3/CASP8/BIRC5/FASLG |
| Small cell lung cancer | 1.51 | 13 | NOS2/PTGS2/RELA/CCND1/BCL2/BCL2L1/CDKN1A/BAX/CASP9/CASP3/NFKBIA/CDK4/CDK6 |
| Hepatitis C | 1.55 | 16 | NR1H3/PPARA/MAPK3/TNF/RELA/STAT3/CCND1/CDKN1A/BAX/CASP9/CASP3/NFKBIA/CASP8/FASLG/CDK4/CDK6 |
| Pancreatic cancer | 2.11 | 12 | MAPK3/RELA/STAT3/VEGFA/CCND1/BCL2L1/CDKN1A/BAX/CASP9/MAPK8/CDK4/CDK6 |
| Relaxin signaling pathway | 1.03 | 14 | MAPK3/NOS2/MMP1/MMP2/RELA/VEGFA/FOS/MMP9/JUN/MAPK8/NFKBIA/CREB1/ATF2/NOS3 |
| Toxoplasmosis | 1.85 | 13 | MAPK3/NOS2/ALOX5/TNF/RELA/STAT3/BCL2/BCL2L1/CASP9/CASP3/MAPK8/NFKBIA/CASP8 |
| Bladder cancer | 2.00 | 9 | MAPK3/MMP1/MMP2/MDM2/VEGFA/CCND1/CDKN1A/MMP9/CDK4 |
| p53 signaling pathway | 2.10 | 11 | MDM2/CCND1/BCL2/BCL2L1/CDKN1A/BAX/CASP9/CASP3/CASP8/CDK4/CDK6 |
Figure 9Ursolic-acid key-target main-pathway colon cancer network. Note: as shown in the figure, blue represented the ursolic acid compound, yellow represented the targets of traditional Chinese medicine components acting on the disease, green represented the most significant first 20 pathways, and red represented the disease, namely colon cancer.