| Literature DB >> 34191632 |
Sarah N Bevins1, Jeffrey C Chandler1, Nicole Barrett1, Brandon S Schmit2, Gerald W Wiscomb3, Susan A Shriner1.
Abstract
Plague is caused by a bacterial pathogen (Yersinia pestis) that can infect a wide range of mammal species, but its presence in wildlife is often underappreciated. Using a large-scale data set (n = 44,857) that details the extent of Y. pestis exposure in wildlife, we document exposure in 18 wildlife species, including coyotes (Canis latrans), bobcats (Lynx rufus), and black bears (Ursus americanus). Evidence of plague activity is widespread, with seropositive animals detected in every western state in the contiguous United States. Pathogen monitoring systems in wildlife that are both large scale and long-term are rare, yet they open the door for analyses on potential shifts in distribution that have occurred over time because of climate or land use changes. The data generated by these long-term monitoring programs, combined with recent advances in our understanding of pathogen ecology, offer a clearer picture of zoonotic pathogens and the risks they pose.Entities:
Keywords: Yersinia pestis; coyote; pathogen; sentinel; spillover
Mesh:
Year: 2021 PMID: 34191632 PMCID: PMC8563452 DOI: 10.1089/vbz.2020.2765
Source DB: PubMed Journal: Vector Borne Zoonotic Dis ISSN: 1530-3667 Impact factor: 2.133
Published Estimates Used to Determine Informative Priors
| Passive hemagglutination assay | Bead-based flow cytometric assay | |||
|---|---|---|---|---|
| Sensitivity | Specificity | Sensitivity | Specificity | |
| Estimate | 0.81 | 0.98 | 0.94 | 0.96 |
| Citation | Marshall et al. ( | Marshall et al. ( | Chandler et al. ( | Chandler et al. ( |
| Prior | Beta (95% sure that se >0.6 with mode = 0.81) | Beta (95% sure that sp >0.8 with mode = 0.98) | Beta (95% sure that se >0.85 with mode = 0.94) | Beta (95% sure that sp >0.7 with mode = 0.96) |
| A | 13.677 | 15.798 | 23.788 | 10.199 |
| B | 3.954 | 1.302 | 2.454 | 1.383 |
Samples Sizes and True Seroprevalence of Wildlife Species Screened for Yersinia pestis Antibodies
| Species | Scientific name | n | % Mean true prevalence (95% credible interval) |
|---|---|---|---|
| Wolverine |
| 1 | 63.9 (10–99) |
| Kit Fox |
| 12 | 18.8 (1–54) |
| Gray wolf |
| 551 | 14.3 (3–23) |
| Black-tailed Prairie dog |
| 32 | 11.2 (1–31) |
| Gray fox |
| 248 | 9.8 (1–21) |
| Coyote |
| 35866 | 8.5 (1–17) |
| American Badger |
| 159 | 7.0 (0–16) |
| Swift fox |
| 23 | 6.7 (0–21) |
| Black bear |
| 486 | 4.3 (0–10) |
| Bobcat |
| 366 | 3.2 (0–8) |
| Mountain lion |
| 388 | 3.2 (0–8) |
| Red fox |
| 531 | 3.1 (0–8) |
| Feral swine |
| 484 | 2.0 (0–5) |
| Cottontail rabbit |
| 183 | 1.0 (0–4) |
| Other | 853 | 0.5 (0–2) | |
| Striped skunk |
| 698 | 0.5 (0–2) |
| Raccoon |
| 1386 | 0.4 (0–1) |
| North American beaver |
| 1568 | 0.1 (0–1) |
Species with 0 positives: Nutria (Myocastor coypus, n = 200), jackrabbit (Lepus sp. n = 186), muskrat (Ondatra zibethicus, n = 88), desert woodrat (Neotoma lepida, n = 65), Virginia opossum (Didelphis virginiana, n = 64), hooded skunk (Mephitis macrouran, n = 39), deer mouse (Peromyscus maniculatus, n = 34), cactus mouse (Peromyscus eremicus, n = 30), North American river otter (Lontra canadensis, n = 25), rock squirrel (Otospermophilus variegatus, n = 24), Merriam's kangaroo rat (Dipodomys merriami, n = 23), Pinyon mouse (Peromyscus truei, n = 23), round-tailed ground squirrel (Xerospermophilus tereticaudus, n = 20), black rat (Rattus rattus, n = 19), Fisher (Pekania pennanti, n = 18), eastern cottontail rabbit (Sylvilagus floridanus, n = 15), California ground squirrel (Otospermophilus beecheyi, n = 14), white-throated woodrat (Neotoma albigula, n = 14), house mouse (Mus musculus, n = 13), white-lipped peccary (Tayassu pecari, n = 13), kangaroo mouse (Microdipodops, n = 11), yellow-bellied marmot (Marmota flaviventris, n = 11), brown rat (Rattus norvegicus, n = 10), ground squirrel (Marmotini sp. n = 9), western spotted skunk (Spilogale gracilis, n = 8), American pygmy shrew (Sorex hoyi, n = 6), North American porcupine (Erethizon dorsatum, n = 6), grizzly bear (Ursus arctos horribilis, n = 3), white-tailed antelope squirrel (Ammospermophilus leucurus, n = 3), black-tailed jackrabbit (Lepus californicus, n = 2), brush mouse (Peromyscus boylii, n = 2), bushy-tailed woodrat (Neotoma cinerea, n = 2), collared peccary (Pecari tajacu, n = 2), Douglas squirrel (Tamiasciurus douglasii, n = 2), mule deer (Odocoileus hemionus, n = 2), Panamint chipmunk (Tamias panamintinus, n = 2), Townsend's mole (Scapanus townsendii, n = 2), western harvest mouse (Reithrodontomys megalotis, n = 2), western hog-nosed skunk (Conepatus leuconotus, n = 2), antelope squirrel (Ammospermophilus, n = 1), fox squirrel (Sciurus niger, n = 1), long-tailed weasel (Mustela frenata, n = 1), Mexican wolf (Canis lupus baileyi, n = 1), Pacific jumping mouse (Zapus trinotatus, n = 1), pronghorn antelope (Antilocapra americana, n = 1), stoat (Mustela erminea, n = 1), white-tailed deer (Odocoileus virginianus, n = 1).
FIG. 1.Plague seropositive and seronegative samples collected from wild canids, 2005–2018. Color images are available online.
FIG. 2.True seroprevalence of canid samples collected from 2005 to 2019. Gray county shading shows the number of samples tested in that county. Diameter of circles shows county seroprevalence. Color images are available online.