Literature DB >> 34190607

Cooccurring Activities of Two Autotrophic Pathways in Symbionts of the Hydrothermal Vent Tubeworm Riftia pachyptila.

Juliana M Leonard1, Jessica Mitchell2, Roxanne A Beinart3, Jennifer A Delaney2, Jon G Sanders2, Greg Ellis4, Ethan A Goddard4, Peter R Girguis2, Kathleen M Scott1.   

Abstract

Genome and proteome data predict the presence of both the reductive citric acid cycle (rCAC; also called the reductive tricarboxylic acid cycle) and the Calvin-Benson-Bassham cycle (CBB) in "Candidatus Endoriftia persephonae," the autotrophic sulfur-oxidizing bacterial endosymbiont from the giant hydrothermal vent tubeworm Riftia pachyptila. We tested whether these cycles were differentially induced by sulfide supply, since the synthesis of biosynthetic intermediates by the rCAC is less energetically expensive than that by the CBB. R. pachyptila was incubated under in situ conditions in high-pressure aquaria under low (28 to 40 μmol · h-1) or high (180 to 276 μmol · h-1) rates of sulfide supply. Symbiont-bearing trophosome samples excised from R. pachyptila maintained under the two conditions were capable of similar rates of CO2 fixation. Activities of the rCAC enzyme ATP-dependent citrate lyase (ACL) and the CBB enzyme 1,3-bisphosphate carboxylase/oxygenase (RubisCO) did not differ between the two conditions, although transcript abundances for ATP-dependent citrate lyase were 4- to 5-fold higher under low-sulfide conditions. δ13C values of internal dissolved inorganic carbon (DIC) pools were varied and did not correlate with sulfide supply rate. In samples taken from freshly collected R. pachyptila, δ13C values of lipids fell between those collected for organisms using either the rCAC or the CBB exclusively. These observations are consistent with cooccurring activities of the rCAC and the CBB in this symbiosis. IMPORTANCE Previous to this study, the activities of the rCAC and CBB in R. pachyptila had largely been inferred from "omics" studies of R. pachyptila without direct assessment of in situ conditions prior to collection. In this study, R. pachyptila was maintained and monitored in high-pressure aquaria prior to measuring its CO2 fixation parameters. Results suggest that ranges in sulfide concentrations similar to those experienced in situ do not exert a strong influence on the relative activities of the rCAC and the CBB. This observation highlights the importance of further study of this symbiosis and other organisms with multiple CO2-fixing pathways, which recent genomics and biochemical studies suggest are likely to be more prevalent than anticipated.

Entities:  

Keywords:  CO2 fixation; Calvin-Benson-Bassham cycle; Candidatus Endoriftia persephonae; Riftia pachyptila; carbon dioxide fixation; hydrothermal vent; reductive citric acid cycle

Mesh:

Substances:

Year:  2021        PMID: 34190607      PMCID: PMC8357282          DOI: 10.1128/AEM.00794-21

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  47 in total

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Authors: 
Journal:  Rapid Commun Mass Spectrom       Date:  1999-07       Impact factor: 2.419

2.  Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics.

Authors:  Julie C Robidart; Shellie R Bench; Robert A Feldman; Alexey Novoradovsky; Sheila B Podell; Terry Gaasterland; Eric E Allen; Horst Felbeck
Journal:  Environ Microbiol       Date:  2008-03       Impact factor: 5.491

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Authors:  C R Fisher; M C Kennicutt; J M Brooks
Journal:  Science       Date:  1990-03-02       Impact factor: 47.728

4.  ATP-citrate lyase from the green sulfur bacterium Chlorobium limicola is a heteromeric enzyme composed of two distinct gene products.

Authors:  T Kanao; T Fukui; H Atomi; T Imanaka
Journal:  Eur J Biochem       Date:  2001-03

5.  Reversibility of citrate synthase allows autotrophic growth of a thermophilic bacterium.

Authors:  Achim Mall; Jessica Sobotta; Claudia Huber; Carolin Tschirner; Stefanie Kowarschik; Katarina Bačnik; Mario Mergelsberg; Matthias Boll; Michael Hügler; Wolfgang Eisenreich; Ivan A Berg
Journal:  Science       Date:  2018-02-01       Impact factor: 47.728

6.  A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile.

Authors:  Takuro Nunoura; Yoshito Chikaraishi; Rikihisa Izaki; Takashi Suwa; Takaaki Sato; Takeshi Harada; Koji Mori; Yumiko Kato; Masayuki Miyazaki; Shigeru Shimamura; Katsunori Yanagawa; Aya Shuto; Naohiko Ohkouchi; Nobuyuki Fujita; Yoshihiro Takaki; Haruyuki Atomi; Ken Takai
Journal:  Science       Date:  2018-02-01       Impact factor: 47.728

7.  Carbon isotope fractionation by thermophilic phototrophic sulfur bacteria: evidence for autotrophic growth in natural populations.

Authors:  M T Madigan; R Takigiku; R G Lee; H Gest; J M Hayes
Journal:  Appl Environ Microbiol       Date:  1989-03       Impact factor: 4.792

8.  Linking hydrothermal geochemistry to organismal physiology: physiological versatility in Riftia pachyptila from sedimented and basalt-hosted vents.

Authors:  Julie C Robidart; Annelys Roque; Pengfei Song; Peter R Girguis
Journal:  PLoS One       Date:  2011-07-14       Impact factor: 3.240

9.  The genome of deep-sea vent chemolithoautotroph Thiomicrospira crunogena XCL-2.

Authors:  Kathleen M Scott; Stefan M Sievert; Fereniki N Abril; Lois A Ball; Chantell J Barrett; Rodrigo A Blake; Amanda J Boller; Patrick S G Chain; Justine A Clark; Carisa R Davis; Chris Detter; Kimberly F Do; Kimberly P Dobrinski; Brandon I Faza; Kelly A Fitzpatrick; Sharyn K Freyermuth; Tara L Harmer; Loren J Hauser; Michael Hügler; Cheryl A Kerfeld; Martin G Klotz; William W Kong; Miriam Land; Alla Lapidus; Frank W Larimer; Dana L Longo; Susan Lucas; Stephanie A Malfatti; Steven E Massey; Darlene D Martin; Zoe McCuddin; Folker Meyer; Jessica L Moore; Luis H Ocampo; John H Paul; Ian T Paulsen; Douglas K Reep; Qinghu Ren; Rachel L Ross; Priscila Y Sato; Phaedra Thomas; Lance E Tinkham; Gary T Zeruth
Journal:  PLoS Biol       Date:  2006-11       Impact factor: 8.029

10.  Widespread occurrence of two carbon fixation pathways in tubeworm endosymbionts: lessons from hydrothermal vent associated tubeworms from the mediterranean sea.

Authors:  Vera Thiel; Michael Hügler; Martina Blümel; Heike I Baumann; Andrea Gärtner; Rolf Schmaljohann; Harald Strauss; Dieter Garbe-Schönberg; Sven Petersen; Dominique A Cowart; Charles R Fisher; Johannes F Imhoff
Journal:  Front Microbiol       Date:  2012-12-14       Impact factor: 5.640

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