Literature DB >> 34179727

Engineering Biorthogonal Phage-Based Nanobots for Ultrasensitive, In Situ Bacteria Detection.

Hannah S Zurier1, Michelle M Duong1, Julie M Goddard1, Sam R Nugen1.   

Abstract

Advances in synthetic biology, nanotechnology, and genetic engineering are allowing parallel advances in areas such as drug delivery and rapid diagnostics. Although our current visions of nanobots may be far off, a generation of nanobots synthesized by engineering viruses is approaching. Such tools can be used to solve complex problems where current methods do not meet current demands. Assuring safe drinking water is crucial for minimizing the spread of waterborne illnesses. Although extremely low levels of fecal contamination in drinking water are sufficient to cause a public health risk, it remains challenging to rapidly detect Escherichia coli, the standard fecal indicator organism. Current methods sensitive enough to meet regulatory standards suffer from either prohibitively long incubation times or requirement of expensive, impractical equipment. Bacteriophages, tuned by billions of years of evolution to bind viable bacteria and readily engineered to produce custom proteins, are uniquely suited to bacterial detection. We have developed a biosensor platform based on magnetized phages encoding luminescent reporter enzymes. This system utilizes bio-orthogonally functionalized phages to enable site-specific conjugation to magnetic nanoparticles. The resulting phage-based nanobots, when combined with standard, portable field equipment, allow for detection of <10 cfu/100 mL of viable E. coli within 7 h, faster than any methods published to date.

Entities:  

Keywords:  bacteriophages; magnetic nanoparticles; nanobot; nanoprobe; pathogen detection; water safety

Year:  2020        PMID: 34179727      PMCID: PMC8224829          DOI: 10.1021/acsabm.0c00546

Source DB:  PubMed          Journal:  ACS Appl Bio Mater        ISSN: 2576-6422


  40 in total

1.  Phage T4 SOC and HOC display of biologically active, full-length proteins on the viral capsid.

Authors:  Z Ren; L W Black
Journal:  Gene       Date:  1998-07-30       Impact factor: 3.688

2.  Reporter bacteriophage T7NLC utilizes a novel NanoLuc::CBM fusion for the ultrasensitive detection of Escherichia coli in water.

Authors:  T C Hinkley; S Garing; S Singh; A-L M Le Ny; K P Nichols; J E Peters; J N Talbert; S R Nugen
Journal:  Analyst       Date:  2018-08-20       Impact factor: 4.616

3.  Genetic optimization of a bacteriophage-delivered alkaline phosphatase reporter to detect Escherichia coli.

Authors:  Angelyca A Jackson; Troy C Hinkley; Joey N Talbert; Sam R Nugen; David A Sela
Journal:  Analyst       Date:  2016-07-14       Impact factor: 4.616

4.  Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for uid.

Authors:  A K Bej; J L DiCesare; L Haff; R M Atlas
Journal:  Appl Environ Microbiol       Date:  1991-04       Impact factor: 4.792

5.  Simple fed-batch technique for high cell density cultivation of Escherichia coli.

Authors:  D J Korz; U Rinas; K Hellmuth; E A Sanders; W D Deckwer
Journal:  J Biotechnol       Date:  1995-02-21       Impact factor: 3.307

6.  Development of a novel bacteriophage based biomagnetic separation method as an aid for sensitive detection of viable Escherichia coli.

Authors:  Ziyuan Wang; Danhui Wang; Juhong Chen; David A Sela; Sam R Nugen
Journal:  Analyst       Date:  2015-12-22       Impact factor: 4.616

Review 7.  Escherichia coli: the best biological drinking water indicator for public health protection.

Authors:  S C Edberg; E W Rice; R J Karlin; M J Allen
Journal:  Symp Ser Soc Appl Microbiol       Date:  2000

8.  A highly sensitive detection platform based on surface-enhanced Raman scattering for Escherichia coli enumeration.

Authors:  Erhan Temur; Ismail Hakki Boyaci; Uğur Tamer; Hande Unsal; Nihal Aydogan
Journal:  Anal Bioanal Chem       Date:  2010-04-18       Impact factor: 4.142

9.  Towards rapid on-site phage-mediated detection of generic Escherichia coli in water using luminescent and visual readout.

Authors:  Sean Burnham; Jing Hu; Hany Anany; Lubov Brovko; Frederique Deiss; Ratmir Derda; Mansel W Griffiths
Journal:  Anal Bioanal Chem       Date:  2014-06-27       Impact factor: 4.142

10.  Phage-Based Fluorescent Biosensor Prototypes to Specifically Detect Enteric Bacteria Such as E. coli and Salmonella enterica Typhimurium.

Authors:  Manon Vinay; Nathalie Franche; Gérald Grégori; Jean-Raphaël Fantino; Flavie Pouillot; Mireille Ansaldi
Journal:  PLoS One       Date:  2015-07-17       Impact factor: 3.240

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  2 in total

Review 1.  Bacteriophage Capsid Modification by Genetic and Chemical Methods.

Authors:  Caitlin M Carmody; Julie M Goddard; Sam R Nugen
Journal:  Bioconjug Chem       Date:  2021-03-04       Impact factor: 4.774

2.  Comparative Analysis of NanoLuc Luciferase and Alkaline Phosphatase Luminescence Reporter Systems for Phage-Based Detection of Bacteria.

Authors:  Shalini Wijeratne; Arindam Bakshi; Joey Talbert
Journal:  Bioengineering (Basel)       Date:  2022-09-16
  2 in total

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