| Literature DB >> 34178619 |
Tiansong Xie1,2, Xuanyi Wang2,3, Zehua Zhang1,2, Zhengrong Zhou1,4.
Abstract
OBJECTIVES: To investigate the value of CT-based radiomics analysis in preoperatively discriminating pancreatic mucinous cystic neoplasms (MCN) and atypical serous cystadenomas (ASCN).Entities:
Keywords: comput(eriz)ed tomography; cystademoma; diagnosis; pancreas; radiomic analysis
Year: 2021 PMID: 34178619 PMCID: PMC8231011 DOI: 10.3389/fonc.2021.621520
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Workflow of the radiomics analysis. (A) Tumors were semi-manually segmented on all slices. (B) Radiomics features were extracted. (C) Feature selection procedure was used to identity the optimal feature set. (D) The Rad-score was built using random forest method and validated by 10-fold cross validation.
List of Radiomics feature classes.
| Radiomics feature class | Description |
|---|---|
| Shape | Descriptors of the 3D/2D-size and shape of the ROI |
| First-order | Describe the distribution of voxel intensities within the ROI |
| GLDM | Quantify the gray level dependencies (the number of connected voxels within a certain distance that are dependent on the center voxel) in the ROI |
| GLRLM | Quantify the gray level runs (the length in number of voxels that have the same intensity) |
| GLSZM | Quantify gray level zones (the number of connected voxels with the same intensity) in the ROI |
| Wavelet-based | Wavelet transformation based on above features |
GLDM, gray level dependence matrix; GLRLM, gray level run length matrix; GLSZM, gray level size zone matrix.
Clinical and radiological characteristics of pancreatic mucinous cystic neoplasm and atypical serous cystadenoma.
| Variables | Atypical serous cystadenoma | Mucinous cystic neoplasm |
|
|---|---|---|---|
| Ages (years) | 46.16±11.82 | 44.80±13.31 | 0.426 |
| Sex | |||
| Male | 21 (18.6%) | 6 (5.8%) | 0.005 |
| Female | 92 (81.4%) | 97 (94.2%) | |
| Symptoms | 0.467 | ||
| Negative | 84 (74.3%) | 72 (69.9%) | |
| Positive | 29 (25.7%) | 31 (30.1%) | |
| Tumor marker | |||
| CA19-9 (U/ml) | 9.02 (6.25-14.44) | 12.50 (7.33-22.50) | 0.003 |
| CEA (ng/ml) | 1.56 (0.93-1.96) | 1.44 (0.88-2.27) | 0.766 |
| CA125 (U/ml) | 11.37 (8.41-17.60) | 12.00 (9.22-19.47) | 0.112 |
| Size | 3.00 (2.10-3.85) | 4.00 (2.90-5.70) | <0.001 |
| Location | <0.001 | ||
| Head/Neck | 54 (47.8%) | 15 (14.6%) | |
| Body/Tail | 59 (52.2%) | 88 (85.4%) | |
| Leison contour | 0.186 | ||
| Round/Ovoid | 74 (65.5%) | 76 (73.8%) | |
| Lobulated | 39 (34.5%) | 27 (26.2%) | |
| Wall thicknes | 0.043 | ||
| Thin | 102 (90.3%) | 83 (80.6%) | |
| Thick | 11 (9.7%) | 20 (19.4%) | |
| Wall enhancement | <0.001 | ||
| Negative | 81 (71.7%) | 47 (45.6%) | |
| Positive | 32 (28.3%) | 56 (54.4%) | |
| Calcification | 0.115 | ||
| Negative | 98 (86.7%) | 81 (78.6%) | |
| Positive | 15 (13.3%) | 22 (21.4%) | |
| Mural nodules | 0.531 | ||
| Negative | 99 (87.6%) | 93 (90.3%) | |
| Positive | 14 (12.4%) | 10 (9.7%) | |
| Dilation of the Wirsung duct | 0.277 | ||
| Negative | 109 (96.5%) | 96 (93.2%) | |
| Positive | 4 (3.5%) | 7 (6.8%) |
Chi-Square tests were used to compare the difference in categorical variables (sex, symptoms, location, lesion contour, wall thickness, wall enhancement, calcification, mural nodules, and dilation of the Wirsung duct). A two-sample t-test was used to compare the difference in age. A Mann-Whiney U test was used to compare the difference in serum tumor makers and tumor size. CA19-9, carbohydrate antigen 19-9; CEA, carcinoma embryonic antigen; CA125, carbohydrate antigen 125.
Figure 2Manthattan plot showing p-values of 282 radiomics features that exhibited significant difference between mucinous cystic neoplasm and atypical serous cystadenomas. P-values are adjusted for false discovery rate using Benjamini-Hochberg method.
Comparisons of 10 optimal radiomics features in distinguishing between mucinous cystic neoplasm and atypical serous cystadenomas.
| Features | Atypical serous cystadenoma | Mucinous cystic neoplasm |
|
|---|---|---|---|
| Firstorder_Minimum | 0.96 (0.86, 1.08) | 0.91 (0.75, 1.03) | 0.003 |
| GLCM_SumEntropy_waveletHLL | 1.52 (1.50, 1.53) | 1.52 (1.51, 1.53) | 0.045 |
| Firstorder_Maximum_waveletLLL | 4.02 (3.78, 4.35) | 4.11 (3.90, 4.60) | 0.024 |
| GLDM_DependenceEntropy_waveletHLH | 4.60 (4.49, 4.66) | 4.47 (4.38, 4.56) | <0.001 |
| GLCM_MaximumProbability_waveletHLH | 0.28 (0.28, 0.28) | 0.28 (0.27, 0.28) | 0.002 |
| GLCM_Autocorrelation_waveletLHL | 2.33 (2.28, 2.38) | 2.29 (2.28, 2.32) | <0.001 |
| GLSZM_LargeAreaHighGrayLevelEmphasis_waveletHHH | 14330720.57 (5489652.56, 43035885.79) | 66623017.63 (18474345.51, 225682538.90) | <0.001 |
| GLSZM_LargeAreaLowGrayLevelEmphasis | 306285001.00 (71503936.00, 1300000000.00) | 911436100.00 (214510204.45, 4578654406.50) | 0.001 |
| Firstorder_Minimum_waveletLHH | -0.12 (-0.16, -0.08) | -0.16 (-0.20, -0.12) | <0.001 |
| GLRLM_LongRunHighGrayLevelEmphasis_waveletLHH | 13.43 (12.37, 14.26) | 14.87 (13.93, 15.91) | <0.001 |
Data is expressed as median (interquartile range). P-values are adjusted using Benjamini-Hochberg method, with false discovery rate set at 5%.
Confusion matrix analyses of 10 optimal radiomics features.
| Feature | AUC | CI | Cutoff-value | Sensitivity | Specificity | Accuracy | PPV | NPV |
|---|---|---|---|---|---|---|---|---|
| Firstorder_Minimum | 0.623 | 0.548-0.698 | 0.777 | 0.291 | 0.929 | 0.625 | 0.789 | 0.59 |
| GLCM_SumEntropy_waveletHLL | 0.587 | 0.511-0.663 | 1.528 | 0.330 | 0.814 | 0.583 | 0.618 | 0.571 |
| Firstorder_Maximum_waveletLLL | 0.597 | 0.522-0.673 | 3.980 | 0.487 | 0.68 | 0.579 | 0.547 | 0.625 |
| GLDM_DependenceEntropy_waveletHLH | 0.730 | 0.663-0.796 | 4.454 | 0.466 | 0.867 | 0.676 | 0.762 | 0.641 |
| GLCM_MaximumProbability_waveletHLH | 0.628 | 0.554-0.702 | 0.279 | 0.718 | 0.487 | 0.597 | 0.561 | 0.655 |
| GLCM_Autocorrelation_waveletLHL | 0.657 | 0.584-0.731 | 2.331 | 0.825 | 0.504 | 0.657 | 0.603 | 0.760 |
| GLSZM_LargeAreaHighGrayLevelEmphasis_waveletHHH | 0.748 | 0.683-0.812 | 27502194.84 | 0.718 | 0.681 | 0.699 | 0.673 | 0.726 |
| GLSZM_LargeAreaLowGrayLevelEmphasis | 0.628 | 0.554-0.702 | 482639205.8 | 0.612 | 0.593 | 0.602 | 0.578 | 0.626 |
| Firstorder_Minimum_waveletLHH | 0.668 | 0.596-0.739 | -0.147 | 0.573 | 0.690 | 0.634 | 0.628 | 0.639 |
| GLRLM_LongRunHighGrayLevelEmphasis_waveletLHH | 0.771 | 0.709-0.833 | 14.646 | 0.563 | 0.867 | 0.722 | 0.795 | 0.685 |
AUC, area under the curve; CI, confidence interval; PPV, positive predictive value; NPV, negative predictive value.
Figure 3(A) Area under the curve of 10 optimal radiomics features identified by minimum redundancy maximum relevance method. (B) Display of importance of 10 optimal radiomics features in random forest classifier built in the full dataset.
Figure 4Heatmap of 10 optimal radiomics features of 216 enrolled patients. The radiomics features were normalized according to Z-score.
Figure 5Evaluation of the diagnostic performance of the Rad-score and the radiological model. (A) Receiver operating curves of 10-fold cross validation of the Rad-score. The Rad-score achieved average AUC of 0.78. (B) Receiver operating curves of 10-fold cross validation of the radiological model. The average AUC of the radiological model was 0.73.
Parameters of the radiological model built in the full dataset.
| Variables | Coefficient | Odds ratio | 95% CI |
| Akaike information criteria |
|---|---|---|---|---|---|
| Intercept | -2.479 | < 0.001 | 262.379 | ||
| Location | 1.558 | 4.749 | 2.391-9.432 | < 0.001 | |
| Wall enhancement | 1.030 | 2.802 | 1.529-5.133 | < 0.001 | |
| Gender | 0.968 | 2.632 | 0.942-7.356 | 0.065 |
CI, confidence interval.