Literature DB >> 3417835

Prediction of peptide retention times.

Y Sakamoto1, N Kawakami, T Sasagawa.   

Abstract

A new approach for predicting the retention times of peptides, either with isocratic or gradient elution is described. The isocratic capacity factors of peptides are correlated with their molecular weights and with their hydrophobicities. Given the experimental conditions, and the amino acid composition, it is possible to calculate the retention time of a peptide eluted by a gradient, for any slope of gradient, flow-rate and column length.

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Year:  1988        PMID: 3417835     DOI: 10.1016/s0021-9673(00)94457-1

Source DB:  PubMed          Journal:  J Chromatogr


  5 in total

1.  Effect of anionic ion-pairing reagent concentration (1-60 mM) on reversed-phase liquid chromatography elution behaviour of peptides.

Authors:  M Shibue; C T Mant; R S Hodges
Journal:  J Chromatogr A       Date:  2005-07-01       Impact factor: 4.759

2.  Peptide retention prediction using hydrophilic interaction liquid chromatography coupled to mass spectrometry.

Authors:  Majors J Badgett; Barry Boyes; Ron Orlando
Journal:  J Chromatogr A       Date:  2018-01-11       Impact factor: 4.759

3.  DART-ID increases single-cell proteome coverage.

Authors:  Albert Tian Chen; Alexander Franks; Nikolai Slavov
Journal:  PLoS Comput Biol       Date:  2019-07-01       Impact factor: 4.475

4.  Protein abundance profiling of the Escherichia coli cytosol.

Authors:  Yasushi Ishihama; Thorsten Schmidt; Juri Rappsilber; Matthias Mann; F Ulrich Hartl; Michael J Kerner; Dmitrij Frishman
Journal:  BMC Genomics       Date:  2008-02-27       Impact factor: 3.969

5.  A robust linear regression based algorithm for automated evaluation of peptide identifications from shotgun proteomics by use of reversed-phase liquid chromatography retention time.

Authors:  Hua Xu; Lanhao Yang; Michael A Freitas
Journal:  BMC Bioinformatics       Date:  2008-08-19       Impact factor: 3.169

  5 in total

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