| Literature DB >> 34168918 |
Hongxiang Li1, Yin Li1, Dongmei Tian1, Jiaqian Zhang1, Shiwei Duan1,2.
Abstract
miR-940 is a microRNA located on chromosome 16p13.3, which has varying degrees of expression imbalance in many diseases. It binds to the 3' untranslated region (UTR) and affects the transcription or post-transcriptional regulation of target protein-coding genes. For a diversity of cellular processes, including cell proliferation, migration, invasion, apoptosis, epithelial-to-mesenchymal transition (EMT), cell cycle, and osteogenic differentiation, miR-940 can affect them not only by regulating protein-coding genes but also long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) in pathways. Intriguingly, miR-940 participates in four pathways that affect cancer development, including the Wnt/β-catenin pathway, mitogen-activated protein kinase (MAPK) pathway, PD-1 pathway, and phosphatidylinositol 3-kinase (PI3K)-Akt pathway. Importantly, the expression of miR-940 is intimately correlated with the diagnosis and prognosis of tumor patients, as well as to the efficacy of tumor chemotherapy drugs. In conclusion, our main purpose is to outline the expression of miR-940 in various diseases and the molecular biological and cytological functions of target genes in order to reveal its potential diagnostic and prognostic value as well as its predictive value of drug efficacy.Entities:
Keywords: diagnosis; drug efficacy; miR-940; pathway; prognosis; target gene
Year: 2021 PMID: 34168918 PMCID: PMC8192490 DOI: 10.1016/j.omtn.2021.05.003
Source DB: PubMed Journal: Mol Ther Nucleic Acids ISSN: 2162-2531 Impact factor: 8.886
Figure 1Research history of miR-940
In 2014, miR-940 was studied in cancer for the first time. It was thought that the intervention of miR-940 could be used for sensitive platinum-based chemotherapy, and it was found that miR-940 was involved in regulation of the MAPK signaling pathway. In 2015, a study found that salivary miR-940 has good sensitivity and specificity in the diagnosis of resectable pancreatic cancer. The abnormal expression of miR-940 in PDAC is significantly related to the prognosis of patients. In 2017, it was found that OC cells secreted tumor suppressor miR-940 into the extracellular environment through exosomes. In GBM, miR-940 was found to be a competitive endogenous RNA of lncHERG. In 2018, miR-940 was found to affect the regulation of the PD-1 checkpoint pathway through c-CBL. In 2020, it was found that the miR-940/MAPK1 axis was regulated by circ_0058124 in thyroid carcinoma (TC).
Expression and target genes of miR-940 in various cancers
| Tumor type | Expression of miR-940 | Level | Target gene | Reference |
|---|---|---|---|---|
| OS | upregulation | tissue and cell | SFRP1 | |
| Bone metastatic lesions | upregulation | cell | ARHGAP1, FAM134A | |
| ESCC | downregulation | tissue and cell | – | |
| GC | upregulation | tissue and cell | CBL-b, ZNF24 | |
| downregulation | tissue and cell | – | ||
| HCC | downregulation | tissue | CXCR2, SPOCK1, ESRRG, H1HR | |
| downregulation | tissue and cell | – | ||
| CRC | downregulation | tissue and cell | MACC1 | |
| PAAD | upregulation | tissue and cell | GSK3β, SFRP1 | |
| PDAC | downregulation | tissue and cell | MYD88 | |
| OSCC | upregulation | cell | – | |
| TSCC | downregulation | cell | CXCR2 | |
| NSCLC | downregulation | tissue and cell | c-CBL, FAM83F, SNAI1 | |
| NPC | upregulation | tissue | – | |
| downregulation | tissue | Nestin | ||
| Bladder cancer | upregulation | tissue and cell | INPP4A, GSK-3β | |
| UCB | upregulation | tissue | – | |
| PCa | downregulation | tissue and cell | MIEN1 | |
| EC | upregulation | tissue and cell | MRVI1 | |
| TNBC | downregulation | tissue and cell | ZNF24 | |
| MBC | upregulation | tissue | – | |
| Cervical carcinoma | upregulation | tissue and cell | P27, PTEN | |
| OC | downregulation | cell | PKC-δ, SRC | |
| EOC | upregulation | tissue and cell | – | |
| CML | upregulation | cell | – | |
| Glioma | upregulation | tissue and cell | KLF9 | |
| downregulation | tissue | MTHFD2 | ||
| GBM | downregulation | tissue and cell | CKS1, ZEB2 | |
| TC | downregulation | tissue | MAPK1 | |
| Gastric mucosa-associated lymphoid tissue lymphoma | upregulation | tissue | – |
OS, osteosarcoma; ESCC, esophageal squamous cell carcinoma; GC, gastric cancer; HCC, hepatocellular carcinoma; CRC, colorectal cancer; PAAD, pancreatic cancer; PDAC, pancreatic ductal adenocarcinoma; OSCC, oral squamous cell carcinoma; TSCC, tongue squamous cell carcinomas; NSCLC, non-small cell lung cancer; NPC, nasopharyngeal carcinoma; UCB, urothelial carcinoma of bladder; PCa, prostatic cancer; EC, endometrial carcinoma; TNBC, triple-negative breast cancer; MBC, HER2+ metastatic breast cancer; OC, ovarian cancer; EOC, epithelial ovarian cancer; CML, chronic myeloid leukemia; GBM, glioblastoma; TC, thyroid carcinoma;
Figure 4The regulatory role between miR-940 and other non-coding RNAs
The interaction of miR-940 with other non-coding RNAs can affect cell proliferation, migration, invasion, and apoptosis. The →-shaped line represents promotion, and the T-shaped line represents inhibition.
Figure 2miR-940 affects the biological process of cells through target genes
miR-940 affects cell proliferation, migration, invasion, apoptosis, EMT, cell cycle, and osteogenic differentiation by regulating target genes. EMT, epithelial-to-mesenchymal transition. The →-shaped line represents promotion, and the T-shaped line represents inhibition.
Figure 3miR-940 regulates the biological processes of cells by affecting signaling pathways
miR-940 regulates the signal molecules in the Wnt/β-catenin signaling pathway, MAPK signaling pathway, PD-1 checkpoint pathway, and PI3K-Akt signaling pathway.
Diagnostic value of miR-940 in different diseases
| Types | Ways | Samples | Results | Reference |
|---|---|---|---|---|
| GC | comparison of gastric cancer patients and non-gastric cancer patients | plasma from 115 patients with gastric cancer and 105 healthy controls | sensitivity = 81.25%, specificity = 98.57%, AUC = 0.9657 (95% CI = 0.9400–0.9915) | |
| BC and TNBC | comparison of breast cancer patients and non-breast cancer patients, and miR-940 high-expression patients and low-expression patients | 128 breast cancer patients | sensitivity = 94.5%, specificity of 78.6%, AUC = 0.905 | |
| PAAD | miR-3679-5p and miR-940; comparison of pancreatic cancer patients and non-pancreatic cancer patients (benign pancreatic tumor and healthy people) | saliva from 40 pancreatic cancer patients and 60 non-cancer patients (20 benign pancreatic cancer and 40 healthy controls) | sensitivity = 70.0%, specificity = 70.0%, AUC = 0.763 | |
| Submucosal invasive gastric cancer | four-serum miRNA signature including miR-153-3p, miR-708, miR-940, and miR-375 | 114 biopsy specimens | AUROC = 0.792 (95% CI = 0.731–0.873) | |
| NPC | three-serum miRNA signature including miR-548q and miR-940 | 55 NPC patients and 45 non-NPC patients | miR-548q + miR-940, sensitivity = 94.0%, specificity = 92.5%, AUC = 0.972 (95% CI, 0.913–0.995) | |
| UCB | four-miRNA signature including miR-26a, miR-93, miR-191, and miR-940 | urine samples from 85 patients with UCB and 45 controls | At 95% CI (56%–84%), sensitivity = 70%; at 95% CI (74%–95%), specificity = 84%, AUC = 85.8% | |
| WT | five-serum miRNA signature including hsa-miR-149, hsa-miR-7112, hsa-miR-940, hsa-miR-1248, and hsa-miR-490, high-expression patients and low-expression patients | 127 patients with WT | AUC = 0.767; it has good specificity and sensitivity |
BC, breast cancer; AUC, area under the curve; AUROC, area under the receiver operating characteristic curve; CI, confidence interval; PAAD, pancreatic cancer; WT, Wilms tumor.
Prognostic value of miR-940 in different diseases
| Types | Samples | Prognosis of miR-940 overexpression | Reference |
|---|---|---|---|
| ESCC | 210 ESCC patients | good | |
| HCC | 362 HCC patients | poor | |
| 46 HCC patients | good | ||
| 377 HCC patients | good | ||
| 23 HCC patients | good | ||
| PDAC | 78 PDAC patients | good | |
| NSCLC | 72 NSCLC patients | good | |
| WT | 132 WT patients | poor | |
| EC | 546 EC patients | poor | |
| Cervical carcinoma | 83 cervical carcinoma patients | poor | |
| OC | 471 OC patients | good | |
| BC | 128 BC patients | good | |
| GBM | 198 GBM patients | poor |
The relationship between miR-940 and clinical pathology
| Types | Samples | Clinicopathological parameters | Reference |
|---|---|---|---|
| ESCC | 210 ESCC patients | tumor differentiation, lymph node metastasis, TNM stage | |
| GC | 115 patients with GC and 105 healthy controls | TNM stage | |
| HCC | 46 HCC patients | Edmondson grade, tumor microsatellite, multiple tumors, vascular invasion | |
| NSCLC | 72 NSCLC patients | tumor stage, tumor size | |
| EC | 546 EC patients | age, grade, death | |
| Cervical carcinoma | 83 Cervical carcinoma patients | cervical cancer progression | |
| BC and TNBC | 128 BC patients | lymph node metastasis, TNM stage | |
| 38 TNBC patients | |||
| PTC | 266 PTC patients | bilateral tumor, multicentricity, extrathyroidal invasion, cervical lymph node metastasis, distant metastasis, clinical advanced stages (III/IV) |
Comparison of study samples in diseases with inconsistent miR-940 expression
| Types | Sample type | Name and quantity | The expression of miR-940 | Reference | |
|---|---|---|---|---|---|
| GC | tissues | 38 pairs of GC tissues and paracancerous tissues | higher in GC | ||
| cell line | the normal gastric membrane cell line GES-1 and GC cell lines MGC803, HGC27, SNU16, MKN87, KATO III, and SGC7901 | higher in SNU16, MKN87, KATO III, and SGC7901; lower in GES-1, MGC803, and HGC27 | |||
| plasma | plasma from 30 healthy people and 30 patients with gastric cancer | lower in plasma of GC | |||
| tissues | 34 pairs of GC tissues and paracancerous tissues | lower in GC | |||
| HCC | tissues | 81 patients with and 91 without vascular invasion hepatocellular carcinoma | higher in tissues with vascular invasion; lower in tissues without vascular invasion | ||
| tissues | 46 pairs of HCC tissues and paracancerous tissues | lower in HCC | |||
| cell line | normal cells (HL-7702) and HCC cells (MHCC-97H, SMMC-7721( | higher in HL-7702; lower in MHCC-97H and SMMC-7721 | |||
| tissues | 46 pairs of HCC tissues and paracancerous tissues | lower in HCC | |||
| cell line | normal cells (HL-7702) and HCC cells (HepG2, Hep3b) | higher in HL-7702; lower in HepG2 and Hep3b | |||
| tissues | 23 pairs of HCC tissues and paracancerous tissues | lower in HCC | |||
| cell line | normal cells (Chang, L-02) and HCC cells (SMMC-7721, Huh-7, HepG2, Hep3B) | higher in Chang, L-02, HepG2, and Hep3B; lower in SMMC-7721 and Huh-7 | |||
| NPC | tissues | 55 NPC patients and 45 non-cancerous controls | higher in NPC | ||
| tissues | 28 pairs of NPC tissues and para-cancerous tissues | lower in NPC | |||
| Glioma | tissues | 23 pairs of glioma tissues and paracancerous tissues (14 males, 9 females; age range, 47–72 years) | higher in glioma | ||
| cell line | normal human astrocytes NHA and glioma cells (U251, U87, T98G, and LN229) | higher in U251, U87, T98G, and LN229; lower in NHA | |||
| tissues | 5 normal tissues and 525 glioma tissues | lower in glioma | |||
| tissues | 5 normal tissues and 34 glioma tissues | lower in glioma. | |||