Literature DB >> 3416880

Purification of RNA 3'-terminal phosphate cyclase from HeLa cells. Covalent modification of the enzyme with different nucleotides.

O Vicente1, W Filipowicz.   

Abstract

RNA 3'-terminal phosphate cyclase has been purified about 6000-fold to near homogeneity from HeLa cells. The purified protein is a single polypeptide with an Mr of 38,000-40,000 and a Stokes radius of 2.66 nm. The cyclase shows a pH optimum of 8.0-9.0. In the presence of Mg2+ and ATP this enzyme catalyzes the conversion of a 3'-phosphate group into the cyclic 2',3'-phosphodiester at the 3' end of RNA, through formation of a covalent cyclase-AMP intermediate. GTP, CTP and UTP (but not dATP or ADP) can also function as cofactors in the cyclization reaction, although less efficiently (apparent Km values for ATP and GTP are 6 microM and 200 microM, respectively). Consistent with this, the enzyme can be covalently labelled with the four [alpha-32P]NTPs.

Entities:  

Mesh:

Substances:

Year:  1988        PMID: 3416880     DOI: 10.1111/j.1432-1033.1988.tb14300.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  7 in total

1.  Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis.

Authors:  Anupam K Chakravarty; Paul Smith; Stewart Shuman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-13       Impact factor: 11.205

2.  RNA 3'-phosphate cyclase (RtcA) catalyzes ligase-like adenylylation of DNA and RNA 5'-monophosphate ends.

Authors:  Anupam K Chakravarty; Stewart Shuman
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

3.  Crystallization and preliminary crystallographic studies of putative RNA 3'-terminal phosphate cyclase from the crenarchaeon Sulfolobus tokodaii.

Authors:  Satoru Shimizu; Masanori Ohki; Nami Okubo; Kaoru Suzuki; Masaru Tsunoda; Takeshi Sekiguchi; Akio Takénaka
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-05-22

4.  The human RNA 3'-terminal phosphate cyclase is a member of a new family of proteins conserved in Eucarya, Bacteria and Archaea.

Authors:  P Genschik; E Billy; M Swianiewicz; W Filipowicz
Journal:  EMBO J       Date:  1997-05-15       Impact factor: 11.598

5.  Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer.

Authors:  Naoko Tanaka; Paul Smith; Stewart Shuman
Journal:  Structure       Date:  2010-03-14       Impact factor: 5.006

6.  tRNA ligase catalyzes the GTP-dependent ligation of RNA with 3'-phosphate and 5'-hydroxyl termini.

Authors:  Kevin K Desai; Ronald T Raines
Journal:  Biochemistry       Date:  2012-02-07       Impact factor: 3.162

7.  Structure-activity relationships in human RNA 3'-phosphate cyclase.

Authors:  Naoko Tanaka; Stewart Shuman
Journal:  RNA       Date:  2009-08-18       Impact factor: 4.942

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.