| Literature DB >> 34168680 |
Peng-Peng Niu1, Xue Wang1, Yu-Ming Xu1.
Abstract
BACKGROUND ANDEntities:
Keywords: C-reactive protein; Mendelian randomization; inflammation; interleukin-6; intracranial aneurysm
Year: 2021 PMID: 34168680 PMCID: PMC8219052 DOI: 10.3389/fgene.2021.679363
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
FIGURE 1Schematic diagram of the present study. (A) MR study of sIL6R levels on risk of IA. (B) MR study of CRP levels on risk of IA. (C) LDSC regression analysis. CRP, C-reactive protein; GWAS, genome-wide association study; IA, intracranial aneurysm; LDSC, linkage disequilibrium score; MR, Mendelian randomization; SAH, subarachnoid hemorrhage; sIL6R, soluble interleukin-6 receptor; SNP, single nucleotide polymorphism; uIA, unruptured intracranial aneurysm. The three assumptions of the two-sample MR study are as follows: instrument SNPs are associated with exposure; instrument SNPs do not affect the outcome through pathways other than the exposure; and instrument SNPs do not associate with measured or unmeasured confounders. SNPs that meet these three assumptions are considered valid instrument SNPs. Note LDSC regression analysis was not performed for sIL6R because the values of the heritability z-score and the mean Chi-square value were too small.
Characteristics of GWAS datasets.
| sIL6R | 21,758 individuals | Population structure and study-specific parameters. | Individuals with sIL6R levels >3 or 5 standard deviations from the mean were excluded by most original study cohorts. |
| IA | 7,495 cases and 71,934 controls; 5,140 cases and 71,934 controls for SAH subgroup; 2,070 cases and 71,934 controls for uIA subgroup | Sex and 20 principal components. Controls were matched by genotyping platform and country at the cohort level. | Patients with autosomal dominant polycystic kidney disease, Ehlers-Danlos disease, and Marfan’s syndrome were excluded. All controls were unselected controls with no known IA status. |
| CRP for main MR analyses | 204,402 individuals | Age, sex, population substructure, and relatedness. | Individuals with autoimmune diseases, taking immune-modulating agents (if this information was available), or with CRP levels >4 standard deviations from the mean were excluded. |
| CRP for LDSC regression | 400,094 individuals | Age, age2, sex, age × sex, age2 × sex, and first 20 principal components. | Data was from UK Biobank. |
FIGURE 2Mendelian randomization analyses of sIL6R levels on risk of IA. CI, confidence interval; IVW, inverse variance weighted; OR, odds ratio; SAH, subarachnoid hemorrhage; SNP, single nucleotide polymorphism; uIA, unruptured intracranial aneurysm.
FIGURE 3Mendelian randomization analyses of CRP levels on risk of IA. CI, confidence interval; IVW, inverse variance weighted; OR, odds ratio; SAH, subarachnoid hemorrhage; SNP, single nucleotide polymorphism; uIA, unruptured intracranial aneurysm.