| Literature DB >> 34163252 |
Tine Bichel Lauritsen1, Jan Maxwell Nørgaard1, Kirsten Grønbæk2,3,4, Anders Pommer Vallentin5, Syed Azhar Ahmad6, Louise Hur Hannig7, Marianne Tang Severinsen8,9, Kasper Adelborg10,11, Lene Sofie Granfeldt Østgård11,12.
Abstract
BACKGROUND: The Danish Myelodysplastic Syndromes Database (DMDSD) comprises nearly all patients diagnosed with myelodysplastic syndromes (MDS) in Denmark since 2010. The DMDSD has not yet been used for epidemiological research and the quality of registered variables remains to be investigated.Entities:
Keywords: accuracy; cohort; database; myelodysplastic syndromes; validation
Year: 2021 PMID: 34163252 PMCID: PMC8213953 DOI: 10.2147/CLEP.S306857
Source DB: PubMed Journal: Clin Epidemiol ISSN: 1179-1349 Impact factor: 4.790
Data Recorded on Five Registration Forms Used by the Danish Myelodysplastic Syndromes Database
| Registration Form and Time of Registration | Variables |
|---|---|
| Name, civil registration number, and demographic data | |
| To be filled out at diagnosis | Diagnosis according to WHO(2008/2016)/ICD-10 |
| Date of diagnosis | |
| Prior hematological disease, prior chemotherapy or prior radiotherapy (yes/no/unknown) | |
| Results of cytogenetic evaluation (grouped according to IPSS-R) | |
| Cytopenia | |
| Anemia (< 6.2 mmol/l (yes/no)** | |
| Thrombocytopenia (< 100 x109/L) (yes/no)** | |
| Neutropenia (< 1.8 x109/L) (yes/no)** | |
| Blast percentage in blood and bone marrow | |
| Treatment with blood transfusion prior to diagnosis (yes/no/unknown) | |
| Presence of material in biobank (yes/no/unknown) | |
| Laboratory records* | |
| Date of diagnostic bone marrow sample | |
| To be filled out at diagnosis by a clinical | Diagnoses according to WHO (2008/2016)/ICD-10 |
| Cytogeneticist | Cytogenetic result (normal, clonal changes, not done, no mitoses) |
| Cytogenetic material (peripheral blood, bone marrow, others) | |
| Number of analyzed metaphases, abnormal metaphases and clonal changes | |
| ISCN karyotype | |
| IPSS-R | |
| Diagnosis according to WHO (2008/2016)/ICD-10 | |
| Registration form to be filled out two and five | Date of follow-up |
| Years after diagnosis or in case of progression to | Treatment |
| AML, death or termination of outpatient follow- | Transfusion (yes/no)** |
| Up | Erythropoiesis-stimulating agents (yes/no)** |
| Granulocyt-colony-stimulating-factors (yes/no)** | |
| Iron chelating agents (yes/no)** | |
| Hydroxyurea (yes/no)** | |
| Hypomethylating agents (Azacitidine) (yes/no)** | |
| AML-like chemotherapy (yes/no)** | |
| Immunosuppressive treatment (yes/no)** | |
| Lenalidomide (yes/no)** | |
| Other treatment (yes/no)** | |
| No treatment (yes/no)** | |
| Progression to acute myeloid leukemia (yes/no). If yes, date of progression | |
| Participation in protocol (yes/no) | |
| Bone marrow transplantation (yes/no). If yes, date and type | |
| Status (dead/alive) | |
| At death or termination of follow-up as an | Date of death or end of follow-up |
| Out-patient | Did the patient die at the hospital (yes/no) |
| Was follow-up terminated from the department (yes/no) | |
| Referred to follow-up at another department (yes/no) |
Notes: *Middle cell volume, hemoglobin, platelet count, white blood cell count, monocyte count, lactate dehydrogenase, ferritin, urate, erythropoietin, CD 34 positive cells, myoblasts, packed cell volume. **In order to register a “yes” you have to tick a “box”. If nothing is ticked off a “no” is automatically registered.
Abbreviations: AML, acute myeloid leukemia; ICD, International Classification of Diseases; ISCN, International System for Human Cytogenetic Nomenclature; IPSS-R, International Prognostic Scoring System; WHO, World Health Organization.
Accepted Values and Gold Standards for the Validation of 48 Variables from the Danish Myelodysplastic Syndromes Database*
| Variables | Correct Specification of Registered Variables | Gold Standards |
|---|---|---|
| Diagnosis | MDS unclassified or specification of MDS subtype | Patobank/Medical records |
| Date of diagnosis | Date of diagnostic bone marrow sample (± 14 days) | Patobank |
| Prior hematological disease (>3months) | Yes/no/unknown | Medical records |
| Prior chemotherapy | Yes/no/unknown | Medical records |
| Prior radiotherapy | Yes/no/unknown | Medical records |
| Anemia (< 6.2 mmol/L) | Yes/no ** | Laboratory information system |
| Thrombocytopenia (<100 x 109/L) | Yes/no ** | Laboratory information system |
| Neutropenia (<1.8 x109/L) | Yes/no ** | Laboratory information system |
| Blast percentage in bone marrow | Exact value | Patobank/Medical records |
| Blood transfusion prior to diagnosis | Yes/no/unknown | Medical records |
| MCV (fL) | *** | Laboratory information system |
| Hemoglobin (mmol/L) | *** | Laboratory information system |
| Platelet count (109/L) | *** | Laboratory information system |
| White blood cell count (109/L) | *** | Laboratory information system |
| Leucocyte count (109/L) | *** | Laboratory information system |
| Monocyte count (109/L) | *** | Laboratory information system |
| Lactate dehydrogenase (U/L) | *** | Laboratory information system |
| Ferritin (µg/L) | *** | Laboratory information system |
| Transfusion | Yes/no** | Medical records |
| Erythropoiesis-stimulating agents | Yes/no** | Medical records |
| G-CSF | Yes/no** | Medical records |
| Iron-chelating agents | Yes/no** | Medical records |
| Hypomethylating agents | Yes/no** | Medical records |
| Hydroxurea | Yes/no** | Medical records |
| AML-like chemotherapy | Yes/no** | Medical records |
| Immunosuppresive agents | Yes/no** | Medical records |
| Lenalidomide | Yes/no** | Medical records |
| Protocol participation | Yes/no/unknown | Medical records |
| Progression to sAML | Yes/no/unknown | Patobank/medical records |
| Date of progression to sAML | Date specified (± 7 days) | Patobank/medical records |
| Bone marrow transplantation | Yes/no | Medical records |
| Date of bone marrow transplantation | Exact date of transplantation | Medical records |
| Type of bone marrow transplantation | Myeloablative/reduced intensity conditioning or autologous | Medical records |
Notes: *Variables regarding treatment, progression to sAML, protocol participation and bone marrow transplantation were validated twice (at a registration form including 2-year data and 5-year data respectively, accounting for 30 variables in total). **In order to register a “yes” you have to tick a “box”. If nothing is ticked off a “no” is automatically registered. ***Exact value measured on day of diagnostic bone marrow sample (±30 days).
Abbreviations: G-CSF, granulocyte-colony-stimulating-factors; MCV, middle cell volume; sAML, secondary acute myeloid leukemia.
Characteristics of Patients Registered in the Danish Myelodysplastic Syndromes Database. Data are Shown for the Whole Population, the Validation Sample and the Misclassified MDS Patients
| Total MDS Population | Validation Sample | Misclassified as MDS Patients | |
|---|---|---|---|
| At diagnosis (number of patients) | 2284 | 238 | 22 |
| Male sex | 1417 (62%) | 131 (55%) | 15 (68%) |
| Median age, years (IQR) | 76 (68–82) | 76 (68–82) | 78 (63–82) |
| Enrolment year | |||
| 2010–2014 | 1185 (52%) | 117(49%) | 16 (73%) |
| 2015–2019 | 1099 (48%) | 121 (51%) | 6 (27%) |
| Diagnostic WHO subtype | |||
| MDS with single lineage dysplasia | 241 (11%) | 29 (12%) | – |
| MDS with ringed sideroblasts | 238 (10%) | 26 (11%) | 0 |
| MDS with excess blasts | 563 (25%) | 57 (24%) | 0 |
| MDS with multi-lineage dysplasia | 665 (29%) | 70 (29%) | - |
| MDS with isolated del(5q) | 77 (3%) | 11 (4%) | 0 |
| MDS unclassifiable | 500 (22%) | 46 (19%) | 16 (72%) |
| Prior hematological disease (>3 months) | 140 (6%) | 19 (8%) | 0 |
| Missing | 0 | 0 | 0 |
| Unknown | 59 (3%) | 6 (2%) | 0 |
| Prior chemotherapy | 126 (6%) | 13 (5%) | 0 |
| Missing | 0 | 0 | 0 |
| Unknown | 164 (7%) | 14 (6%) | 4 (18%) |
| Prior radiotherapy | 96 (4%) | 9 (4%) | - |
| Missing | 0 | 0 | 0 |
| Unknown | 175 (8%) | 15 (6%) | - |
| Blood transfusion prior to diagnosis | 106 (5%) | 14 (6%) | 0 |
| Missing | 1218 (53%) | 122 (51%) | 15 (68%) |
| Unknown | 128 (6%) | 16 (7%) | - |
| IPSS | |||
| Good-risk | 1013 (44%) | 107 (45%) | 12 (55%) |
| Intermediate-risk | 746 (33%) | 80 (34%) | - |
| Poor-risk | 261 (11.5%) | 22 (9%) | - |
| Unknown | 254 (11%) | 29 (12%) | - |
| Missing | 10 (0.5%) | 0 | 0 |
| Anemia (hemoglobin < 6.2 mmol/L) | 1353 (59%) | 135 (56%) | 10 (45%) |
| Thrombocytopenia (platelets < 100 x 109/L) | 905 (40%) | 83 (35%) | 6 (27%) |
| Neutropenia (WBC < 1.8 x 109/L) | 1026 (45%) | 97 (41%) | 11 (50%) |
| Blast count marrow, median (IQR) | 2 (0–7) | 2 (0–5) | 1 (0–2) |
| Missing | 0 | 0 | 0 |
| Unknown | 133 (6%) | 6 (2.5%) | 4 (18%) |
| MCV, fL, median (IQR) | 99 (91–106) | 101 (94–107) | 97 (88–103) |
| Missing | 0 | 0 | 0 |
| Unknown | 130 (6%) | 8 (3%) | 1 (5%) |
| Hemoglobin, mmol/L, median (IQR) | 6.1 (5.5–6.9) | 6.2 (5.5–7.0) | 7 (5.6–8.2) |
| Missing | 0 | 0 | 0 |
| Unknown | 11 (0.5%) | 0 | 0 |
| Platelet count, x 109/L, median (IQR) | 125 (68–235) | 140 (76.0–252) | 155 (99–250) |
| Missing | 0 | 0 | 0 |
| Unknown | 15 (0.6%) | 0 | 0 |
| WBC, x 109/L, median (IQR) | 1.8 (0.9–3.5) | 2.1 (1.1–3.7) | 1.6 (1.1–4.2) |
| Missing | 0 | 0 | 0 |
| Unknown | 45 (2%) | - | 0 |
| Leucocyte count, x 109/L, median (IQR) | 3.8 (2.5–6.1) | 4 (2.4–6.4) | 3.9 (6.3) |
| Missing | 0 | 0 | 0 |
| Unknown | 13 (0.6%) | - | 0 |
| Monocyte count, x 109/L, median (IQR) | 0.3 (0.2–0.6) | 0.3 (0.2–0.7) | 0.7 (0.2–0.8) |
| Missing | 1218 (53%) | 122 (51%) | 14 (64%) |
| Unknown | 44 (2%) | - | 0 |
| LDH, U/L, median (IQR)* | 208 (175–252) | 205 (171–241) | 200 (170–236) |
| Missing | 0 | 0 | 0 |
| Unknown | 88 (4%) | 9 (4%) | 0 |
| Ferritin (µg/L) | 362 (174–691) | 366 (186–698) | 168 (79–398) |
| Missing | 0 | 0 | 0 |
| Unknown | 331 (15%) | 26 (11%) | 2 (9%) |
| 2- year data (number of patients) | 1910 (84%) | 197 (83%) | 21 (95%) |
| Treatment | |||
| Transfusion | 936 (49%) | 100 (51%) | 5 (24%) |
| Erythropoiesis-stimulating agents | 667 (35%) | 73 (37%) | 4 (19%) |
| Granulocyte-colony-stimulating-factors | 220 (12%) | 22 (11%) | – |
| Hypomethylating agents (Azacitidine) | 291 (15%) | 25 (13%) | 0 |
| Iron-chelating agents | 61 (3%) | 7 (4%) | – |
| Hydroxyurea | 88 (5%) | 7 (4%) | – |
| AML-like chemotherapy | 106 (6%) | 12 (6%) | 0 |
| Immune suppressive agents | 63 (3%) | 9 (5%) | 0 |
| Lenalidomide | 28 (2%) | – | 0 |
| Protocol participation | 111 (5%) | 6 (3%) | 0 |
| Missing | 374 (16%) | 0 | 0 |
| Unknown | 54 (2%) | 5 (2%) | 0 |
| Progression to sAML | 238 (13%) | 31 (16%) | 0 |
| Missing | 55 (3%) | 5 (2.5%) | 0 |
| Unknown | 40 (2%) | - | – |
| Date of progression to sAML | 139 (58%) | 21 (68%) | – |
| Missing | 99 (42%) | 10 (32%) | – |
| Unknown | 0 | 0 | – |
| Allo-HSCT | 109 (5%) | 17 (9%) | 0 |
| Missing | 374 (16%) | 0 | 0 |
| Unknown | 0 | 0 | 0 |
| Date of allo-HSCT | 109 (100%) | 17 (100%) | – |
| Missing | 0 | 0 | – |
| Unknown | 0 | 0 | – |
| Type of allo-HSCT | 109 (100%) | 17 (100%) | – |
| Missing | 0 | 0 | – |
| Unknown | 0 | 0 | – |
Notes: *For patients < 70 years old normal range for LDH is 105 to 205 U/L and for patients > 70 years normal range for LDH is 115 to 255 U/L. - Data not shown due to small numbers.
Abbreviations: allo-HSCT, allogeneic hematopoietic stem cell transplantation; IPSS, International Prognostic Scoring System; IQR, interquartile range (25th to 75th percentiles); LDH, lactate dehydrogenase; MCV, middle cell volume; sAML, secondary acute myeloid leukemia; WBC, white blood cell count; WHO, World Health Organization.
Figure 1Predictive values for 18 variables from the registration form completed at diagnosis from the Danish Myelodysplastic Syndromes Database. Notes: *Number of correctly coded records/number of relevant records reviewed (missing/unknown values excluded).
Figure 2Predictive values for 15 variables from the registration form including 2-year data from the Danish Myelodysplastic Syndromes Database. Notes: *Number of correctly coded records/number of relevant records reviewed (missing/unknown values excluded).