| Literature DB >> 34159255 |
Ishaku Lemu Haruna1, Huitong Zhou1, Jon G H Hickford1.
Abstract
Leptin is a protein hormone secreted from white adipose tissue. It regulates food/feed intake, body weight, immune function and reproduction. In our investigation, the polymerase chain reaction (PCR) amplification coupled with single-strand conformational polymorphism (SSCP) analysis was used to reveal variation in bovine leptin gene (LEP) in New Zealand (NZ) Holstein Friesian × Jersey (HF × J) dairy cows. Subsequent sequence analysis of a 430 bp amplicon spanning the entirety of exon 3 and part of the intron 2 region revealed three variant sequences ( A 3 , B 3 and C 3 ) containing a total of five nucleotide substitutions, all of which have been reported previously. Using general linear mixed-effect model analyses, the presence of variant A 3 (the most common variant) was associated with a decreased level of C15:1, C18:1 trans-11, C18:1 all trans, C18:2 trans-9, cis-12, C22:0 and C24:0 levels but increased levels of C12:1 and C13:0 iso ( p < 0.05 ). Variant B 3 was associated with reduced levels of C6:0, C8:0, C11:0, C13:0 and C20:0 but increased C17:0 iso and C24:0 levels ( p < 0.05 ). Variant C 3 was associated with decreased C17:0 iso levels but increased C20:0 ( p < 0.05 ) levels. In a genotype model, the A 3 B 3 genotype was associated with increased levels of C22:0 and C24:0 but decreased C8:0, C10:0, C11:0, C13:0, C15:0 and grouped medium-chain fatty acid (MCFA) levels ( p < 0.05 ). Genotype A 3 C 3 was found to be associated with decreased levels of C10:0, C11:0, C13:0 and grouped MCFA ( p < 0.05 ). This is the first report of findings of this kind in NZ HF × J cows, and they suggest that variation in exon 3 of bovine leptin gene could be explored as a means of decreasing the concentration of saturated fatty acids in milk. Copyright:Entities:
Year: 2021 PMID: 34159255 PMCID: PMC8209505 DOI: 10.5194/aab-64-245-2021
Source DB: PubMed Journal: Arch Anim Breed ISSN: 0003-9438
Associations between bovine leptin gene variants with average quantity of individual and grouped milk fatty acid methyl ester (FAME) in New Zealand (NZ) HF J cows.
| Mean | |||||||
|---|---|---|---|---|---|---|---|
| Individual/ | Variants | Other | Absent | Present | |||
| grouped | variants | ||||||
| fatty acids | in model | ||||||
| C4:0 | none | 1.28 | 14 | 1.27 | 286 | 0.760 | |
| none | 1.27 | 123 | 1.26 | 177 | 0.583 | ||
| | none | 1.26 | 247 | 1.28 | 53 | 0.482 | |
| C6:0 | none | 1.56 | 14 | 1.56 | 286 | 0.871 | |
| none | 1.57 | 123 | 1.55 | 177 | |||
| | none | 1.56 | 247 | 1.56 | 53 | 0.955 | |
| C8:0 | none | 1.17 | 14 | 1.18 | 286 | 0.598 | |
| none | 1.19 | 123 | 1.17 | 177 | |||
| | none | 1.18 | 247 | 1.17 | 53 | 0.450 | |
| C10:0 | none | 3.12 | 14 | 3.25 | 286 | ||
| none | 3.28 | 123 | 3.21 | 177 | |||
| none | 3.26 | 247 | 3.19 | 53 | |||
| 3.12 | 14 | 3.21 | 286 | 0.323 | |||
| 3.27 | 123 | 3.14 | 177 | ||||
| | 3.28 | 247 | 3.12 | 53 | |||
| C10:1 | none | 0.27 | 14 | 0.28 | 286 | ||
| none | 0.28 | 123 | 0.28 | 177 | 0.366 | ||
| none | 0.28 | 247 | 0.27 | 53 | |||
| 0.27 | 14 | 0.28 | 286 | 0.200 | |||
| | 0.28 | 247 | 0.27 | 53 | |||
| C11:0 | none | 0.06 | 14 | 0.06 | 286 | 0.469 | |
| none | 0.06 | 123 | 0.06 | 177 | |||
| | none | 0.06 | 247 | 0.06 | 53 | 0.465 | |
| C12:0 | none | 3.70 | 14 | 3.95 | 286 | ||
| none | 3.98 | 123 | 3.91 | 177 | 0.215 | ||
| none | 3.96 | 247 | 3.85 | 53 | |||
| 3.69 | 14 | 3.93 | 286 | ||||
| | 3.88 | 247 | 3.79 | 53 | |||
| C12:1 | none | 0.08 | 14 | 0.09 | 286 | ||
| none | 0.09 | 123 | 0.09 | 177 | 0.988 | ||
| none | 0.09 | 247 | 0.09 | 53 | |||
| 0.08 | 14 | 0.09 | 286 | ||||
| | 0.09 | 247 | 0.08 | 53 | |||
| C13:0 | none | 0.04 | 14 | 0.04 | 286 | 0.987 | |
| none | 0.04 | 128 | 0.04 | 177 | 0.292 | ||
| | none | 0.04 | 260 | 0.04 | 53 | ||
| C13:0 | none | 0.07 | 14 | 0.08 | 286 | ||
| none | 0.08 | 123 | 0.08 | 177 | 0.515 | ||
| none | 0.08 | 247 | 0.08 | 53 | |||
| 0.07 | 14 | 0.08 | 286 | ||||
| | 0.08 | 247 | 0.07 | 53 | |||
| C13:0 | none | 0.12 | 14 | 0.12 | 286 | 0.954 | |
| none | 0.12 | 123 | 0.12 | 177 | |||
| none | 0.12 | 247 | 0.12 | 53 | 0.328 | ||
Continued.
| Mean | |||||||
|---|---|---|---|---|---|---|---|
| Individual/ | Variants | Other | Absent | Present | |||
| grouped | variants | ||||||
| fatty acids | in model | ||||||
| C14:0 | none | 12.47 | 14 | 12.48 | 286 | 0.963 | |
| none | 12.54 | 123 | 12.43 | 177 | 0.288 | ||
| | none | 12.51 | 247 | 12.35 | 53 | 0.223 | |
| C14:1 | none | 0.89 | 14 | 0.96 | 286 | 0.285 | |
| none | 0.93 | 123 | 0.97 | 177 | |||
| | none | 0.96 | 247 | 0.93 | 53 | 0.353 | |
| C14:1 | none | 0.88 | 14 | 0.95 | 286 | 0.221 | |
| none | 0.93 | 123 | 0.97 | 177 | |||
| | none | 0.96 | 247 | 0.93 | 53 | 0.368 | |
| C15:0 | none | 1.50 | 14 | 1.48 | 286 | 0.664 | |
| none | 1.50 | 123 | 1.46 | 177 | |||
| | none | 1.48 | 247 | 1.47 | 53 | 0.880 | |
| C15:0 | none | 0.67 | 14 | 0.64 | 286 | 0.265 | |
| none | 0.64 | 123 | 0.64 | 177 | 0.841 | ||
| | none | 0.64 | 247 | 0.62 | 53 | 0.277 | |
| C15:1 | none | 0.30 | 14 | 0.28 | 286 | ||
| none | 0.28 | 123 | 0.28 | 177 | 0.698 | ||
| | none | 0.28 | 247 | 0.28 | 53 | 0.370 | |
| C16:1 | none | 1.25 | 14 | 1.27 | 286 | 0.792 | |
| none | 1.26 | 123 | 1.27 | 177 | 0.948 | ||
| | none | 1.26 | 247 | 1.28 | 53 | 0.672 | |
| C17:0 | none | 0.56 | 14 | 0.55 | 286 | 0.464 | |
| none | 0.54 | 123 | 0.56 | 177 | |||
| none | 0.55 | 247 | 0.53 | 53 | |||
| 0.54 | 123 | 0.56 | 177 | ||||
| | 0.55 | 247 | 0.54 | 53 | |||
| C17:0 | none | 0.87 | 14 | 0.87 | 286 | 0.879 | |
| none | 0.88 | 123 | 0.87 | 177 | |||
| | none | 0.87 | 247 | 0.88 | 53 | 0.583 | |
| C17:1 | none | 0.20 | 14 | 0.20 | 286 | 0.732 | |
| none | 0.20 | 123 | 0.20 | 177 | 0.661 | ||
| | none | 0.20 | 247 | 0.20 | 53 | 0.728 | |
| C18:1 | none | 0.31 | 14 | 0.30 | 286 | 0.200 | |
| none | 0.29 | 123 | 0.30 | 177 | 0.779 | ||
| | none | 0.30 | 247 | 0.30 | 53 | 0.693 | |
| C18:1 | none | 3.17 | 14 | 2.73 | 286 | ||
| none | 2.75 | 123 | 2.74 | 177 | 0.897 | ||
| | none | 2.76 | 247 | 2.70 | 53 | 0.583 | |
| C18:2 | none | 0.42 | 14 | 0.42 | 286 | 0.921 | |
| none | 0.42 | 123 | 0.41 | 177 | 0.523 | ||
| | none | 0.41 | 247 | 0.42 | 53 | 0.642 | |
| C18:2 | none | 0.08 | 14 | 0.07 | 286 | 0.291 | |
| none | 0.07 | 123 | 0.07 | 177 | 0.300 | ||
| none | 0.07 | 247 | 0.07 | 53 | 0.847 | ||
Continued.
| Mean | |||||||
|---|---|---|---|---|---|---|---|
| Individual/ | Variants | Other | Absent | Present | |||
| grouped | variants | ||||||
| fatty acids | in model | ||||||
| C18:2 | none | 0.54 | 14 | 0.47 | 286 | ||
| none | 0.47 | 123 | 0.47 | 177 | 0.628 | ||
| | none | 0.47 | 247 | 0.47 | 53 | 0.769 | |
| C18:2 | none | 0.66 | 14 | 0.69 | 286 | ||
| none | 0.68 | 123 | 0.70 | 177 | |||
| none | 0.70 | 247 | 0.68 | 53 | 0.213 | ||
| 0.66 | 14 | 0.69 | 286 | ||||
| | 0.67 | 123 | 0.69 | 177 | |||
| C18:2 | none | 0.29 | 14 | 0.29 | 286 | 0.954 | |
| none | 0.29 | 123 | 0.29 | 177 | 0.971 | ||
| | none | 0.29 | 247 | 0.29 | 53 | 0.796 | |
| C18:3 | none | 0.76 | 14 | 0.80 | 286 | ||
| none | 0.79 | 123 | 0.81 | 177 | |||
| none | 0.80 | 247 | 0.79 | 53 | 0.258 | ||
| 0.75 | 14 | 0.80 | 286 | ||||
| | 0.77 | 123 | 0.80 | 177 | |||
| C19:0 | none | 0.14 | 14 | 0.14 | 286 | 0.353 | |
| none | 0.14 | 123 | 0.14 | 177 | 0.906 | ||
| | none | 0.14 | 247 | 0.14 | 53 | 0.402 | |
| C20:0 | none | 0.13 | 14 | 0.13 | 286 | 0.932 | |
| none | 0.13 | 123 | 0.13 | 177 | |||
| none | 0.13 | 247 | 0.13 | 53 | |||
| 0.13 | 123 | 0.13 | 177 | ||||
| | 0.13 | 247 | 0.13 | 53 | |||
| C20:1 | none | 0.07 | 14 | 0.06 | 286 | ||
| none | 0.06 | 123 | 0.06 | 177 | 0.833 | ||
| | none | 0.06 | 247 | 0.06 | 53 | 0.989 | |
| C20:1 | none | 0.15 | 14 | 0.15 | 286 | 0.772 | |
| none | 0.15 | 123 | 0.15 | 177 | 0.644 | ||
| | none | 0.15 | 247 | 0.16 | 53 | 0.303 | |
| C20:1 | none | 0.07 | 14 | 0.08 | 286 | 0.222 | |
| none | 0.08 | 123 | 0.08 | 177 | 0.778 | ||
| | none | 0.08 | 247 | 0.08 | 53 | 0.454 | |
| C20:3 | none | 0.03 | 14 | 0.03 | 286 | 0.300 | |
| none | 0.03 | 123 | 0.03 | 177 | 0.447 | ||
| | none | 0.03 | 247 | 0.03 | 53 | 0.859 | |
| C20:4 | none | 0.04 | 14 | 0.03 | 286 | 0.269 | |
| none | 0.03 | 123 | 0.03 | 177 | 0.978 | ||
| | none | 0.04 | 247 | 0.03 | 53 | 0.439 | |
| C20:5 | none | 0.09 | 14 | 0.09 | 286 | ||
| none | 0.09 | 123 | 0.09 | 177 | 0.893 | ||
| | none | 0.09 | 247 | 0.09 | 53 | 0.993 | |
| C22:0 | none | 0.08 | 14 | 0.07 | 286 | ||
| none | 0.06 | 123 | 0.07 | 177 | |||
| none | 0.07 | 247 | 0.07 | 53 | 0.666 | ||
| B | 0.08 | 14 | 0.06 | 286 | |||
| A | 0.07 | 123 | 0.07 | 177 | |||
Continued.
| Mean | |||||||
|---|---|---|---|---|---|---|---|
| Individual/ | Variants | Other | Absent | Present | |||
| grouped | variants | ||||||
| fatty acids | in model | ||||||
| C22:1 | none | 0.07 | 14 | 0.07 | 286 | 0.355 | |
| none | 0.07 | 123 | 0.07 | 177 | 0.642 | ||
| | none | 0.07 | 247 | 0.07 | 53 | ||
| C24:0 | none | 0.05 | 14 | 0.04 | 286 | ||
| none | 0.04 | 123 | 0.05 | 177 | |||
| none | 0.04 | 247 | 0.05 | 53 | 0.891 | ||
| 0.05 | 14 | 0.04 | 286 | ||||
| | 0.05 | 123 | 0.05 | 177 | |||
| C22:5 | none | 0.13 | 14 | 0.12 | 286 | 0.315 | |
| none | 0.12 | 123 | 0.12 | 177 | 0.877 | ||
| | none | 0.12 | 247 | 0.12 | 53 | 0.213 | |
| SCFA | none | 2.84 | 14 | 2.82 | 286 | 0.800 | |
| none | 2.84 | 123 | 2.81 | 177 | 0.177 | ||
| | none | 2.82 | 247 | 2.83 | 53 | 0.674 | |
| MCFA | none | 20.46 | 14 | 20.85 | 286 | 0.369 | |
| none | 20.99 | 123 | 20.73 | 177 | |||
| none | 20.91 | 247 | 20.56 | 53 | |||
| 20.95 | 123 | 20.40 | 177 | ||||
| | 21.01 | 247 | 20.30 | 53 | |||
| LCFA | none | 48.75 | 14 | 48.93 | 286 | 0.802 | |
| none | 48.94 | 123 | 48.92 | 177 | 0.938 | ||
| | none | 48.82 | 247 | 49.37 | 53 | ||
| MUFA | none | 20.36 | 14 | 19.98 | 286 | 0.457 | |
| none | 19.82 | 123 | 20.12 | 177 | |||
| | none | 20.00 | 247 | 19.94 | 53 | 0.829 | |
| PUFA | none | 4.25 | 14 | 4.08 | 286 | 0.209 | |
| none | 4.07 | 123 | 4.10 | 177 | 0.475 | ||
| | none | 4.10 | 247 | 4.03 | 53 | 0.300 | |
| C18:1 all | none | 3.48 | 14 | 3.03 | 286 | ||
| none | 3.05 | 123 | 3.048 | 177 | 0.912 | ||
| | none | 3.05 | 247 | 2.10 | 53 | 0.607 | |
| all C18:3 | none | 0.83 | 14 | 0.88 | 286 | ||
| none | 0.86 | 123 | 0.88 | 177 | |||
| none | 0.88 | 247 | 0.86 | 53 | 0.277 | ||
| 0.83 | 14 | 0.87 | 286 | ||||
| | 0.85 | 123 | 0.87 | 177 | |||
| Omega 3 | none | 0.10 | 14 | 1.02 | 286 | 0.353 | |
| none | 1.01 | 123 | 1.03 | 177 | |||
| none | 1.03 | 247 | 1.00 | 53 | |||
| 1.01 | 123 | 1.03 | 177 | ||||
| | 1.03 | 247 | 1.00 | 53 | 0.281 | ||
| Omega 6 | none | 0.80 | 14 | 0.83 | 286 | 0.211 | |
| none | 0.82 | 123 | 0.84 | 177 | |||
| none | 0.83 | 247 | 0.82 | 53 | 0.223 | ||
| 0.80 | 14 | 0.83 | 286 | ||||
| 0.81 | 123 | 0.83 | 177 | ||||
Continued.
| Mean | |||||||
|---|---|---|---|---|---|---|---|
| Individual/ | Variants | Other | Absent | Present | |||
| grouped | variants | ||||||
| fatty acids | in model | ||||||
| C10:1 index | none | 7.85 | 14 | 8.05 | 286 | 0.591 | |
| none | 7.87 | 123 | 8.18 | 177 | |||
| | none | 8.07 | 247 | 7.95 | 53 | 0.550 | |
| C12:1 index | none | 2.07 | 14 | 2.25 | 286 | ||
| none | 2.21 | 123 | 2.26 | 177 | 0.227 | ||
| | none | 2.25 | 247 | 2.19 | 53 | 0.243 | |
| C14:1 index | none | 6.60 | 14 | 7.11 | 286 | 0.236 | |
| None | 6.92 | 123 | 7.23 | 177 | |||
| | none | 7.12 | 247 | 6.10 | 53 | 0.598 | |
| C16:1 index | none | 3.24 | 14 | 3.26 | 286 | 0.926 | |
| None | 3.26 | 123 | 3.26 | 177 | 0.962 | ||
| | none | 3.26 | 247 | 3.27 | 53 | 0.880 | |
| CLA | none | 1.14 | 14 | 0.99 | 286 | ||
| none | 0.99 | 123 | 1.00 | 177 | 0.762 | ||
| none | 1.00 | 247 | 0.97 | 53 | 0.484 | ||
Predicted means and standard error of those means derived from general linear mixed-effects models (GLMMs). Cow age (categorical variable), LEP variants (categorical variable), herd (categorical variable) and days in milk (continuous variable) were fitted to the model as fixed effects. in italics, in bold. SCFA – short-chain fatty acid; MCFA – medium-chain fatty acid; LCFA – long-chain fatty acid; MUFA – monounsaturated fatty acid; PUFA – polyunsaturated fatty acid; UFA – unsaturated fatty acid; SFA – saturated fatty acid. The unit (g/100 g milk FA) applied to all FAs except for the FA indices which had a unit of %.
Associations between milk fatty acid levels and leptin genotypes.
| Mean | ||||
|---|---|---|---|---|
| Individual/grouped fatty acids | ||||
| C4:0 | 1.27 | 1.27 | 1.27 | 0.942 |
| C6:0 | 1.58 | 1.55 | 1.55 | 0.055 |
| C8:0 | 1.21 | 1.17 | 1.17 | |
| C10:0 | 3.36 | 3.21 | 3.19 | |
| C10:1 | 0.28 | 0.28 | 0.28 | 0.480 |
| C11:0 | 0.07 | 0.06 | 0.06 | |
| C12:1 | 0.09 | 0.09 | 0.09 | 0.277 |
| C13:0 | 0.08 | 0.08 | 0.08 | 0.491 |
| C13:0 | 0.04 | 0.04 | 0.04 | 0.295 |
| C13:0 | 0.13 | 0.12 | 0.12 | |
| C14:0 | 12.67 | 12.42 | 12.37 | 0.061 |
| C14:1 | 0.93 | 0.97 | 0.94 | 0.325 |
| C15:0 | 1.52 | 1.45 | 1.48 | |
| C15:1 | 0.29 | 0.28 | 0.28 | 0.670 |
| C16:0 | 37.28 | 37.42 | 37.74 | 0.532 |
| C16:1 | 1.25 | 1.26 | 1.29 | 0.724 |
| C17:0 | 0.55 | 0.56 | 0.54 | 0.124 |
| C17:0 | 0.88 | 0.87 | 0.88 | 0.418 |
| C18:1 | 2.82 | 2.73 | 2.71 | 0.608 |
| C18:2 | 0.42 | 0.41 | 0.42 | 0.885 |
| C18:2 | 0.29 | 0.29 | 0.29 | 0.955 |
| C18:2 | 0.07 | 0.07 | 0.07 | 0.413 |
| C18:2 | 0.48 | 0.46 | 0.47 | 0.494 |
| C18:2 | 0.68 | 0.70 | 0.68 | 0.103 |
| C18:3 | 0.07 | 0.07 | 0.08 | 0.839 |
| C18:3 | 0.79 | 0.81 | 0.78 | 0.128 |
| C19:0 | 0.15 | 0.14 | 0.14 | 0.603 |
| C20:0 | 0.13 | 0.13 | 0.13 | 0.055 |
| C20:1 | 0.06 | 0.06 | 0.06 | 0.854 |
| C20:1 | 0.15 | 0.15 | 0.15 | 0.625 |
| C20:1 | 0.08 | 0.08 | 0.08 | 0.784 |
| C20:4 | 0.04 | 0.03 | 0.03 | 0.641 |
| C22:0 | 0.06 | 0.07 | 0.07 | |
| C24:0 | 0.04 | 0.05 | 0.04 | |
| C22:5 | 0.12 | 0.12 | 0.12 | 0.289 |
| SCFA | 2.85 | 2.81 | 2.82 | 0.437 |
| MCFA | 21.31 | 20.72 | 20.60 | |
| LCFA | 48.55 | 48.91 | 49.25 | 0.343 |
| MUFA | 19.78 | 20.14 | 20.01 | 0.388 |
| PUFA | 4.11 | 4.10 | 4.04 | 0.656 |
| C18:1 all | 3.11 | 3.02 | 3.00 | 0.640 |
| all C18:3 | 0.86 | 0.89 | 0.86 | 0.143 |
| Omega 3 | 1.02 | 1.04 | 1.00 | 0.106 |
| Omega 6 | 0.82 | 0.84 | 0.82 | 0.126 |
| branched FA | 1.60 | 1.60 | 1.57 | 0.259 |
| Total C18:2 | 2.96 | 2.93 | 2.90 | 0.777 |
| Total C18:3 | 0.86 | 0.89 | 0.86 | 0.144 |
| Total UFA | 23.89 | 24.24 | 24.05 | 0.506 |
| Total SFA | 68.84 | 68.70 | 68.98 | 0.738 |
| unsaturated index | 25.77 | 26.09 | 25.86 | 0.597 |
| C10:1 index | 7.80 | 8.19 | 7.99 | 0.136 |
| C12:1 index | 2.23 | 2.27 | 2.21 | 0.533 |
| C14:1 index | 6.84 | 7.26 | 7.05 | 0.165 |
| C16:1 index | 3.25 | 3.25 | 3.30 | 0.880 |
| C18:1 index | 59.78 | 60.08 | 59.88 | 0.819 |
| CLA | 1.01 | 0.99 | 0.98 | 0.819 |
Predicted means and standard error of those means derived from general linear mixed-effects models (GLMMs). Cow age (categorical variable), leptin genotypes (categorical variable), herd (categorical variable) and days in milk (continuous variable) were fitted to the model as fixed effects. Means within a row that do not share a superscript letter (a or b) are separated by Bonferroni test at . in italics, while is in bold. SCFA – short-chain fatty acid; MCFA – medium-chain fatty acid; LCFA – long-chain fatty acid; MUFA – monounsaturated fatty acid; PUFA – polyunsaturated fatty acid; UFA – unsaturated fatty acid; SFA – saturated fatty acid. The unit (g/100 g milk FA) applied to all FAs except for the FA indices which had a unit of %.