Literature DB >> 34158571

Unraveling the dynamic importance of county-level features in trajectory of COVID-19.

Qingchun Li1, Yang Yang2, Wanqiu Wang2, Sanghyeon Lee2, Xin Xiao2, Xinyu Gao2, Bora Oztekin2, Chao Fan2, Ali Mostafavi3.   

Abstract

The objective of this study was to investigate the importance of multiple county-level features in the trajectory of COVID-19. We examined feature importance across 2787 counties in the United States using data-driven machine learning models. Existing mathematical models of disease spread usually focused on the case prediction with different infection rates without incorporating multiple heterogeneous features that could impact the spatial and temporal trajectory of COVID-19. Recognizing this, we trained a data-driven model using 23 features representing six key influencing factors affecting the pandemic spread: social demographics of counties, population activities, mobility within the counties, movement across counties, disease attributes, and social network structure. Also, we categorized counties into multiple groups according to their population densities, and we divided the trajectory of COVID-19 into three stages: the outbreak stage, the social distancing stage, and the reopening stage. The study aimed to answer two research questions: (1) The extent to which the importance of heterogeneous features evolved at different stages; (2) The extent to which the importance of heterogeneous features varied across counties with different characteristics. We fitted a set of random forest models to determine weekly feature importance. The results showed that: (1) Social demographic features, such as gross domestic product, population density, and minority status maintained high-importance features throughout stages of COVID-19 across 2787 studied counties; (2) Within-county mobility features had the highest importance in counties with higher population densities; (3) The feature reflecting the social network structure (Facebook, social connectedness index), had higher importance for counties with higher population densities. The results showed that the data-driven machine learning models could provide important insights to inform policymakers regarding feature importance for counties with various population densities and at different stages of a pandemic life cycle.

Entities:  

Year:  2021        PMID: 34158571     DOI: 10.1038/s41598-021-92634-w

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  6 in total

1.  Tuning the Chern number in quantum anomalous Hall insulators.

Authors:  Yi-Fan Zhao; Ruoxi Zhang; Ruobing Mei; Ling-Jie Zhou; Hemian Yi; Ya-Qi Zhang; Jiabin Yu; Run Xiao; Ke Wang; Nitin Samarth; Moses H W Chan; Chao-Xing Liu; Cui-Zu Chang
Journal:  Nature       Date:  2020-12-16       Impact factor: 49.962

2.  Interdependence and the cost of uncoordinated responses to COVID-19.

Authors:  David Holtz; Michael Zhao; Seth G Benzell; Cathy Y Cao; Mohammad Amin Rahimian; Jeremy Yang; Jennifer Allen; Avinash Collis; Alex Moehring; Tara Sowrirajan; Dipayan Ghosh; Yunhao Zhang; Paramveer S Dhillon; Christos Nicolaides; Dean Eckles; Sinan Aral
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-30       Impact factor: 11.205

3.  Changes in inflammatory and immune drivers in response to immunomodulatory therapies in COVID-19.

Authors:  Stephen Y Wang; C-Hong Chang; Matthew L Meizlish; Parveen Bahel; Henry M Rinder; Alfred I Lee; Hyung J Chun
Journal:  medRxiv       Date:  2020-12-25

4.  The revival of the Gini importance?

Authors:  Stefano Nembrini; Inke R König; Marvin N Wright
Journal:  Bioinformatics       Date:  2018-11-01       Impact factor: 6.937

5.  Limitations of using mobile phone data to model COVID-19 transmission in the USA.

Authors:  Hamada S Badr; Lauren M Gardner
Journal:  Lancet Infect Dis       Date:  2020-11-02       Impact factor: 25.071

Review 6.  Airborne or Droplet Precautions for Health Workers Treating Coronavirus Disease 2019?

Authors:  Prateek Bahl; Con Doolan; Charitha de Silva; Abrar Ahmad Chughtai; Lydia Bourouiba; C Raina MacIntyre
Journal:  J Infect Dis       Date:  2022-05-04       Impact factor: 7.759

  6 in total
  1 in total

1.  Predicting COVID-19 county-level case number trend by combining demographic characteristics and social distancing policies.

Authors:  Megan Mun Li; Anh Pham; Tsung-Ting Kuo
Journal:  JAMIA Open       Date:  2022-06-25
  1 in total

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