Literature DB >> 34156643

1HN, 13C, and 15N backbone resonance assignments of the SET/TAF-1β/I2PP2A oncoprotein (residues 23-225).

Braden M Roth1, Ryan M DePalma1, Mary E Cook2, Kristen M Varney2, David J Weber2, Besim Ogretmen3.   

Abstract

SET (TAF-1β/I2PP2A) is a ubiquitously expressed, multifunctional protein that plays a role in regulating diverse cellular processes, including cell cycle progression, migration, apoptosis, transcription, and DNA repair. SET expression is ubiquitous across all cell types. However, it is overexpressed or post-translationally modified in several solid tumors and blood cancers, where expression levels are correlated with worsening clinical outcomes. SET exerts its oncogenic effects primarily through the formation of antagonistic protein complexes with the tumor suppressor, protein phosphatase 2A (PP2A), and the well-known metastasis suppressor, nm23-H1. PP2A inhibition is often observed as a secondary driver of tumorigenesis and metastasis in human cancers. Preclinical studies have shown that the pharmacological reactivation of PP2A combined with potent inhibitors of the primary driver oncogene produces synergistic cell death and decreased drug resistance. Therefore, the development of novel inhibitors of the SET-PP2A interaction presents an attractive approach to reactivation of PP2A, and thereby, tumor suppression. NMR provides a unique platform to investigate protein targets in their natively folded state to identify protein and small-molecule ligands and report on the protein internal dynamics. The backbone 1HN, 13C, and 15N NMR resonance assignments were completed for the 204 amino acid nucleosome assembly protein-1 (NAP-1) domain of the human SET oncoprotein (residues 23-225). These assignments provide a vital first step toward the development of novel PP2A reactivators via SET-selective inhibition.
© 2021. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  I2PP2A (Inhibitor 2 of Protein Phosphatase 2A); NAP (Nucleosome Assembly Protein); Proto-oncogene; SET (Su(Var)3-9 Enhancer-of-zeste Trithorax); TAF-1β (Template-Activating Factor-Ι (β subunit)

Mesh:

Substances:

Year:  2021        PMID: 34156643      PMCID: PMC8484053          DOI: 10.1007/s12104-021-10034-7

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.731


  11 in total

1.  The structure of nucleosome assembly protein 1.

Authors:  Young-Jun Park; Karolin Luger
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

2.  Relationship between the structure of SET/TAF-Ibeta/INHAT and its histone chaperone activity.

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Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-06       Impact factor: 11.205

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Review 4.  Protein phosphatase 2A: a target for anticancer therapy.

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Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
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7.  TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts.

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8.  The CCPN data model for NMR spectroscopy: development of a software pipeline.

Authors:  Wim F Vranken; Wayne Boucher; Tim J Stevens; Rasmus H Fogh; Anne Pajon; Miguel Llinas; Eldon L Ulrich; John L Markley; John Ionides; Ernest D Laue
Journal:  Proteins       Date:  2005-06-01

9.  The Phyre2 web portal for protein modeling, prediction and analysis.

Authors:  Lawrence A Kelley; Stefans Mezulis; Christopher M Yates; Mark N Wass; Michael J E Sternberg
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Review 10.  A comprehensive and perspective view of oncoprotein SET in cancer.

Authors:  Buuvee Bayarkhangai; Suzan Noureldin; Liting Yu; Na Zhao; Yaru Gu; Hanmei Xu; Changying Guo
Journal:  Cancer Med       Date:  2018-05-10       Impact factor: 4.452

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  1 in total

Review 1.  Structural comparisons reveal diverse binding modes between nucleosome assembly proteins and histones.

Authors:  Jasmita Gill; Anuj Kumar; Amit Sharma
Journal:  Epigenetics Chromatin       Date:  2022-05-24       Impact factor: 5.465

  1 in total

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