Literature DB >> 34150535

Association of eleven single nucleotide polymorphisms with refractive disorders from Eskisehir, Turkey.

Nadir Unlu1, Ebru Erzurumluoglu Gokalp2, Serap Arslan2, Oguz Cilingir2, Muzaffer Bilgin3, Engin Yildirim4, Huseyin Gursoy1.   

Abstract

AIM: To investigate relationship between refractive errors and eleven single nucleotide polymorphisms (SNPs) in HGF, GC, MFN1, GNB4, and VDR genes in Turkish population.
METHODS: A group of 212 participants with myopia (n=91), hyperopia (n=45), and emmetropia (n=76) were investigated in this study. SNPs in HGF, GC, MFN1, GNB4 and VDR genes were studied by SnapShot technique.
RESULTS: The patients in this study consists of 47 female/44 male (age: 23.47±4.30) patients with myopia, 20 female/25 male (age: 31.20±8.02) with hyperopia and 33 female/43 male (age: 25.22±6.60) with emmetropia. The genotype distribution of the rs7618348 polymorphism, which was the only statistically significant one between myopia and emmetropia group. The genotype distribution of the rs3819545, rs3735520, rs7041, and rs2239182 polymorphisms, which were statistically significant between hyperopia and emmetropia groups.
CONCLUSION: The importance of genetic predisposition to refractive errors with respect to etiology of the disease is revealed. It is known that polymorphism studies may differ because of genetic diversity among populations so larger cohort studies are required in different populations to enlighten the etiology of the refractive errors. International Journal of Ophthalmology Press.

Entities:  

Keywords:  Turkey; genetics; hyperopia; myopia; refractive disorders; single nucleotide polymorphisms

Year:  2021        PMID: 34150535      PMCID: PMC8165615          DOI: 10.18240/ijo.2021.06.05

Source DB:  PubMed          Journal:  Int J Ophthalmol        ISSN: 2222-3959            Impact factor:   1.779


  22 in total

1.  Vitamin D receptor (VDR) and group-specific component (GC, vitamin D-binding protein) polymorphisms in myopia.

Authors:  Donald O Mutti; Margaret E Cooper; Ecaterina Dragan; Lisa A Jones-Jordan; Melissa D Bailey; Mary L Marazita; Jeffrey C Murray; Karla Zadnik
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-06-01       Impact factor: 4.799

2.  Genetically low vitamin D concentrations and myopic refractive error: a Mendelian randomization study.

Authors:  Gabriel Cuellar-Partida; Katie M Williams; Seyhan Yazar; Jeremy A Guggenheim; Alex W Hewitt; Cathy Williams; Jie Jin Wang; Pik-Fang Kho; Seang Mei Saw; Ching-Yu Cheng; Tien Yin Wong; Tin Aung; Terri L Young; J Willem L Tideman; Jost B Jonas; Paul Mitchell; Robert Wojciechowski; Dwight Stambolian; Pirro Hysi; Christopher J Hammond; David A Mackey; Robyn M Lucas; Stuart MacGregor
Journal:  Int J Epidemiol       Date:  2017-12-01       Impact factor: 7.196

Review 3.  Nature and nurture: the complex genetics of myopia and refractive error.

Authors:  R Wojciechowski
Journal:  Clin Genet       Date:  2010-12-13       Impact factor: 4.438

4.  Role of the hepatocyte growth factor gene in refractive error.

Authors:  Sundar Veerappan; Kelly K Pertile; Amirul F M Islam; Maria Schäche; Christine Y Chen; Paul Mitchell; Mohamed Dirani; Paul N Baird
Journal:  Ophthalmology       Date:  2009-12-14       Impact factor: 12.079

5.  A susceptibility locus for myopia in the normal population is linked to the PAX6 gene region on chromosome 11: a genomewide scan of dizygotic twins.

Authors:  Christopher J Hammond; Toby Andrew; Ying Tat Mak; Tim D Spector
Journal:  Am J Hum Genet       Date:  2004-06-24       Impact factor: 11.025

Review 6.  Origins of Refractive Errors: Environmental and Genetic Factors.

Authors:  Elise N Harb; Christine F Wildsoet
Journal:  Annu Rev Vis Sci       Date:  2019-09-15       Impact factor: 6.422

7.  Genome-wide association meta-analysis highlights light-induced signaling as a driver for refractive error.

Authors:  Milly S Tedja; Robert Wojciechowski; Pirro G Hysi; Nicholas Eriksson; Nicholas A Furlotte; Virginie J M Verhoeven; Adriana I Iglesias; Magda A Meester-Smoor; Stuart W Tompson; Qiao Fan; Anthony P Khawaja; Ching-Yu Cheng; René Höhn; Kenji Yamashiro; Adam Wenocur; Clare Grazal; Toomas Haller; Andres Metspalu; Juho Wedenoja; Jost B Jonas; Ya Xing Wang; Jing Xie; Paul Mitchell; Paul J Foster; Barbara E K Klein; Ronald Klein; Andrew D Paterson; S Mohsen Hosseini; Rupal L Shah; Cathy Williams; Yik Ying Teo; Yih Chung Tham; Preeti Gupta; Wanting Zhao; Yuan Shi; Woei-Yuh Saw; E-Shyong Tai; Xue Ling Sim; Jennifer E Huffman; Ozren Polašek; Caroline Hayward; Goran Bencic; Igor Rudan; James F Wilson; Peter K Joshi; Akitaka Tsujikawa; Fumihiko Matsuda; Kristina N Whisenhunt; Tanja Zeller; Peter J van der Spek; Roxanna Haak; Hanne Meijers-Heijboer; Elisabeth M van Leeuwen; Sudha K Iyengar; Jonathan H Lass; Albert Hofman; Fernando Rivadeneira; André G Uitterlinden; Johannes R Vingerling; Terho Lehtimäki; Olli T Raitakari; Ginevra Biino; Maria Pina Concas; Tae-Hwi Schwantes-An; Robert P Igo; Gabriel Cuellar-Partida; Nicholas G Martin; Jamie E Craig; Puya Gharahkhani; Katie M Williams; Abhishek Nag; Jugnoo S Rahi; Phillippa M Cumberland; Cécile Delcourt; Céline Bellenguez; Janina S Ried; Arthur A Bergen; Thomas Meitinger; Christian Gieger; Tien Yin Wong; Alex W Hewitt; David A Mackey; Claire L Simpson; Norbert Pfeiffer; Olavi Pärssinen; Paul N Baird; Veronique Vitart; Najaf Amin; Cornelia M van Duijn; Joan E Bailey-Wilson; Terri L Young; Seang-Mei Saw; Dwight Stambolian; Stuart MacGregor; Jeremy A Guggenheim; Joyce Y Tung; Christopher J Hammond; Caroline C W Klaver
Journal:  Nat Genet       Date:  2018-05-28       Impact factor: 38.330

8.  HGF-rs12536657 and Ocular Biometric Parameters in Hyperopic Children, Emmetropic Adolescents, and Young Adults: A Multicenter Quantitative Trait Study.

Authors:  Jesús Barrio-Barrio; Elvira Bonet-Farriol; Marta Galdós; Susana Noval; Victoria Pueyo; Charles E Breeze; Jose Luis Santos; Belén Alfonso-Bartolozzi; Sergio Recalde; Ana Patiño-García
Journal:  J Ophthalmol       Date:  2019-02-03       Impact factor: 1.909

9.  Hepatocyte growth factor and myopia: genetic association analyses in a Caucasian population.

Authors:  Tammy Yanovitch; Yi-Ju Li; Ravikanth Metlapally; Diana Abbott; Khanh-Nhat Tran Viet; Terri L Young
Journal:  Mol Vis       Date:  2009-05-20       Impact factor: 2.367

10.  Meta-analysis of 542,934 subjects of European ancestry identifies new genes and mechanisms predisposing to refractive error and myopia.

Authors:  Pirro G Hysi; Hélène Choquet; Anthony P Khawaja; Robert Wojciechowski; Milly S Tedja; Jie Yin; Mark J Simcoe; Karina Patasova; Omar A Mahroo; Khanh K Thai; Phillippa M Cumberland; Ronald B Melles; Virginie J M Verhoeven; Veronique Vitart; Ayellet Segre; Richard A Stone; Nick Wareham; Alex W Hewitt; David A Mackey; Caroline C W Klaver; Stuart MacGregor; Peng T Khaw; Paul J Foster; Jeremy A Guggenheim; Jugnoo S Rahi; Eric Jorgenson; Christopher J Hammond
Journal:  Nat Genet       Date:  2020-03-30       Impact factor: 38.330

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  1 in total

1.  GNB3 c.825C>T (rs5443) Polymorphism and Risk of Acute Cardiovascular Events after Renal Allograft Transplant.

Authors:  Tobias Peitz; Birte Möhlendick; Winfried Siffert; Falko Markus Heinemann; Andreas Kribben; Ute Eisenberger; Justa Friebus-Kardash
Journal:  Int J Mol Sci       Date:  2022-08-29       Impact factor: 6.208

  1 in total

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