Literature DB >> 34148167

MR-contrast-aware image-to-image translations with generative adversarial networks.

Jonas Denck1,2,3, Jens Guehring4, Andreas Maier5, Eva Rothgang6.   

Abstract

PURPOSE: A magnetic resonance imaging (MRI) exam typically consists of several sequences that yield different image contrasts. Each sequence is parameterized through multiple acquisition parameters that influence image contrast, signal-to-noise ratio, acquisition time, and/or resolution. Depending on the clinical indication, different contrasts are required by the radiologist to make a diagnosis. As MR sequence acquisition is time consuming and acquired images may be corrupted due to motion, a method to synthesize MR images with adjustable contrast properties is required.
METHODS: Therefore, we trained an image-to-image generative adversarial network conditioned on the MR acquisition parameters repetition time and echo time. Our approach is motivated by style transfer networks, whereas the "style" for an image is explicitly given in our case, as it is determined by the MR acquisition parameters our network is conditioned on.
RESULTS: This enables us to synthesize MR images with adjustable image contrast. We evaluated our approach on the fastMRI dataset, a large set of publicly available MR knee images, and show that our method outperforms a benchmark pix2pix approach in the translation of non-fat-saturated MR images to fat-saturated images. Our approach yields a peak signal-to-noise ratio and structural similarity of 24.48 and 0.66, surpassing the pix2pix benchmark model significantly.
CONCLUSION: Our model is the first that enables fine-tuned contrast synthesis, which can be used to synthesize missing MR-contrasts or as a data augmentation technique for AI training in MRI. It can also be used as basis for other image-to-image translation tasks within medical imaging, e.g., to enhance intermodality translation (MRI → CT) or 7 T image synthesis from 3 T MR images.

Keywords:  Deep learning; Generative adversarial networks; Image synthesis; Magnetic resonance imaging

Year:  2021        PMID: 34148167     DOI: 10.1007/s11548-021-02433-x

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  14 in total

1.  Musculoskeletal MRI at 3.0 T: relaxation times and image contrast.

Authors:  Garry E Gold; Eric Han; Jeff Stainsby; Graham Wright; Jean Brittain; Christopher Beaulieu
Journal:  AJR Am J Roentgenol       Date:  2004-08       Impact factor: 3.959

2.  New methods of MR image intensity standardization via generalized scale.

Authors:  Anant Madabhushi; Jayaram K Udupa
Journal:  Med Phys       Date:  2006-09       Impact factor: 4.071

3.  SUSAN: segment unannotated image structure using adversarial network.

Authors:  Fang Liu
Journal:  Magn Reson Med       Date:  2018-12-10       Impact factor: 4.668

4.  Ea-GANs: Edge-Aware Generative Adversarial Networks for Cross-Modality MR Image Synthesis.

Authors:  Biting Yu; Luping Zhou; Lei Wang; Yinghuan Shi; Jurgen Fripp; Pierrick Bourgeat
Journal:  IEEE Trans Med Imaging       Date:  2019-01-29       Impact factor: 10.048

5.  Image Synthesis in Multi-Contrast MRI With Conditional Generative Adversarial Networks.

Authors:  Salman Uh Dar; Mahmut Yurt; Levent Karacan; Aykut Erdem; Erkut Erdem; Tolga Cukur
Journal:  IEEE Trans Med Imaging       Date:  2019-02-26       Impact factor: 10.048

6.  fastMRI: A Publicly Available Raw k-Space and DICOM Dataset of Knee Images for Accelerated MR Image Reconstruction Using Machine Learning.

Authors:  Florian Knoll; Jure Zbontar; Anuroop Sriram; Matthew J Muckley; Mary Bruno; Aaron Defazio; Marc Parente; Krzysztof J Geras; Joe Katsnelson; Hersh Chandarana; Zizhao Zhang; Michal Drozdzalv; Adriana Romero; Michael Rabbat; Pascal Vincent; James Pinkerton; Duo Wang; Nafissa Yakubova; Erich Owens; C Lawrence Zitnick; Michael P Recht; Daniel K Sodickson; Yvonne W Lui
Journal:  Radiol Artif Intell       Date:  2020-01-29

7.  Five-minute knee MRI for simultaneous morphometry and T2 relaxometry of cartilage and meniscus and for semiquantitative radiological assessment using double-echo in steady-state at 3T.

Authors:  Akshay S Chaudhari; Marianne S Black; Susanne Eijgenraam; Wolfgang Wirth; Susanne Maschek; Bragi Sveinsson; Felix Eckstein; Edwin H G Oei; Garry E Gold; Brian A Hargreaves
Journal:  J Magn Reson Imaging       Date:  2017-11-01       Impact factor: 4.813

8.  Value of MRI in medicine: More than just another test?

Authors:  Edwin J R van Beek; Christiane Kuhl; Yoshimi Anzai; Patricia Desmond; Richard L Ehman; Qiyong Gong; Garry Gold; Vikas Gulani; Margaret Hall-Craggs; Tim Leiner; C C Tschoyoson Lim; James G Pipe; Scott Reeder; Caroline Reinhold; Marion Smits; Daniel K Sodickson; Clare Tempany; H Alberto Vargas; Meiyun Wang
Journal:  J Magn Reson Imaging       Date:  2018-08-25       Impact factor: 4.813

9.  Automated Billing Code Retrieval from MRI Scanner Log Data.

Authors:  Jonas Denck; Wilfried Landschütz; Knud Nairz; Johannes T Heverhagen; Andreas Maier; Eva Rothgang
Journal:  J Digit Imaging       Date:  2019-12       Impact factor: 4.056

10.  MRI Cross-Modality Image-to-Image Translation.

Authors:  Qianye Yang; Nannan Li; Zixu Zhao; Xingyu Fan; Eric I-Chao Chang; Yan Xu
Journal:  Sci Rep       Date:  2020-02-28       Impact factor: 4.379

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  2 in total

1.  Synthesizing pseudo-T2w images to recapture missing data in neonatal neuroimaging with applications in rs-fMRI.

Authors:  Sydney Kaplan; Anders Perrone; Dimitrios Alexopoulos; Jeanette K Kenley; Deanna M Barch; Claudia Buss; Jed T Elison; Alice M Graham; Jeffrey J Neil; Thomas G O'Connor; Jerod M Rasmussen; Monica D Rosenberg; Cynthia E Rogers; Aristeidis Sotiras; Damien A Fair; Christopher D Smyser
Journal:  Neuroimage       Date:  2022-03-11       Impact factor: 7.400

2.  Deep learning-based convolutional neural network for intramodality brain MRI synthesis.

Authors:  Alexander F I Osman; Nissren M Tamam
Journal:  J Appl Clin Med Phys       Date:  2022-01-19       Impact factor: 2.102

  2 in total

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