Literature DB >> 34134614

Transcriptomic coordination at hepatic steatosis indicates robust immune cell engagement prior to inflammation.

Youwen Zhang1, Ioulia Chatzistamou2, Hippokratis Kiaris3,4.   

Abstract

BACKGROUND: Deregulation in lipid metabolism leads to the onset of hepatic steatosis while at subsequent stages of disease development, the induction of inflammation, marks the transition of steatosis to non-alcoholic steatohepatitis. While differential gene expression unveils individual genes that are deregulated at different stages of disease development, how the whole transcriptome is deregulated in steatosis remains unclear.
METHODS: Using outbred deer mice fed with high fat as a model, we assessed the correlation of each transcript with every other transcript in the transcriptome. The onset of steatosis in the liver was also evaluated histologically.
RESULTS: Our results indicate that transcriptional reprogramming directing immune cell engagement proceeds robustly, even in the absence of histologically detectable steatosis, following administration of high fat diet. In the liver transcriptomes of animals with steatosis, a preference for the engagement of regulators of T cell activation and myeloid leukocyte differentiation was also recorded as opposed to the steatosis-free livers at which non-specific lymphocytic activation was seen. As compared to controls, in the animals with steatosis, transcriptome was subjected to more widespread reorganization while in the animals without steatosis, reorganization was less extensive. Comparison of the steatosis and non-steatosis livers showed high retention of coordination suggesting that diet supersedes pathology in shaping the transcriptome's profile.
CONCLUSIONS: This highly versatile strategy suggests that the molecular changes inducing inflammation proceed robustly even before any evidence of steatohepatitis is recorded, either histologically or by differential expression analysis.

Entities:  

Keywords:  Correlation network; Liver; Pathogenesis; Peromyscus; Transcriptional coordination

Year:  2021        PMID: 34134614     DOI: 10.1186/s12864-021-07784-y

Source DB:  PubMed          Journal:  BMC Genomics        ISSN: 1471-2164            Impact factor:   3.969


  24 in total

Review 1.  Peromyscus as a model of human disease.

Authors:  Amanda Havighorst; Janet Crossland; Hippokratis Kiaris
Journal:  Semin Cell Dev Biol       Date:  2016-06-29       Impact factor: 7.727

Review 2.  Human fatty liver disease: old questions and new insights.

Authors:  Jonathan C Cohen; Jay D Horton; Helen H Hobbs
Journal:  Science       Date:  2011-06-24       Impact factor: 47.728

3.  Coordination Analysis of Gene Expression Points to the Relative Impact of Different Regulators During Endoplasmic Reticulum Stress.

Authors:  Youwen Zhang; Matthew D Lucius; Diego Altomare; Amanda Havighorst; Elena Farmaki; Ioulia Chatzistamou; Michael Shtutman; Hippokratis Kiaris
Journal:  DNA Cell Biol       Date:  2019-08-06       Impact factor: 3.311

4.  Coordination in the unfolded protein response during aging in outbred deer mice.

Authors:  E Soltanmohammadi; E Farmaki; Y Zhang; A Naderi; V Kaza; I Chatzistamou; H Kiaris
Journal:  Exp Gerontol       Date:  2020-12-05       Impact factor: 4.032

5.  Coordination of the unfolded protein response during hepatic steatosis identifies CHOP as a specific regulator of hepatocyte ballooning.

Authors:  Y Zhang; I Chatzistamou; H Kiaris
Journal:  Cell Stress Chaperones       Date:  2020-06-23       Impact factor: 3.667

Review 6.  Mouse Models of Nonalcoholic Steatohepatitis: Toward Optimization of Their Relevance to Human Nonalcoholic Steatohepatitis.

Authors:  Geoff Farrell; Jörn M Schattenberg; Isabelle Leclercq; Matthew M Yeh; Robert Goldin; Narci Teoh; Detlef Schuppan
Journal:  Hepatology       Date:  2019-05       Impact factor: 17.425

Review 7.  Triggering and resolution of inflammation in NASH.

Authors:  Susanne Schuster; Daniel Cabrera; Marco Arrese; Ariel E Feldstein
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2018-06       Impact factor: 46.802

8.  Hepatic expression patterns of inflammatory and immune response genes associated with obesity and NASH in morbidly obese patients.

Authors:  Adeline Bertola; Stéphanie Bonnafous; Rodolphe Anty; Stéphanie Patouraux; Marie-Christine Saint-Paul; Antonio Iannelli; Jean Gugenheim; Jonathan Barr; José M Mato; Yannick Le Marchand-Brustel; Albert Tran; Philippe Gual
Journal:  PLoS One       Date:  2010-10-22       Impact factor: 3.240

9.  Key Inflammatory Processes in Human NASH Are Reflected in Ldlr-/-.Leiden Mice: A Translational Gene Profiling Study.

Authors:  Martine C Morrison; Robert Kleemann; Arianne van Koppen; Roeland Hanemaaijer; Lars Verschuren
Journal:  Front Physiol       Date:  2018-02-23       Impact factor: 4.566

Review 10.  Pathogenesis of Nonalcoholic Steatohepatitis: An Overview.

Authors:  Gopanandan Parthasarathy; Xavier Revelo; Harmeet Malhi
Journal:  Hepatol Commun       Date:  2020-01-14
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  1 in total

1.  Propensity to endoplasmic reticulum stress in deer mouse fibroblasts predicts skin inflammation and body weight gain.

Authors:  Youwen Zhang; Chang-Uk Lim; Vitali Sikirzhytski; Asieh Naderi; Ioulia Chatzistamou; Hippokratis Kiaris
Journal:  Dis Model Mech       Date:  2021-10-18       Impact factor: 5.758

  1 in total

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