Literature DB >> 34132583

RPAcan3990: an Ultrasensitive Recombinase Polymerase Assay To Detect Angiostrongylus cantonensis DNA.

William J Sears1, Yvonne Qvarnstrom2, Thomas B Nutman1.   

Abstract

Angiostrongylus cantonensis is one of the leading causes of eosinophilic meningitis worldwide. A field-deployable molecular detection method could enhance both environmental surveillance and clinical diagnosis of this emerging pathogen. Accordingly, RPAcan3990, a recombinase polymerase assay (RPA), was developed to target a region predicted to be highly repeated in the A. cantonensis genome. The assay was then adapted to produce a visually interpretable fluorescent readout using an orange camera lens filter and a blue light. Using A. cantonensis genomic DNA, the limit of detection was found to be 1 fg/μl by both fluorometer measurement and visual reading. All clinical samples known to be positive for A. cantonensis from various areas of the globe were positive by RPAcan3990. Cerebrospinal fluid samples from other etiologies of eosinophilic meningitis (i.e., Toxocara sp. and Gnathostoma sp.) were negative in the RPAcan3990 assay. The optimal incubation temperature range for the reaction was between 35°C and 40°C. The assay successfully detected 1 fg/μl of A. cantonensis genomic DNA after incubation at human body temperature (in a shirt pocket). In conclusion, these data suggest RPAcan3990 is potentially a point-of-contact molecular assay capable of sensitively detecting A. cantonensis by producing visually interpretable results with minimal instrumentation.

Entities:  

Keywords:  Angiostrongylus; DNA; detection; meningitis; recombinase polymerase assay

Mesh:

Substances:

Year:  2021        PMID: 34132583      PMCID: PMC8373011          DOI: 10.1128/JCM.01185-21

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  16 in total

Review 1.  Review: a comprehensive summary of a decade development of the recombinase polymerase amplification.

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2.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

Authors:  R K Saiki; D H Gelfand; S Stoffel; S J Scharf; R Higuchi; G T Horn; K B Mullis; H A Erlich
Journal:  Science       Date:  1988-01-29       Impact factor: 47.728

3.  Development of a recombinase polymerase amplification (RPA-EXO) and lateral flow assay (RPA-LFA) based on the ITS1 gene for the detection of Angiostrongylus cantonensis in gastropod intermediate hosts.

Authors:  Susan I Jarvi; Elizabeth S Atkinson; Lisa M Kaluna; Kirsten A Snook; Argon Steel
Journal:  Parasitology       Date:  2020-11-04       Impact factor: 3.234

Review 4.  Advances in Diagnostic Methods for Zika Virus Infection.

Authors:  Carlos A Herrada; Md Alamgir Kabir; Rommel Altamirano; Waseem Asghar
Journal:  J Med Device       Date:  2018-11-05       Impact factor: 0.582

5.  Geographic distribution of Angiostrongylus cantonensis in wild rats (Rattus rattus) and terrestrial snails in Florida, USA.

Authors:  Heather D Stockdale Walden; John D Slapcinsky; Shannon Roff; Jorge Mendieta Calle; Zakia Diaz Goodwin; Jere Stern; Rachel Corlett; Julia Conway; Antoinette McIntosh
Journal:  PLoS One       Date:  2017-05-18       Impact factor: 3.240

Review 6.  Molecular-based isothermal tests for field diagnosis of malaria and their potential contribution to malaria elimination.

Authors:  Eniyou C Oriero; Jan Jacobs; Jean-Pierre Van Geertruyden; Davis Nwakanma; Umberto D'Alessandro
Journal:  J Antimicrob Chemother       Date:  2014-09-15       Impact factor: 5.790

7.  Real-Time Polymerase Chain Reaction Detection of Angiostrongylus cantonensis DNA in Cerebrospinal Fluid from Patients with Eosinophilic Meningitis.

Authors:  Yvonne Qvarnstrom; Maniphet Xayavong; Ana Cristina Aramburu da Silva; Sarah Y Park; A Christian Whelen; Precilia S Calimlim; Rebecca H Sciulli; Stacey A A Honda; Karen Higa; Paul Kitsutani; Nora Chea; Seng Heng; Stuart Johnson; Carlos Graeff-Teixeira; LeAnne M Fox; Alexandre J da Silva
Journal:  Am J Trop Med Hyg       Date:  2015-11-02       Impact factor: 2.345

Review 8.  Advanced DNA-Based Point-of-Care Diagnostic Methods for Plant Diseases Detection.

Authors:  Han Yih Lau; Jose R Botella
Journal:  Front Plant Sci       Date:  2017-12-06       Impact factor: 5.753

Review 9.  Recombinase polymerase amplification: Basics, applications and recent advances.

Authors:  Ivan Magriñá Lobato; Ciara K O'Sullivan
Journal:  Trends Analyt Chem       Date:  2017-10-26       Impact factor: 12.296

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