Literature DB >> 34132460

Real-time quantitative PCR: A tool for absolute and relative quantification.

Ravikumar Harshitha1, Duraipandian Rex Arunraj1.   

Abstract

Real-time quantitative PCR is a technique used to monitor the PCR reaction in real time. RT-qPCR is broadly classified into two types based on its purpose: absolute and relative quantification. Absolute quantification is used in a wide array of fields such as microbiology, food technology, and biotechnology to quantify the microbiological load/adulterants in a commodity/copy numbers respectively, whereas Relative quantification is used in the field of genomics and functional transcriptomics to perform gene expression analysis in biological experiments. A laboratory work that covers the basic principles involved in RT-qPCR and data analysis using the manual as well as the software methods are incorporated. The laboratory experiment was designed to provide insights on certain important principles such as primer characteristics, PCR efficiency, and melt curve analysis. This laboratory exercise provides all the significant components of RT-qPCR, which can be useful while performing an experiment in an undergraduate and graduate laboratory.
© 2021 International Union of Biochemistry and Molecular Biology.

Entities:  

Keywords:  PCR efficiency; absolute and relative quantification; copy number; fold change; quantitative real time PCR

Mesh:

Year:  2021        PMID: 34132460     DOI: 10.1002/bmb.21552

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.160


  2 in total

1.  Identification of reference genes and their validation for gene expression analysis in phytopathogenic fungus Macrophomina phaseolina.

Authors:  Adriana Orrego; María Cecilia Gavilán; Aníbal Arévalos; Belén Ortíz; Belén Gaete Humada; Amiliana Pineda-Fretez; María Cristina Romero-Rodríguez; María Eugenia Flores Giubi; Man Mohan Kohli; Julio C M Iehisa
Journal:  PLoS One       Date:  2022-08-05       Impact factor: 3.752

2.  Comparative Transcriptome Analysis Reveals Hormone Signal Transduction and Sucrose Metabolism Related Genes Involved in the Regulation of Anther Dehiscence in Photo-Thermo-Sensitive Genic Male Sterile Wheat.

Authors:  Tianbao Zhang; Shaohua Yuan; Zihan Liu; Liqing Luo; Haoyu Guo; Yanmei Li; Jianfang Bai; Changping Zhao; Liping Zhang
Journal:  Biomolecules       Date:  2022-08-20
  2 in total

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