Literature DB >> 34131277

Establishment of chemically oligomerizable TAR DNA-binding protein-43 which mimics amyotrophic lateral sclerosis pathology in mammalian cells.

Yoshiaki Yamanaka1, Tamami Miyagi1, Yuichiro Harada1, Masahiko Kuroda2, Kohsuke Kanekura3.   

Abstract

One of the pathological hallmarks of amyotrophic lateral sclerosis (ALS) is mislocalized, cytosolic aggregation of TAR DNA-Binding Protein-43 (TDP-43). Not only TDP-43 per se is a causative gene of ALS but also mislocalization and aggregation of TDP-43 seems to be a common pathological change in both sporadic and familial ALS. The mechanism how nuclear TDP-43 transforms into cytosolic aggregates remains elusive, but recent studies using optogenetics have proposed that aberrant liquid-liquid phase separation (LLPS) of TDP-43 links to the aggregation process, leading to cytosolic distribution. Although LLPS plays an important role in the aggregate formation, there are still several technical problems in the optogenetic technique to be solved to progress further in vivo study. Here we report a chemically oligomerizable TDP-43 system. Oligomerization of TDP-43 was achieved by a small compound AP20187, and oligomerized TDP-43 underwent aggregate formation, followed by cytosolic mislocalization and induction of cell toxicity. The mislocalized TDP-43 co-aggregated with wt-TDP-43, Fused-in-sarcoma (FUS), TIA1 and sequestosome 1 (SQSTM1)/p62, mimicking ALS pathology. The chemically oligomerizable TDP-43 also revealed the roles of the N-terminal domain, RNA-recognition motif, nuclear export signal and low complexity domain in the aggregate formation and mislocalization of TDP-43. The aggregate-prone properties of TDP-43 were enhanced by a familial ALS-causative mutation. In conclusion, the chemically oligomerizable TDP-43 system could be useful to study the mechanisms underlying the droplet-aggregation phase transition and cytosolic mislocalization of TDP-43 in ALS and further study in vivo.
© 2021. The Author(s), under exclusive licence to United States and Canadian Academy of Pathology.

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Year:  2021        PMID: 34131277     DOI: 10.1038/s41374-021-00623-4

Source DB:  PubMed          Journal:  Lab Invest        ISSN: 0023-6837            Impact factor:   5.502


  44 in total

1.  Stress Induces Dynamic, Cytotoxicity-Antagonizing TDP-43 Nuclear Bodies via Paraspeckle LncRNA NEAT1-Mediated Liquid-Liquid Phase Separation.

Authors:  Chen Wang; Yongjia Duan; Gang Duan; Qiangqiang Wang; Kai Zhang; Xue Deng; Beituo Qian; Jinge Gu; Zhiwei Ma; Shuang Zhang; Lin Guo; Cong Liu; Yanshan Fang
Journal:  Mol Cell       Date:  2020-07-03       Impact factor: 17.970

2.  Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.

Authors:  Manuela Neumann; Deepak M Sampathu; Linda K Kwong; Adam C Truax; Matthew C Micsenyi; Thomas T Chou; Jennifer Bruce; Theresa Schuck; Murray Grossman; Christopher M Clark; Leo F McCluskey; Bruce L Miller; Eliezer Masliah; Ian R Mackenzie; Howard Feldman; Wolfgang Feiden; Hans A Kretzschmar; John Q Trojanowski; Virginia M-Y Lee
Journal:  Science       Date:  2006-10-06       Impact factor: 47.728

Review 3.  Causative Genes in Amyotrophic Lateral Sclerosis and Protein Degradation Pathways: a Link to Neurodegeneration.

Authors:  C Maurel; A Dangoumau; S Marouillat; C Brulard; A Chami; R Hergesheimer; P Corcia; H Blasco; C R Andres; P Vourc'h
Journal:  Mol Neurobiol       Date:  2018-01-10       Impact factor: 5.590

4.  TDP-43 is a component of ubiquitin-positive tau-negative inclusions in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.

Authors:  Tetsuaki Arai; Masato Hasegawa; Haruhiko Akiyama; Kenji Ikeda; Takashi Nonaka; Hiroshi Mori; David Mann; Kuniaki Tsuchiya; Mari Yoshida; Yoshio Hashizume; Tatsuro Oda
Journal:  Biochem Biophys Res Commun       Date:  2006-10-30       Impact factor: 3.575

5.  Loss of nuclear TDP-43 in amyotrophic lateral sclerosis (ALS) causes altered expression of splicing machinery and widespread dysregulation of RNA splicing in motor neurones.

Authors:  J Robin Highley; Janine Kirby; Joeri A Jansweijer; Philip S Webb; Channa A Hewamadduma; Paul R Heath; Adrian Higginbottom; Rohini Raman; Laura Ferraiuolo; Johnathan Cooper-Knock; Christopher J McDermott; Stephen B Wharton; Pamela J Shaw; Paul G Ince
Journal:  Neuropathol Appl Neurobiol       Date:  2014-10       Impact factor: 8.090

6.  Functional and dynamic polymerization of the ALS-linked protein TDP-43 antagonizes its pathologic aggregation.

Authors:  Tariq Afroz; Eva-Maria Hock; Patrick Ernst; Chiara Foglieni; Melanie Jambeau; Larissa A B Gilhespy; Florent Laferriere; Zuzanna Maniecka; Andreas Plückthun; Peer Mittl; Paolo Paganetti; Frédéric H T Allain; Magdalini Polymenidou
Journal:  Nat Commun       Date:  2017-06-29       Impact factor: 14.919

7.  Regulation of RNA editing by RNA-binding proteins in human cells.

Authors:  Giovanni Quinones-Valdez; Stephen S Tran; Hyun-Ik Jun; Jae Hoon Bahn; Ei-Wen Yang; Lijun Zhan; Anneke Brümmer; Xintao Wei; Eric L Van Nostrand; Gabriel A Pratt; Gene W Yeo; Brenton R Graveley; Xinshu Xiao
Journal:  Commun Biol       Date:  2019-01-14

8.  TDP-43 mutations in familial and sporadic amyotrophic lateral sclerosis.

Authors:  Jemeen Sreedharan; Ian P Blair; Vineeta B Tripathi; Xun Hu; Caroline Vance; Boris Rogelj; Steven Ackerley; Jennifer C Durnall; Kelly L Williams; Emanuele Buratti; Francisco Baralle; Jacqueline de Belleroche; J Douglas Mitchell; P Nigel Leigh; Ammar Al-Chalabi; Christopher C Miller; Garth Nicholson; Christopher E Shaw
Journal:  Science       Date:  2008-02-28       Impact factor: 47.728

9.  ALS-linked TDP-43 mutations produce aberrant RNA splicing and adult-onset motor neuron disease without aggregation or loss of nuclear TDP-43.

Authors:  Eveline S Arnold; Shuo-Chien Ling; Stephanie C Huelga; Clotilde Lagier-Tourenne; Magdalini Polymenidou; Dara Ditsworth; Holly B Kordasiewicz; Melissa McAlonis-Downes; Oleksandr Platoshyn; Philippe A Parone; Sandrine Da Cruz; Kevin M Clutario; Debbie Swing; Lino Tessarollo; Martin Marsala; Christopher E Shaw; Gene W Yeo; Don W Cleveland
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

10.  TDP-43 regulates transcription at protein-coding genes and Alu retrotransposons.

Authors:  Andrés A Morera; Nasiha S Ahmed; Jacob C Schwartz
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-10-23       Impact factor: 6.304

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  1 in total

1.  Chemically oligomerizable TDP-43: a novel chemogenetic tool for studying the pathophysiology of amyotrophic lateral sclerosis.

Authors:  Kohsuke Kanekura; Yoshiaki Yamanaka; Tamami Miyagi; Masahiko Kuroda
Journal:  Neural Regen Res       Date:  2022-11       Impact factor: 6.058

  1 in total

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