Literature DB >> 3412476

Elbow motion in the immunoglobulins involves a molecular ball-and-socket joint.

A M Lesk1, C Chothia.   

Abstract

Studies by electron microscopy, fluorescence polarization, hydro-dynamics and X-ray crystallography have demonstrated the ability of different parts of immunoglobulin molecules to move relative to each other. This movement facilitates the multiple interactions that antibodies make with polyvalent antigens and effector proteins. Comparisons of the atomic structures of immunoglobulins of the same sequence in different crystal environments, and of those with different sequences, have shown that the movements involve local changes in the conformation of the peptides linking different domains. These changes occur in (1) the hinge regions that link the Fab fragment to the Fc, and (2) the switch regions that link the VL-VH dimer to the CL-CH1 dimer. We show here that in immunoglobulins of known structure, the movement of the VL-VH dimer relative to the CL-CH1 dimer also involves the interactions of three VH and two CH1 residues that form the molecular equivalent of a ball-and-socket joint. The almost absolute conservation in the sequences of immunoglobulins and T-cell receptors of the residues that form these interactions suggests that this is a general feature of functional importance.

Entities:  

Mesh:

Substances:

Year:  1988        PMID: 3412476     DOI: 10.1038/335188a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  30 in total

1.  A relation between the principal axes of inertia and ligand binding.

Authors:  J Foote; A Raman
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-01       Impact factor: 11.205

2.  Three quaternary structures for a single protein.

Authors:  D B Huang; C F Ainsworth; F J Stevens; M Schiffer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-09       Impact factor: 11.205

3.  Effective function annotation through catalytic residue conservation.

Authors:  Richard A George; Ruth V Spriggs; Gail J Bartlett; Alex Gutteridge; Malcolm W MacArthur; Craig T Porter; Bissan Al-Lazikani; Janet M Thornton; Mark B Swindells
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-21       Impact factor: 11.205

4.  Protein flexibility: coordinate uncertainties and interpretation of structural differences.

Authors:  Alexander A Rashin; Abraham H L Rashin; Robert L Jernigan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-10-22

5.  Single-particle selection and alignment with heavy atom cluster-antibody conjugates.

Authors:  G J Jensen; R D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

6.  A database of macromolecular motions.

Authors:  M Gerstein; W Krebs
Journal:  Nucleic Acids Res       Date:  1998-09-15       Impact factor: 16.971

7.  Can immunoglobulin C(H)1 constant region domain modulate antigen binding affinity of antibodies?

Authors:  O Pritsch; G Hudry-Clergeon; M Buckle; Y Petillot; J P Bouvet; J Gagnon; G Dighiero
Journal:  J Clin Invest       Date:  1996-11-15       Impact factor: 14.808

8.  The rational design of allosteric interactions in a monomeric protein and its applications to the construction of biosensors.

Authors:  J S Marvin; E E Corcoran; N A Hattangadi; J V Zhang; S A Gere; H W Hellinga
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-29       Impact factor: 11.205

9.  Mutational landscape of antibody variable domains reveals a switch modulating the interdomain conformational dynamics and antigen binding.

Authors:  Patrick Koenig; Chingwei V Lee; Benjamin T Walters; Vasantharajan Janakiraman; Jeremy Stinson; Thomas W Patapoff; Germaine Fuh
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-05       Impact factor: 11.205

10.  PeptiSite: a structural database of peptide binding sites in 4D.

Authors:  Chayan Acharya; Irina Kufareva; Andrey V Ilatovskiy; Ruben Abagyan
Journal:  Biochem Biophys Res Commun       Date:  2014-01-06       Impact factor: 3.575

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.