Literature DB >> 34123576

Prognostic image-based quantification of CD8CD103 T cell subsets in high-grade serous ovarian cancer patients.

S T Paijens1, A Vledder1, D Loiero2, E W Duiker3, J Bart3, A M Hendriks4, M Jalving4, H H Workel1, H Hollema3, N Werner3, A Plat1, G B A Wisman1, R Yigit1, H Arts1, A J Kruse5, N M de Lange5, V H Koelzer2, M de Bruyn1, H W Nijman1.   

Abstract

CD103-positive tissue resident memory-like CD8+ T cells (CD8CD103 TRM) are associated with improved prognosis across malignancies, including high-grade serous ovarian cancer (HGSOC). However, whether quantification of CD8, CD103 or both is required to improve existing survival prediction and whether all HGSOC patients or only specific subgroups of patients benefit from infiltration, remains unclear. To address this question, we applied image-based quantification of CD8 and CD103 multiplex immunohistochemistry in the intratumoral and stromal compartments of 268 advanced-stage HGSOC patients from two independent clinical institutions. Infiltration of CD8CD103 immune cell subsets was independent of clinicopathological factors. Our results suggest CD8CD103 TRM quantification as a superior method for prognostication compared to single CD8 or CD103 quantification. A survival benefit of CD8CD103 TRM was observed only in patients treated with primary cytoreductive surgery. Moreover, survival benefit in this group was limited to patients with no macroscopic tumor lesions after surgery. This approach provides novel insights into prognostic stratification of HGSOC patients and may contribute to personalized treatment strategies in the future.
© 2021 The Author(s). Published with license by Taylor & Francis Group, LLC.

Entities:  

Keywords:  CD8CD103 t cell; digital quantification; high grade serous ovarian cancer; overall survival; prognosis; tissue resident memory t cells

Mesh:

Year:  2021        PMID: 34123576      PMCID: PMC8183551          DOI: 10.1080/2162402X.2021.1935104

Source DB:  PubMed          Journal:  Oncoimmunology        ISSN: 2162-4011            Impact factor:   8.110


Introduction

High-grade serous ovarian cancer (HGSOC) is the most common histological subtype of epithelial ovarian cancer (EOC) and considered to originate from the fallopian tubes.[1] Advanced stage HGSOC has a poor prognosis, with a 5-year survival rate of 25–40%.[2,3] Current primary treatment consists of cytoreductive surgery and chemotherapy, in most cases carboplatin with paclitaxel.[4] Patients are either treated with primary debulking surgery followed by six cycles of adjuvant chemotherapy (PDS) or are initially treated with three cycles of neo-adjuvant chemotherapy, followed by interval debulking surgery and three additional cycles of adjuvant chemotherapy (NACT). Choice of treatment strategy is tailored for each individual patient. Patients are selected for PDS based on the estimation whether the entire tumor load can be removed during surgery, taking into account tumor location, presence of metastases and clinical condition of the patient. If not feasible, NACT is used to reduce tumor burden prior to interval debulking. The most important prognostic factors are primary treatment strategy (PDS or NACT) and surgical outcome. Surgical outcome is defined as complete (no residual macroscopic tumor tissue after surgery), optimal (residual tumor lesions <1 cm after surgery) or incomplete (residual tumor lesions >1 cm after surgery). Although up to 75% of all HGSOC patients initially have a favorable response to primary treatment, comprising chemotherapy and surgery, most patients relapse within 2 years, with a median progression-free survival (PFS) of 12 months.[5] It has been well established that the presence of tumor infiltrating lymphocytes (TILs) represents an additional favorable prognostic indicator in many solid tumors including HGSOC.[6-8] In particular, a specific subset of CD8+ T cells, known as tissue resident memory-like T cells (TRM), is associated with prognostic benefit in HGSOC.[9-11] TRM are characterized by the expression of CD103, also known as integrin αEβ7 (ITGAE). CD103 interacts with E-cadherin, often expressed on epithelial tumor cells, thereby facilitating the interaction between the CD8+ T cells and the tumor epithelium. CD103 is therefore often used to distinguish intra-epithelial and stromal CD8+ T cells.[12] Functional studies have shown that CD8CD103 TRM cells can secrete pro-inflammatory cytokines such as Interferon-γ (IFNγ), tumor necrosis factor-α, and express cytotoxic molecules granzyme A and B.[13,14] In addition, as previously demonstrated by our group, CD8CD103 TRM cells also produce CXCL13, a crucial chemokine involved in the development of tertiary lymphoid structures (TLS).[15] In order to translate CD8CD103 TRM quantity and location into a diagnostic tool, the development of immune scores are needed. However, manual TIL quantification by pathologists is hampered by interobserver variability and is time-consuming.[16] The rise of digital pathology, including image-based quantification and machine learning algorithms, provides an opportunity to overcome these limitations. Machine learning algorithms apply statistical methods to process data and have shown to be reproducible and reliable for the analysis of tissue composition in cancer.[17] The deep characterization of the tumor microenvironment, through spatial analysis and multiplexing, makes image-based quantification an efficient tool to extract comprehensive information on biomarker expression levels, co-localization, and compartmentalization.[18,19] Horeweg et al. demonstrated the successful application of image-based CD8CD103 TRM quantification in early-stage endometrial cancer, by demonstrating concordance between automatic machine learning and assessment by expert pathologists. The study showed greater sensitivity of automatic machine learning compared to manual quantification.[20] In this study, we applied the same innovative image-based quantification technique as Horeweg et al. to address the questions; whether CD8, CD103 or both markers need to be quantified for optimal prognostication in HGSOC; and whether all HGSOC patients or only specific subgroups of patients benefit from infiltration. We demonstrate that the prognostic benefit of CD8CD103 TRM infiltration in HGSOC is restricted to PDS treated patients with a complete debulking.

Methods

Patient selection

A recoded database was created containing information on clinico-pathological characteristics and follow-up of patients diagnosed with advanced stage HGSOC at the University Medical Center Groningen (Groningen, The Netherlands) and Isala hospital Zwolle (Zwolle, The Netherlands) between January 2008 and January 2017. Patients were staged according to international Federation of Gynecology and Obstetrics (FIGO) criteria 2014 based on World Health Organization (WHO) guidelines. One of the gynecologic pathologist (EWD, JB, NW, HH) confirmed the histological subtype based on morphology, and when available P53 immunohistochemistry staining. Subsequently, the presence of tumor tissue was confirmed on H&E slides and representative locations with tumor tissue were selected for tissue microarray (TMA) construction. Patients were included if sufficient formalin-fixed paraffin embedded (FFPE) ovarian or omentum tumor tissue was available. Tissue was obtained either from primary debulking surgery or interval debulking surgery. From a total of 409 patients that were screened, 268 patients (65.5%) were included, follow-up survival data were available for 240 included patients of which 2 patients had an unknown surgical outcome. Of the 141 excluded patients follow-up, survival data were available for 92 of the patients (Supplementary Figure 1). The main reason for exclusion was the unavailability of viable tumor tissue. Approximately 80% of the excluded patients were primarily treated with NACT (Supplementary Table 1). Since these excluded NACT patients might represent ‘best responders to chemotherapy’, we analyzed overall survival (OS) in the exclusion versus inclusion cohort. We observed a prolonged survival for the included NACT patients compared to the excluded NACT patients (Supplementary Figure 2(b)). Within PDS-treated patients, no difference in OS was observed between included or excluded patients (Supplementary Figure 2(a)). In total (n = 268), FFPE tissue of 191 advanced-stage HGSOC patients at the UMCG and 77 HGSOC patients at the Isala was available for the construction of a TMA. For 210 patients both infiltration density and survival data were available, of which 2 patients had an unknown surgical outcome (Supplementary Figure 1). OS was calculated from the date of initial treatment (either primary surgery or first cycle of neo-adjuvant chemotherapy) and was last updated in July 2020.

Tissue micro-array

Triplicate cores with a diameter of 1 mm were taken from each FFPE block and placed in a recipient block using a tissue microarrayer (Beecher instruments, Silver Spring, USA). Both normal and tumor tissue were included as orientation cores and controls. From each TMA block, 3-μm-thick sections were cut and applied to APES-coated slides (Starfrost, Braunschweig, Germany).

Immunohistochemistry staining

FFPE slides were de-paraffinized and rehydrated in graded ethanol. Antigen retrieval was initiated with a preheated 10 mM citrate buffer (pH = 6). Endogenous peroxidase was blocked with a 0.3% H2O2 solution (0.5 mL 30% H202 in 50 mL PBS) for 30 minutes at room temperature. The primary antibodies against CD8 (1:50, Agilent/Dako, M710301-2) and CD103 (1:200, CD103; ab129202) were diluted in phosphate buffered saline (PBS)(PBS + 1% BSA + 1% AB serum; total 80 µL) and, slides were incubated overnight at 4°C. Next, the slides were incubated with two secondary antibodies, first with envision+/HRP anti-rabbit (2 drops, K400311-2P), followed by secondary antibody immPRESS-AP mouse (MP-5402-15), both for 30 min at room temperature. For visualization, StayYellow/HRP (Abcam, ab169561) and Fast Red Substrate kit (Abcam, ab64254) were used according to manufacturers’ instructions. Appropriate washing steps with PBS, tris-buffered saline with 0,1% Tween and demi water were performed between incubation steps. Sections were mounted with Eukitt quick-hardening mounting medium (Sigma Aldrich, Steinheim, Germany), and scanned on a Hamamatsu digital slide scanner (Hamamatsu photonics, Hamamatsu, Japan). Representative staining images are depicted in supplementary Figure 3.

Image-based quantification of CD8CD103 immune cell subsets

All digital slides were reviewed by two pathologists (DL and VHK) and spots with staining artifacts, folds or less than 50% viable tissue/core were excluded from analysis. The digital image analysis was carried out using HALO digital image analysis software version v3.0.311.167 (Indica Labs, Corrales, NM, USA). Specifically, TMA slides were de-arrayed into individual spot images of each tissue sample linked to clinical annotations. To localize and quantify tumor and stroma tissue, a deep neural network algorithm was trained using the Deep Net architecture. Necrosis, erythrocyte aggregates, and glass background were excluded. Graphical overlays were generated for each tissue class and the classification accuracy was reviewed. The total area of each tissue class was quantified in mm2. Cell detection, segmentation and staining quantification for Nuclei (Hematoxylin, RGB 57, 49, 137), CD8 (Fast Red, RGB 203, 64, 122), and CD103 (StayYellow, RGB 216, 173, 81) were performed in the tumor and stromal compartment. CD8 and CD103 were classified as positive if staining intensity in the cytoplasmic compartment exceeded internal controls (nonimmune cells in same tissue) as validated by pathologist review. The total tissue area in the tumor and stromal compartment and the absolute and % number of CD8 and CD103 single and double-positive cells were recorded (Figure 1). CD8 and CD103 infiltration density (marker-positive cells/mm2) was calculated across all cores of each individual case and analyzed with clinico-pathological parameters.
Figure 1.

Schematic illustration of CD8CD103 quantification method. A digital image of CD8CD103 multiplex immunohistochemistry stained tissue was analyzed using a deep neural network algorithm, trained to distinguish the epithelial and stromal compartments. Stromal and epithelial compartments were combined to assess the unsegmented tissue (intratumoral). Quantification of CD8+CD103- (single CD8) and CD8-CD103+ (single CD103) and double positive CD8+CD103+ (CD8CD103 TRM) cells were recorded. Single CD8 and CD103 infiltration density (marker-positive cells / mm2) was calculated across all cores of each individual case. All scores were integrated into 15 endscores

Schematic illustration of CD8CD103 quantification method. A digital image of CD8CD103 multiplex immunohistochemistry stained tissue was analyzed using a deep neural network algorithm, trained to distinguish the epithelial and stromal compartments. Stromal and epithelial compartments were combined to assess the unsegmented tissue (intratumoral). Quantification of CD8+CD103- (single CD8) and CD8-CD103+ (single CD103) and double positive CD8+CD103+ (CD8CD103 TRM) cells were recorded. Single CD8 and CD103 infiltration density (marker-positive cells / mm2) was calculated across all cores of each individual case. All scores were integrated into 15 endscores

Statistical analysis

Statistical analyses were performed using IBM SPSS Statistics for Windows, version 23 (IBM Corp., Armonk, N.Y., USA) and R (version 3.6.2). For analysis, immune cell densities were log2 transformed. Clustering of cases was done by hierarchical clustering using Ward’s minimum variance method in R using package pheatmap (https://cran.r-project.org/web/packages/pheatmap/index.html). Correlations between CD8CD103 TRM cells and clinical and histopathological variables were analyzed using Multiple regression analysis in SPSS. Independent prognostic value of CD8CD103 TRM cells was analyzed using Multivariate Cox analysis in SPSS. Analyses of OS as a function of immune cell density were performed by Cox proportional hazards models in R using packages RMS (https://cran.r-project.org/web/packages/rms/index.html) and survival (https://cran.r-project.org/web/packages/survival/index.html), and plotted using package ggPlot2 (https://cran.r-project.org/web/packages/ggplot2/index.html). Proportionality of hazards was confirmed by scaled Schoenfeld residuals. Exploratory analysis of the optimal cutoff was determined in R using package Survminer https://cran.r-project.org/web/packages/survminer/index.html). Survival curves were plotted in R using Survminer by using the Kaplan–Meier method. A p-value of <0.05 was used as cutoff for significance.

Ethical review

Patient data were retrieved from the institutional database into a new recoded database, in which patient identity was protected by unique patient codes. According to Dutch law, the institutional review board approved the use of the no-objection procedure for further-use biobank and databank (METc 2018.543).

Results

Cohort description

In total, 268 advanced-stage HGSOC patients were included. Patient characteristics from the two participating centers were compared and no significant difference was observed for FIGO stage, primary treatment and chemotherapy regimen (Table 1). OS did not differ between the two cohorts (p = .15; data not shown). BRCA-testing for EOC has only become standard of care since 2019 and is therefore largely unknown in our cohort and not compared for both centers. Based on the similar characteristics, both hospital cohorts were subsequently analyzed as one group.
Table 1.

Patient characteristics inclusion cohort

 UMCG (N = 191)
Isala (N = 77)
P-value
N%N% 
Mean age at diagnosis6563 
FIGO stage aIIB/IIC94.745.2.89
III14274.35875.3 
IV4020.91418.2 
Unknown00.011.3 
BRCA statusBCRA1/ BRCA2 mutation126.31215.6N/A
No BCRA mutation7438.71215.6 
Unknown105555368.8 
Primary treatmentPDSComplete6168.52058.8.53
Optimal1213.5514.7 
Incomplete1618.072.4 
 Unknown0025.9 
NACTComplete3433.32354.8.01
Optimal3938.2921.4 
Incomplete2928.4921.4 
  Unkown0012.4 
NACT regimeCarboplatin/Paclitaxel9795.14095.2.97
Other/Unknown54.924.8 
AC regimeCarboplatin/Paclitaxel15380.16787.0.35
No chemotherapy136.822.6 
Other/Unknown2513.1810.4 
Disease status aEvidence of disease14274.34963.6.01
No evidence of disease2714.11519.5 
Progressive disease during primary treatment73.71114.3 
Unknown157.922.6 

FIGO: Fédération Internationale de Gynécologie et d’Obstétrique.

PDS: Primary debulking surgery followed by 6 cycles of adjuvant chemotherapy; NACT: 3 cycles of neo-adjuvant chemotherapy. followed by an interval debulking and 3 cycles adjuvant chemotherapy.

Complete: all visible tumor lesions were removed; Optimal: tumor lesion left <1 cm; Incomplete: tumor lesions left >1 cm.

aChi-square p-value excluded “Unknown/missing”.

Patient characteristics inclusion cohort FIGO: Fédération Internationale de Gynécologie et d’Obstétrique. PDS: Primary debulking surgery followed by 6 cycles of adjuvant chemotherapy; NACT: 3 cycles of neo-adjuvant chemotherapy. followed by an interval debulking and 3 cycles adjuvant chemotherapy. Complete: all visible tumor lesions were removed; Optimal: tumor lesion left <1 cm; Incomplete: tumor lesions left >1 cm. aChi-square p-value excluded “Unknown/missing”. Since patients are selected for primary treatment strategy (PDS or NACT) based on tumor burden, tumor location and health status, and therefore not comparable, the effect on OS was assessed independently for both patient groups. Additionally, we corrected for surgical outcome, since this is the main prognostic factor in HGSOC patients. Indeed, survival analysis revealed a significant benefit of the extent of cytoreductive surgery in PDS patients with survival outcomes of 58, 40 and 29 months in patients with a complete debulking versus an optimal or incomplete debulking, respectively (p < .01). Additionally, optimally debulked PDS patients had a significantly better survival than incompletely debulked patients (p < .01). In NACT patients, patients with a complete debulking had a significantly better survival outcome as compared to patients with an optimal or incomplete debulking of 39, 29 and 27 months, respectively (p < .01) (Supplementary Figure 4, Supplementary Table 3).

Patterns of infiltration of the CD8CD103 immune cell subsets

Infiltration of three immune cell subsets was assessed; CD8+CD103− (single CD8), CD8CD103+ (single CD103) and CD8+CD103+ TRM cells (CD8CD103 TRM) in different locations; the epithelium and stromal compartments (Figure 1).[20] Hierarchical clustering revealed that patients were clustered together based on infiltration of the various cell subsets, independent of location (Figure 2(a)). In addition, there was apparent heterogeneity in the degree of single CD8, single CD103 and CD8CD103 TRM infiltration with a subgroup of patient samples infiltrated by single CD8 cells or single CD103 cells, but not CD8CD103 TRM cells. By contrast, most patient samples with a high level of CD8CD103 TRM infiltration were also characterized by a strong infiltrate of CD8 and CD103 single positive cells (Figure 2(a)). Multiple regression analysis revealed no significant association of FIGO stage, treatment strategy, or surgery outcome with any of the clusters or cell subsets (Figure 2(a)). Finally, multiple regression analysis of histopathological markers determined during diagnostic workup (p53, p16, PAX8, WT1 and CK7) revealed no particular association with the CD8CD103 TRM immune clusters (Figure 2(b)).
Figure 2.

Patterns of infiltration of the CD8CD103 immune cell subsets.A, Heatmap displaying infiltration of the CD8CD103 immune cell subsets in the epithelium and stromal compartment. Hierarchical cluster analysis of all samples displayed three main clusters based on immune cell population; CD8+CD103+ (CD8CD103 TRM); CD8-CD103+ (single CD103) and CD8+CD103- (single CD8). For each sample clinical characteristics are displayed including BRCA-status, FIGO-stage, site of tumor material collection, presence of macroscopic disease after surgery and primary treatment strategy. B, Heatmap of the CD8CD103 TRM immune cell cluster determined in figure 1A, displaying the analysis of histopathological markers determined during diagnostic workup including p53, PAX8, WT1 and CK7

Patterns of infiltration of the CD8CD103 immune cell subsets.A, Heatmap displaying infiltration of the CD8CD103 immune cell subsets in the epithelium and stromal compartment. Hierarchical cluster analysis of all samples displayed three main clusters based on immune cell population; CD8+CD103+ (CD8CD103 TRM); CD8-CD103+ (single CD103) and CD8+CD103- (single CD8). For each sample clinical characteristics are displayed including BRCA-status, FIGO-stage, site of tumor material collection, presence of macroscopic disease after surgery and primary treatment strategy. B, Heatmap of the CD8CD103 TRM immune cell cluster determined in figure 1A, displaying the analysis of histopathological markers determined during diagnostic workup including p53, PAX8, WT1 and CK7

Prognostic benefit of stromal and epithelial CD8CD103 TRM infiltration

To determine which immune cell subset contributed to increased survival of the complete HGSOC patient population, we analyzed hazard ratios for all cell subsets in both the epithelial and stromal compartment (Figure 3(a)). Only CD8CD103 TRM in the epithelium were associated with improved survival (HR: 0.87, p = .056 and Figure 3(a,b)). Accordingly, exploratory analysis of survival at an optimal cutoff (top 15%) revealed a clear survival benefit for patients with high tumor epithelial CD8CD103 TRM infiltration (Figure 3(c)). In line with previous publications,[21] we also assessed the survival benefit using the highest tertile for cutoff (Supplementary Table 4), which revealed a survival benefit for patients with tumor epithelial high CD8CD103 TRM infiltration (p = .01, Figure 3(d)).
Figure 3.

Prognostic benefit of stromal and epithelial CD8CD103 TRM infiltration in all patients.A, Forest plot of hazard ratios displaying stromal and epithelial infiltration of the three main CD8CD103 immune cell subsets; single CD8, single CD103 and CD8CD103 TRM. Only, epithelial CD8CD103 TRM infiltration is associated with improved survival. B, Plot showing hazard ratio for overall survival (OS) according to log2 transformed density of intra-epithelial CD8CD103 TRM cells. C, OS was determined in patients with high versus low epithelial CD8CD103 TRM infiltration based on the optimal cut-off (p<0.01). Survival differences were determined by a log-rank test. Numbers at risk are specified in the figure. D, OS was determined in patients with high versus low epithelial CD8CD103 TRM infiltration based on the highest tertile (p=0.01). Survival differences were determined by a log-rank test. Numbers at risk are specified in the figure

Prognostic benefit of stromal and epithelial CD8CD103 TRM infiltration in all patients.A, Forest plot of hazard ratios displaying stromal and epithelial infiltration of the three main CD8CD103 immune cell subsets; single CD8, single CD103 and CD8CD103 TRM. Only, epithelial CD8CD103 TRM infiltration is associated with improved survival. B, Plot showing hazard ratio for overall survival (OS) according to log2 transformed density of intra-epithelial CD8CD103 TRM cells. C, OS was determined in patients with high versus low epithelial CD8CD103 TRM infiltration based on the optimal cut-off (p<0.01). Survival differences were determined by a log-rank test. Numbers at risk are specified in the figure. D, OS was determined in patients with high versus low epithelial CD8CD103 TRM infiltration based on the highest tertile (p=0.01). Survival differences were determined by a log-rank test. Numbers at risk are specified in the figure Next, we explored survival in PDS and NACT patients as independent groups, since these two primary treatment strategies are not directly comparable. We corrected for surgical outcome through comparison of patients with no macroscopic lesions after surgery (complete debulking) and patients with macroscopic tumor lesions after surgery (optimal/incomplete debulking). To allow for sufficient numbers of patients in the subanalysis, we chose the highest tertile as cutoff. In the PDS cohort, patients with no macroscopic tumor lesions after surgery and high CD8CD103 TRM infiltration in the tumor epithelium or stroma were characterized by a significantly longer survival than patients with no macroscopic tumor lesions and low CD8CD103 TRM infiltrate (Figure 4(a), 5-year survival 83% versus 52%; p = .03 and Figure 4(b), 5-year survival 77% versus 54%; p = .01, respectively). In the NACT cohort, there was no effect of CD8CD103 TRM infiltration on OS in patients with and without macroscopic tumor lesions after surgery in stroma or tumor epithelium (Figure 4(c), p = .77 and Figure 4(d), p = .32).
Figure 4.

Prognostic benefit of stromal and epithelial CD8CD103 TRM infiltration in patient subgroups. (A-D), Overall survival (OS) differences were determined by Kaplan Meier analysis. Patients were stratified to high or low CD8CD103 TRM infiltration in the epithelial and stromal compartment using the highest tertile cut-off. Number at risk is specified in the figure. A, High versus low epithelial CD8CD103 TRM infiltration PDS patients with no macroscopic lesions after surgery (p=0.01) and with macroscopic lesions after surgery (p=0.06) B, High versus low stromal CD8CD103 TRM infiltration PDS patients with no macroscopic lesions after surgery (p=0.03) and with macroscopic lesions after surgery (P=0.428) C, High versus low epithelial CD8CD103 TRM infiltration NACT patients with no macroscopic lesions after surgery (p=0.32) and with macroscopic lesions after surgery (p=0.13). D, High versus low stromal CD8CD103 TRM infiltration NACT patients with no macroscopic lesions after surgery (p=0.77) and with macroscopic lesions after surgery (p=0.42)

Prognostic benefit of stromal and epithelial CD8CD103 TRM infiltration in patient subgroups. (A-D), Overall survival (OS) differences were determined by Kaplan Meier analysis. Patients were stratified to high or low CD8CD103 TRM infiltration in the epithelial and stromal compartment using the highest tertile cut-off. Number at risk is specified in the figure. A, High versus low epithelial CD8CD103 TRM infiltration PDS patients with no macroscopic lesions after surgery (p=0.01) and with macroscopic lesions after surgery (p=0.06) B, High versus low stromal CD8CD103 TRM infiltration PDS patients with no macroscopic lesions after surgery (p=0.03) and with macroscopic lesions after surgery (P=0.428) C, High versus low epithelial CD8CD103 TRM infiltration NACT patients with no macroscopic lesions after surgery (p=0.32) and with macroscopic lesions after surgery (p=0.13). D, High versus low stromal CD8CD103 TRM infiltration NACT patients with no macroscopic lesions after surgery (p=0.77) and with macroscopic lesions after surgery (p=0.42)

Prognostic benefit of CD8CD103 TRM cell infiltration in unsegmented tissue

The pipeline used in the current study leverages both tissue segmentation and cell identification using machine learning algorithms. We next evaluated whether analysis of unsegmented tissue would provide comparable prognostic benefit and potentially accelerate future clinical workflows. Hereto, we analyzed survival of patients stratified by single CD8, single CD103 or CD8CD103 TRM in the total patient cohort. Only CD8CD103 TRM was associated with survival benefit when analyzing unsegmented tissue (p = .01) (Figure 5(a)). In addition, neither total CD8 (HR 1.02 [0.92–1.1], p = .76) nor total CD103 (HR 0.92 [0.80–1.1], p = .23) were associated with improved survival. Analysis by log-rank test using either the optimal cutoff or the top tertile confirmed prognostic benefit for highly infiltrated patients (Figure 5(c,d), respectively). Exploratory sub-analysis of CD8CD103 TRM in the individual patient groups again revealed the restriction of prognostic benefit to PDS patients with no macroscopic tumor tissue (Figure 5(e)).
Figure 5.

Prognostic benefit of CD8CD103 TRM cell infiltration in unsegmented tissue.(A-F), Displays analysis of infiltration in unsegmented tissue of the CD8CD103 immune cell subsets. A, Forest plot of hazard ratios displaying infiltration of the three main CD8CD103 immune cell subsets; single CD8, single CD103 and CD8CD103 TRM. Only, CD8CD103 TRM infiltration is associated with improved survival (p=0.014). B,Plot showing hazard ratio for overall survival (OS) according to log2 transformed density of CD8CD103 TRM cells. C, OS was determined in patients with high versus low CD8CD103 TRM infiltration based on the optimal cut-off (p<0.01). Survival differences were determined by a log-rank test. Numbers at risk are specified in the figure. D, OS was determined in patients with high verus low CD8CD103 TRM infiltration in unsegmented tissue based on the highest tertile (p=0.01). Numbers at risk are specified in the figure. (E-F), Survival differences were determined by Kaplan Meier analysis. Patients were stratified to high or low CD8CD103 TRM infiltration in unsegmented tissue using the highest tertile cut-off. Number at risk is specified in the figure. E, High versus low CD8CD103 TRM infiltration PDS patients with no macroscopic lesions after surgery (p=<0.01) and with macroscopic lesions after surgery (p=0.03). F, High versus low CD8CD103 TRM infiltration NACT patients with no macroscopic lesions after surgery (p=0.59) and with macroscopic lesions after surgery (p=0.02)

Prognostic benefit of CD8CD103 TRM cell infiltration in unsegmented tissue.(A-F), Displays analysis of infiltration in unsegmented tissue of the CD8CD103 immune cell subsets. A, Forest plot of hazard ratios displaying infiltration of the three main CD8CD103 immune cell subsets; single CD8, single CD103 and CD8CD103 TRM. Only, CD8CD103 TRM infiltration is associated with improved survival (p=0.014). B,Plot showing hazard ratio for overall survival (OS) according to log2 transformed density of CD8CD103 TRM cells. C, OS was determined in patients with high versus low CD8CD103 TRM infiltration based on the optimal cut-off (p<0.01). Survival differences were determined by a log-rank test. Numbers at risk are specified in the figure. D, OS was determined in patients with high verus low CD8CD103 TRM infiltration in unsegmented tissue based on the highest tertile (p=0.01). Numbers at risk are specified in the figure. (E-F), Survival differences were determined by Kaplan Meier analysis. Patients were stratified to high or low CD8CD103 TRM infiltration in unsegmented tissue using the highest tertile cut-off. Number at risk is specified in the figure. E, High versus low CD8CD103 TRM infiltration PDS patients with no macroscopic lesions after surgery (p=<0.01) and with macroscopic lesions after surgery (p=0.03). F, High versus low CD8CD103 TRM infiltration NACT patients with no macroscopic lesions after surgery (p=0.59) and with macroscopic lesions after surgery (p=0.02)

Discussion

This study applies a digital quantification method,[20] employing deep neural networks for tissue segmentation, to determine the infiltration patterns of single CD8, single CD103 and CD8CD103 TRM in HGSOC, and to investigate the impact of the spatial distribution of immune cells in the tumor microenvironment on clinical outcomes. We demonstrate that high CD8CD103 TRM infiltration is associated with improved survival in HGSOC patients; however, this survival benefit is restricted to completely debulked PDS patients. In line with previously published work, PDS patients with a complete debulking had the longest OS (±58 months), followed by optimally debulked PDS patients and completely debulked NACT patients (both ±40 months).[21,22] Importantly, the ~50% 5-year OS in PDS patients treated between 2008 and 2017 in this study was also comparable to other published data demonstrating a 44–56% 5-year OS in PDS patients treated between 2006 and 2013.[22] In our NACT cohort, time to recurrence and OS were approximately 13 and 31.8 months, which is a slightly inferior outcome than published by Cobb et al., who demonstrated a PFS of 16.4 and an OS of 48.2 months. However, in the recent analysis by Cobb et al., HGSOC patients were not randomly selected as they were matched to the investigated low-grade serous ovarian cancer patients. Hence, approximately two-third of the NACT patients had no tumor lesions post-surgery,[23] whereas in our study only one-third of the NACT patients had a complete interval debulking surgery. In general, EOC is characterized by a relatively low mutational burden and low numbers of TILs compared to, for example, melanoma and lung cancer.[24,25] The present cohort confirms the overall low number of TILs in HGSOC with only 15% of the patients having high CD8CD103 TRM infiltrate, based on the optimal cutoff. Our results on the restricted prognostic benefit of CD8CD103 TRM to completely debulked PDS patients are in line with Zhang et al., who also reported prognostic benefit of TILs related to surgical outcome in ovarian cancer.[26] Why only this small subgroup of patients benefits from high CD8CD103 TRM infiltration remains unclear. Hypothetically, in patients with macroscopic tumor lesions after surgery, the remaining tumor load could exploit immune escape mechanisms, thereby suppressing CD8CD103 TRM activity. In NACT patients, no clear survival benefit was observed for patients with high TRM infiltration in either the stromal or epithelial compartment, which is concordant with our previous work.[21] The absence of prognostic benefit of TILs in NACT patients has been observed in our previous research and could be explained by reduced MHC-I expression resulting in lack of CD8 T cell activation and reduced immunogenicity.[27] Indeed, chemotherapy has been associated with MHC-I down regulation in cancer.[28] As expected, CD8CD103 TRM quantification in the tumor epithelium had the strongest predictive value. However, not only epithelial but also stromal CD8CD103 TRM infiltration was predictive for improved survival. Since analysis of TMA slides provide a two-dimensional assessment of tissue architecture, it cannot be excluded that the stromal CD8CD103 TRM were not still located in close proximity to the tumor epithelium just below or above the cross-section of the assessed TMA-slide. Furthermore, a fraction of the stromal CD8CD103 TRM could also represent ‘bystander’ tissue resident memory T cells (bystander-TRM). Bystander-TRM are tumor-unspecific T cells, residing in lymphoid and non-lymphoid tissues and can contribute to the anti-tumor immune response via the delivery of common adjuvant viral peptides, resulting in the recruitment and accumulation of immune cells such as CD8+ T cells and NK cells.[29] In unsegmented tissue, CD8CD103 TRM were only associated with improved survival in PDS patients with no macroscopic tumor tissue remaining after debulking surgery and seemed equally prognostic compared to assessment of the tumor epithelium compartment alone. Consequently, assessment of CD8CD103 TRM in unsegmented tissue, and not in individual compartments, could potentially accelerate future clinical workflows, increasing clinical applicability. Of note, an inverse correlation was observed in unsegmented tissue of both PDS and NACT patients with macroscopic lesions after surgery; low infiltration had a better survival compared to high infiltration. In the PDS cohort, the group with low infiltration consisted out of 12 optimal and 8 incomplete surgeries compared to three optimal and nine incomplete in the highly infiltrated group, providing an explanation for this unexpected survival difference. In the NACT cohort, only 15 patients were characterized with high infiltration versus 53 patients with low infiltration. Unfortunately, group sizes were too small to independently analyze survival for all surgical outcomes. The results found in this study could potentially be used to improve immune checkpoint inhibition (ICI) treatment response rates and pave the way for personalized treatment. Up to now, ICI has shown limited response rates of only 10–15% in OC.[30] However, these phase II clinical trials were performed in unstratified relapsed or platinum-resistant OC patients.[31,32] Recent studies in the primary setting suggest ICI treatment early-on might be superior compared to ICI after disease recurrence.[33,34] Thus, we would argue for the exploration of ICI maintenance therapy in HGSOC patients, in combination with standard adjuvant chemotherapy. Patients could be further stratified based on TIL infiltration, as it is well-established that ICI is most effective in tumors infiltrated by a high number of TILs.[35-37] Completely debulked PDS patients with high CD8CD103 TRM infiltrated tumors might therefore particularly benefit from ICI maintenance treatment. Whereas patients with complete PDS and low CD8CD103 TRM infiltrated tumors, might benefit more from a combinatorial treatment regimen of anti-tumor vaccination and subsequent ICI. This was recently successfully demonstrated in melanoma patients receiving an antigen-encoding mRNA vaccine, targeting non-mutated tumor-associated antigens, alone or in combination with ICI. Interestingly, response rates were not correlated with tumor associated antigen expression nor mutational burden, supporting the applicability of this combinatorial strategy in tumors with low mutational burden such as OC.[38] Overall, the results provided by this study demonstrate CD8CD103 double staining as a superior tool for prognostication compared to single CD8 or CD103 and advocates the further exploration of image-based quantification of CD8CD103 TRM in HGSOC. We demonstrate that the prognostic benefit of CD8CD103 TRM infiltration in HGSOC is restricted to PDS treated patients with a complete debulking. This approach provides novel insights into prognostic stratification of HGSOC patients and may contribute to personalized treatment strategies in the future. Click here for additional data file. Click here for additional data file.
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Review 1.  Do we see what we think we see? The complexities of morphological assessment.

Authors:  Peter W Hamilton; Paul J van Diest; Richard Williams; Anthony G Gallagher
Journal:  J Pathol       Date:  2009-07       Impact factor: 7.996

Review 2.  Rise of the Machines: Advances in Deep Learning for Cancer Diagnosis.

Authors:  Adrian B Levine; Colin Schlosser; Jasleen Grewal; Robin Coope; Steve J M Jones; Stephen Yip
Journal:  Trends Cancer       Date:  2019-02-28

3.  Pembrolizumab versus ipilimumab for advanced melanoma: final overall survival results of a multicentre, randomised, open-label phase 3 study (KEYNOTE-006).

Authors:  Jacob Schachter; Antoni Ribas; Georgina V Long; Ana Arance; Jean-Jacques Grob; Laurent Mortier; Adil Daud; Matteo S Carlino; Catriona McNeil; Michal Lotem; James Larkin; Paul Lorigan; Bart Neyns; Christian Blank; Teresa M Petrella; Omid Hamid; Honghong Zhou; Scot Ebbinghaus; Nageatte Ibrahim; Caroline Robert
Journal:  Lancet       Date:  2017-08-16       Impact factor: 79.321

4.  Antitumor activity and safety of pembrolizumab in patients with advanced recurrent ovarian cancer: results from the phase II KEYNOTE-100 study.

Authors:  U A Matulonis; R Shapira-Frommer; A D Santin; A S Lisyanskaya; S Pignata; I Vergote; F Raspagliesi; G S Sonke; M Birrer; D M Provencher; J Sehouli; N Colombo; A González-Martín; A Oaknin; P B Ottevanger; V Rudaitis; K Katchar; H Wu; S Keefe; J Ruman; J A Ledermann
Journal:  Ann Oncol       Date:  2019-07-01       Impact factor: 32.976

Review 5.  MHC class I antigens, immune surveillance, and tumor immune escape.

Authors:  Angel Garcia-Lora; Ignacio Algarra; Federico Garrido
Journal:  J Cell Physiol       Date:  2003-06       Impact factor: 6.384

6.  Treatment Regimen, Surgical Outcome, and T-cell Differentiation Influence Prognostic Benefit of Tumor-Infiltrating Lymphocytes in High-Grade Serous Ovarian Cancer.

Authors:  Maartje C A Wouters; Fenne L Komdeur; Hagma H Workel; Harry G Klip; Annechien Plat; Neeltje M Kooi; G Bea A Wisman; Marian J E Mourits; Henriette J G Arts; Maaike H M Oonk; Refika Yigit; Steven de Jong; Cornelis J M Melief; Harry Hollema; Evelien W Duiker; Toos Daemen; Marco de Bruyn; Hans W Nijman
Journal:  Clin Cancer Res       Date:  2015-09-18       Impact factor: 12.531

7.  Intratumoral T cells, recurrence, and survival in epithelial ovarian cancer.

Authors:  Lin Zhang; Jose R Conejo-Garcia; Dionyssios Katsaros; Phyllis A Gimotty; Marco Massobrio; Giorgia Regnani; Antonis Makrigiannakis; Heidi Gray; Katia Schlienger; Michael N Liebman; Stephen C Rubin; George Coukos
Journal:  N Engl J Med       Date:  2003-01-16       Impact factor: 91.245

8.  Prognostic significance of CD103+ immune cells in solid tumor: a systemic review and meta-analysis.

Authors:  Younghoon Kim; Yunjoo Shin; Gyeong Hoon Kang
Journal:  Sci Rep       Date:  2019-03-07       Impact factor: 4.379

9.  Signatures of mutational processes in human cancer.

Authors:  Ludmil B Alexandrov; Serena Nik-Zainal; David C Wedge; Samuel A J R Aparicio; Sam Behjati; Andrew V Biankin; Graham R Bignell; Niccolò Bolli; Ake Borg; Anne-Lise Børresen-Dale; Sandrine Boyault; Birgit Burkhardt; Adam P Butler; Carlos Caldas; Helen R Davies; Christine Desmedt; Roland Eils; Jórunn Erla Eyfjörd; John A Foekens; Mel Greaves; Fumie Hosoda; Barbara Hutter; Tomislav Ilicic; Sandrine Imbeaud; Marcin Imielinski; Marcin Imielinsk; Natalie Jäger; David T W Jones; David Jones; Stian Knappskog; Marcel Kool; Sunil R Lakhani; Carlos López-Otín; Sancha Martin; Nikhil C Munshi; Hiromi Nakamura; Paul A Northcott; Marina Pajic; Elli Papaemmanuil; Angelo Paradiso; John V Pearson; Xose S Puente; Keiran Raine; Manasa Ramakrishna; Andrea L Richardson; Julia Richter; Philip Rosenstiel; Matthias Schlesner; Ton N Schumacher; Paul N Span; Jon W Teague; Yasushi Totoki; Andrew N J Tutt; Rafael Valdés-Mas; Marit M van Buuren; Laura van 't Veer; Anne Vincent-Salomon; Nicola Waddell; Lucy R Yates; Jessica Zucman-Rossi; P Andrew Futreal; Ultan McDermott; Peter Lichter; Matthew Meyerson; Sean M Grimmond; Reiner Siebert; Elías Campo; Tatsuhiro Shibata; Stefan M Pfister; Peter J Campbell; Michael R Stratton
Journal:  Nature       Date:  2013-08-14       Impact factor: 49.962

10.  Low Mutation Burden in Ovarian Cancer May Limit the Utility of Neoantigen-Targeted Vaccines.

Authors:  Spencer D Martin; Scott D Brown; Darin A Wick; Julie S Nielsen; David R Kroeger; Kwame Twumasi-Boateng; Robert A Holt; Brad H Nelson
Journal:  PLoS One       Date:  2016-05-18       Impact factor: 3.240

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  1 in total

1.  Synergistic antitumor response with recombinant modified virus Ankara armed with CD40L and CD137L against peritoneal carcinomatosis.

Authors:  Ángela Bella; Leire Arrizabalaga; Claudia Augusta Di Trani; Assunta Cirella; Myriam Fernandez-Sendin; Celia Gomar; Joan Salvador Russo-Cabrera; Inmaculada Rodríguez; José González-Gomariz; Maite Alvarez; Álvaro Teijeira; José Medina-Echeverz; Maria Hinterberger; Hubertus Hochrein; Ignacio Melero; Pedro Berraondo; Fernando Aranda
Journal:  Oncoimmunology       Date:  2022-07-13       Impact factor: 7.723

  1 in total

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