Literature DB >> 34112090

Integrated proteomic and transcriptomic profiling identifies aberrant gene and protein expression in the sarcomere, mitochondrial complex I, and the extracellular matrix in Warmblood horses with myofibrillar myopathy.

Zoë J Williams1, Deborah Velez-Irizarry2, Keri Gardner2, Stephanie J Valberg2.   

Abstract

BACKGROUND: Myofibrillar myopathy in humans causes protein aggregation, degeneration, and weakness of skeletal muscle. In horses, myofibrillar myopathy is a late-onset disease of unknown origin characterized by poor performance, atrophy, myofibrillar disarray, and desmin aggregation in skeletal muscle. This study evaluated molecular and ultrastructural signatures of myofibrillar myopathy in Warmblood horses through gluteal muscle tandem-mass-tag quantitative proteomics (5 affected, 4 control), mRNA-sequencing (8 affected, 8 control), amalgamated gene ontology analyses, and immunofluorescent and electron microscopy.
RESULTS: We identified 93/1533 proteins and 47/27,690 genes that were significantly differentially expressed. The top significantly differentially expressed protein CSRP3 and three other differentially expressed proteins, including, PDLIM3, SYNPO2, and SYNPOL2, are integrally involved in Z-disc signaling, gene transcription and subsequently sarcomere integrity. Through immunofluorescent staining, both desmin aggregates and CSRP3 were localized to type 2A fibers. The highest differentially expressed gene CHAC1, whose protein product degrades glutathione, is associated with oxidative stress and apoptosis. Amalgamated transcriptomic and proteomic gene ontology analyses identified 3 enriched cellular locations; the sarcomere (Z-disc & I-band), mitochondrial complex I and the extracellular matrix which corresponded to ultrastructural Z-disc disruption and mitochondrial cristae alterations found with electron microscopy.
CONCLUSIONS: A combined proteomic and transcriptomic analysis highlighted three enriched cellular locations that correspond with MFM ultrastructural pathology in Warmblood horses. Aberrant Z-disc mechano-signaling, impaired Z-disc stability, decreased mitochondrial complex I expression, and a pro-oxidative cellular environment are hypothesized to contribute to the development of myofibrillar myopathy in Warmblood horses. These molecular signatures may provide further insight into diagnostic biomarkers, treatments, and the underlying pathophysiology of MFM.

Entities:  

Keywords:  Gluteal muscle; Myofibrillar myopathy; Proteomics; Transcriptomics; Warmblood; Z-disc

Year:  2021        PMID: 34112090     DOI: 10.1186/s12864-021-07758-0

Source DB:  PubMed          Journal:  BMC Genomics        ISSN: 1471-2164            Impact factor:   3.969


  90 in total

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Authors:  Rolf Schröder; Benedikt Schoser
Journal:  Brain Pathol       Date:  2009-07       Impact factor: 6.508

2.  Missense mutations in desmin associated with familial cardiac and skeletal myopathy.

Authors:  L G Goldfarb; K Y Park; L Cervenáková; S Gorokhova; H S Lee; O Vasconcelos; J W Nagle; C Semino-Mora; K Sivakumar; M C Dalakas
Journal:  Nat Genet       Date:  1998-08       Impact factor: 38.330

3.  Myofibrillar myopathy: clinical, morphological and genetic studies in 63 patients.

Authors:  Duygu Selcen; Kinji Ohno; Andrew G Engel
Journal:  Brain       Date:  2004-01-07       Impact factor: 13.501

4.  Suspected myofibrillar myopathy in Arabian horses with a history of exertional rhabdomyolysis.

Authors:  S J Valberg; E C McKenzie; L V Eyrich; J Shivers; N E Barnes; C J Finno
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Review 5.  Myofibrillar myopathy in the genomic context.

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Journal:  J Appl Genet       Date:  2018-09-10       Impact factor: 3.240

6.  Clinical and histopathological features of myofibrillar myopathy in Warmblood horses.

Authors:  S J Valberg; A M Nicholson; S S Lewis; R A Reardon; C J Finno
Journal:  Equine Vet J       Date:  2017-06-26       Impact factor: 2.888

7.  A knock-in/knock-out mouse model of HSPB8-associated distal hereditary motor neuropathy and myopathy reveals toxic gain-of-function of mutant Hspb8.

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Journal:  Acta Neuropathol       Date:  2017-08-05       Impact factor: 17.088

Review 8.  Myofibrillar Myopathies: New Perspectives from Animal Models to Potential Therapeutic Approaches.

Authors:  Sabrina Batonnet-Pichon; Anthony Behin; Eva Cabet; Florence Delort; Patrick Vicart; Alain Lilienbaum
Journal:  J Neuromuscul Dis       Date:  2017

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Journal:  Acta Neuropathol       Date:  2012-08-03       Impact factor: 17.088

10.  Muscle glycogen concentrations and response to diet and exercise regimes in Warmblood horses with type 2 Polysaccharide Storage Myopathy.

Authors:  Zoë J Williams; Megan Bertels; Stephanie J Valberg
Journal:  PLoS One       Date:  2018-09-05       Impact factor: 3.240

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