| Literature DB >> 34104963 |
Andrew Thompson1,2,3, Katharine King1,2,4, Andrew P Morris5,6, Munir Pirmohamed1,2,3,7,8.
Abstract
The relationship between the genetic loci that influence mean corpuscular volume (MCV) and those associated with excess alcohol drinking is unknown. We used white British participants from the UK Biobank (n = 362 595) to assess the association between alcohol consumption and MCV, and whether this was modulated by genetic factors. Multivariable regression was applied to identify predictors of MCV. GWAS, with and without stratification for alcohol consumption, determined how genetic variants influence MCV. SNPs in ADH1B, ADH1C and ALDH1B were used to construct a genetic score to test the assumption that acetaldehyde formation is an important determinant of MCV. Additional investigations using Mendelian randomization and phenome-wide association analysis were conducted. Increasing alcohol consumption by 40 g/week resulted in a 0.30% [95% confidence interval CI: 0.30-0.31%] increase in MCV (P < 1.0 × 10-320). Unstratified (irrespective of alcohol intake) GWAS identified 212 loci associated with MCV, of which 108 were novel. There was no heterogeneity of allelic effects by drinking status. No association was found between MCV and the genetic score generated from alcohol metabolizing genes. Mendelian randomization demonstrated a causal effect for alcohol on MCV. Seventy-one SNP-outcome pairs reached statistical significance in phenome-wide association analysis, with evidence of shared genetic architecture for MCV and thyroid dysfunction, and mineral metabolism disorders. MCV increases linearly with alcohol intake in a causal manner. Many genetic loci influence MCV, with new loci identified in this analysis that provide novel biological insights. However, there was no interaction between alcohol consumption and the allelic variants associated with MCV.Entities:
Mesh:
Year: 2021 PMID: 34104963 PMCID: PMC8522631 DOI: 10.1093/hmg/ddab147
Source DB: PubMed Journal: Hum Mol Genet ISSN: 0964-6906 Impact factor: 6.150
Summary of linear and logistic regression models with all participants (n = 362 595)
| Risk factor | Change in MCV (%) | 95% CI |
| |
|---|---|---|---|---|
| Alcohol: continuous variable | ||||
| Alcohol (5 units) | 0.30 | 0.30 to 0.31 | <1.0 × 10−320 | |
| Sex (Ref: female) | −0.21 | −0.25 to −0.18 | 5.2 × 10−38 | |
| Age at recruitment | 0.06 | 0.06 to 0.06 | <1.0 × 10−320 | |
| Never smoker (Ref: current) | −2.00 | −2.05 to −1.95 | <1.0 × 10−320 | |
| Previous smoker (Ref: current) | −1.87 | −1.93 to −1.82 | <1.0 × 10−320 | |
| Hypothyroidism | −0.20 | −0.28 to −0.13 | 2.4 × 10−7 | |
| B12 deficiency | 0.20 | −0.13 to 0.53 | 0.23 | |
| Alcohol: categorical variable | ||||
| Drinking status (Ref: light) | −0.89 | −0.93 to −0.85 | < 1.0 × 10−320 | |
| Sex (Ref: female) | −0.08 | −0.11 to −0.05 | 1.9 × 10−6 | |
| Age at recruitment | 0.06 | 0.06 to 0.07 | <1.0 × 10−320 | |
| Never smoker (Ref: current) | −2.11 | −2.16 to −2.06 | <1.0 × 10−320 | |
| Previous smoker (Ref: current) | −1.97 | −2.02 to −1.92 | <1.0 × 10−320 | |
| Hypothyroidism | −0.17 | −0.25 to −0.09 | 1.4 × 10−5 | |
| B12 deficiency | 0.26 | −0.06 to 0.59 | 0.12 |
Figure 2
Relationship between minor allele frequency and effect size.
Summary of genome-wide significant SNPs following distance-based clumping
| SNP | CHR | BP | Locus (overlapping/nearest) | Effect allele | EAF | % change MCV | 95%LCI | %UCI |
| Unique |
|---|---|---|---|---|---|---|---|---|---|---|
| rs7775698 | 6 | 135 418 635 | HBS1L | C | 0.738 | --0.73 | --0.76 | --0.71 | 2.8e−790 | N |
| rs144861591 | 6 | 26 072 992 | HFE | C | 0.924 | --1.10 | --1.14 | --1.06 | 3.4e−640 | N |
| rs855791 | 22 | 37 462 936 | TMPRSS6 | A | 0.440 | --0.59 | --0.61 | --0.56 | 3.0e−610 | N |
| rs9471708 | 6 | 41 956 353 | CCND3 | C | 0.728 | 0.58 | 0.56 | 0.60 | 1.3e−493 | N |
| rs592423 | 6 | 139 840 693 | RP11-12A2.3 | A | 0.447 | 0.42 | 0.40 | 0.44 | 2.2e−327 | N |
| rs149359690 | 6 | 25 526 319 | LRRC16A | C | 0.900 | --0.69 | --0.72 | --0.65 | 3.6e−325 | N |
| rs218264 | 4 | 55 408 875 | AC006552.1 | A | 0.752 | --0.46 | --0.49 | --0.44 | 8.7E−287 | Y |
| rs13191659 | 6 | 27 001 055 | VN1R12P | C | 0.911 | --0.66 | --0.70 | --0.63 | 1.7E−264 | Y |
| rs140522 | 22 | 50 971 266 | ODF3B | T | 0.327 | --0.37 | --0.39 | --0.35 | 1.4E−221 | N |
| rs9487023 | 6 | 109 590 004 | C6orf183 | A | 0.551 | --0.34 | --0.36 | --0.31 | 3.6E−212 | N |
| rs71559031 | 6 | 27 519 947 | XXbac-BPG34I8.3 | G | 0.916 | --0.62 | --0.66 | --0.58 | 2.7E−203 | Y |
| rs117747069 | 16 | 170 076 | NPRL3 | G | 0.963 | 1.03 | 0.96 | 1.10 | 9.1E−188 | N |
| rs10758657 | 9 | 4 853 751 | RCL1 | A | 0.791 | 0.39 | 0.37 | 0.42 | 1.8E−182 | N |
| rs6014993 | 20 | 55 991 637 | RBM38 | A | 0.513 | --0.32 | --0.34 | --0.30 | 1.2E−180 | N |
| rs147493146 | 6 | 28 054 465 | ZNF165 | C | 0.913 | --0.56 | --0.60 | --0.52 | 5.2E−179 | Y |
| rs9801017 | 7 | 100 236 202 | TFR2 | G | 0.376 | --0.31 | --0.34 | --0.29 | 5.7E−168 | N |
| rs7428496 | 3 | 142 320 532 | PLS1 | A | 0.414 | 0.30 | 0.28 | 0.33 | 7.4E−164 | N |
| rs6592965 | 7 | 50 427 982 | IKZF1 | G | 0.546 | --0.30 | --0.32 | --0.28 | 1.3E−158 | N |
| rs8110787 | 19 | 12 999 458 | KLF1 | C | 0.609 | --0.29 | --0.31 | --0.27 | 3.2E−149 | N |
| rs114179634 | 6 | 28 626 101 | LINC00533 | C | 0.911 | --0.51 | --0.55 | --0.47 | 2.3E−146 | Y |
| rs13194984 | 6 | 26 500 563 | BTN1A1 | G | 0.856 | --0.38 | --0.41 | --0.35 | 1.7E−134 | N |
| rs41298087 | 3 | 195 779 736 | TFRC | C | 0.687 | 0.29 | 0.27 | 0.32 | 4.0E−134 | N |
| rs1045267 | 2 | 112 187 041 | NA | A | 0.266 | 0.32 | 0.29 | 0.35 | 2.8E−122 | N |
| rs9952469 | 18 | 43 812 010 | C18orf25 | T | 0.254 | 0.30 | 0.27 | 0.32 | 9.1E−121 | N |
| rs362538 | 6 | 29 510 630 | GPR53P | G | 0.902 | --0.40 | --0.44 | --0.36 | 2.4E−109 | Y |
| rs113700287 | 3 | 24 334 511 | THRB | T | 0.326 | --0.26 | --0.28 | --0.24 | 1.1E−107 | N |
| rs78744187 | 19 | 33 754 548 | CTD-2540B15.12 | C | 0.918 | 0.44 | 0.40 | 0.48 | 7.7E−107 | N |
| rs113968785 | 15 | 65 734 015 | DPP8 | A | 0.748 | 0.28 | 0.25 | 0.30 | 4.3E−101 | Y |
| rs243076 | 2 | 60 617 563 | AC007381.2 | G | 0.594 | --0.23 | --0.25 | --0.21 | 1.9E−94 | Y |
| rs17476364 | 10 | 71 094 504 | HK1 | T | 0.890 | --0.36 | --0.39 | --0.32 | 1.5E−92 | N |
| rs2057726 | 6 | 30 335 350 | UBQLN1P1 | C | 0.143 | 0.31 | 0.28 | 0.34 | 1.5E−91 | Y |
| rs56273049 | 12 | 121 156 041 | UNC119B | A | 0.612 | 0.23 | 0.21 | 0.25 | 4.3E−90 | N |
| rs7089063 | 10 | 45 946 389 | RP11-67C2.2 | C | 0.761 | --0.26 | --0.28 | --0.23 | 8.0E−88 | Y |
| rs738264 | 22 | 32 874 258 | FBXO7 | G | 0.728 | 0.24 | 0.22 | 0.27 | 1.7E−85 | N |
| rs536350318 | 12 | 4 331 068 | CCND2-AS1 | C | 0.788 | --0.26 | --0.28 | --0.23 | 1.1E−81 | N |
| rs3811444 | 1 | 248 039 451 | TRIM58 | C | 0.667 | 0.22 | 0.20 | 0.24 | 1.1E−81 | N |
| rs2026428 | 10 | 45 389 452 | TMEM72-AS1 | T | 0.416 | --0.21 | --0.23 | --0.19 | 3.3E−75 | N |
| rs16843346 | 1 | 198 543 027 | RP11-553K8.2 | C | 0.972 | --0.57 | --0.64 | --0.51 | 1.7E−66 | Y |
| rs1042391 | 6 | 16 290 761 | GMPR | T | 0.619 | 0.19 | 0.17 | 0.21 | 9.5E−66 | N |
| rs56142708 | 17 | 19 934 963 | SPECC1 | A | 0.478 | --0.19 | --0.21 | --0.17 | 2.8E−65 | N |
| rs12193223 | 6 | 24 978 511 | FAM65B | C | 0.938 | --0.37 | --0.42 | --0.33 | 1.3E−62 | Y |
| rs17296501 | 8 | 21 849 566 | XPO7 | C | 0.838 | --0.24 | --0.27 | --0.21 | 8.1E−59 | N |
| rs7705526 | 5 | 1 285 974 | TERT | C | 0.674 | 0.19 | 0.17 | 0.21 | 1.6E−57 | N |
| rs10901252 | 9 | 136 128 000 | ABO | G | 0.940 | 0.36 | 0.32 | 0.41 | 2.5E−55 | N |
| rs74401481 | 19 | 1 855 583 | KLF16 | C | 0.975 | 0.66 | 0.57 | 0.74 | 3.5E−55 | N |
| rs13207150 | 6 | 110 092 900 | FIG4 | C | 0.313 | --0.18 | --0.20 | --0.15 | 1.2E−52 | N |
| rs4134058 | 1 | 47 670 911 | TAL1 | T | 0.457 | --0.17 | --0.19 | --0.15 | 5.4E−52 | N |
| rs2834256 | 21 | 35 125 373 | AP000304.12 | A | 0.655 | 0.18 | 0.15 | 0.20 | 1.4E−51 | N |
| rs381500 | 6 | 164 478 388 | RP1-155D22.2 | C | 0.549 | 0.16 | 0.14 | 0.18 | 2.5E−50 | N |
| rs1172113 | 1 | 205 226 288 | TMCC2 | T | 0.587 | --0.16 | --0.19 | --0.14 | 3.0E−49 | N |
| rs12128171 | 1 | 158 580 477 | SPTA1 | A | 0.719 | 0.18 | 0.15 | 0.20 | 3.3E−48 | N |
| rs6730558 | 2 | 8 756 183 | AC011747.6 | C | 0.620 | 0.16 | 0.14 | 0.18 | 9.6E−46 | N |
| rs111918234 | 5 | 154 027 482 | MIR1303 | GT | 0.860 | --0.23 | --0.26 | --0.19 | 3.1E−45 | N |
| rs558567978 | 17 | 76 124 810 | TMC6 | A | 0.777 | 0.19 | 0.16 | 0.21 | 6.8E−44 | N |
| rs67775544 | 4 | 122 796 917 | RP11-63B13.1 | G | 0.603 | --0.16 | --0.18 | --0.13 | 8.4E−44 | Y |
| rs17534202 | 1 | 203 281 175 | BTG2 | G | 0.464 | 0.15 | 0.13 | 0.17 | 5.9E−42 | N |
| rs111721712 | 6 | 31 315 407 | HLA-B | C | 0.534 | 0.15 | 0.13 | 0.17 | 8.5E−42 | N |
| rs10766533 | 11 | 19 224 677 | CSRP3 | T | 0.278 | 0.16 | 0.14 | 0.19 | 1.7E−40 | N |
| rs11227793 | 11 | 67 194 593 | RPS6KB2 | C | 0.561 | 0.15 | 0.12 | 0.17 | 3.4E−39 | Y |
| rs67971539 | 16 | 87 886 726 | SLC7A5 | T | 0.764 | --0.17 | --0.19 | --0.14 | 8.6E−39 | N |
| rs4134898 | 7 | 99 711 614 | TAF6 | C | 0.868 | 0.21 | 0.18 | 0.24 | 1.7E−37 | Y |
| rs17776547 | 10 | 51 581 143 | NCOA4 | A | 0.965 | --0.38 | --0.44 | --0.32 | 4.3E−36 | N |
| rs1567668 | 8 | 23 418 122 | SLC25A37 | A | 0.429 | --0.14 | --0.16 | --0.12 | 1.6E−35 | N |
| rs144894688 | 9 | 100 746 855 | ANP32B | G | 0.780 | 0.16 | 0.13 | 0.19 | 1.6E−33 | N |
| rs35979828 | 12 | 54 685 880 | RP11-968A15.8 | C | 0.931 | --0.26 | --0.30 | --0.22 | 1.8E−32 | N |
| rs114165892 | 14 | 74 223 968 | ELMSAN1 | C | 0.976 | --0.43 | --0.50 | --0.36 | 6.1E−32 | Y |
| rs7789162 | 7 | 44 872 900 | H2AFV | T | 0.495 | --0.13 | --0.15 | --0.11 | 1.5E−31 | N |
| rs145946844 | 2 | 111 612 050 | ACOXL | T | 0.662 | --0.13 | --0.16 | --0.11 | 7.1E−31 | N |
| rs59027521 | 8 | 128 966 573 | PVT1 | A | 0.657 | 0.13 | 0.11 | 0.16 | 2.4E−30 | N |
| rs6440006 | 3 | 141 142 691 | ZBTB38 | G | 0.552 | 0.13 | 0.11 | 0.15 | 3.0E−30 | Y |
| rs6788010 | 3 | 16 929 109 | PLCL2 | T | 0.920 | 0.23 | 0.19 | 0.27 | 9.1E−30 | N |
| rs496321 | 11 | 94 886 632 | RP11-712B9.2 | T | 0.386 | 0.13 | 0.10 | 0.15 | 1.3E−28 | N |
| rs1991866 | 8 | 130 624 105 | CCDC26 | G | 0.424 | 0.12 | 0.10 | 0.15 | 1.7E−28 | N |
| rs592229 | 6 | 31 930 441 | SKIV2L | G | 0.486 | 0.12 | 0.10 | 0.14 | 1.9E−28 | Y |
| rs10883359 | 10 | 101 274 033 | RP11-129J12.2 | A | 0.716 | --0.13 | --0.16 | --0.11 | 5.0E−27 | Y |
| rs10923397 | 1 | 118 251 143 | RP11-134N8.2 | C | 0.837 | --0.16 | --0.19 | --0.13 | 1.1E−26 | N |
| rs78147199 | 15 | 66 245 962 | MEGF11 | G | 0.955 | 0.29 | 0.23 | 0.34 | 1.2E−26 | Y |
| rs12582170 | 12 | 53 757 831 | SP1 | A | 0.156 | --0.16 | --0.19 | --0.13 | 1.4E−26 | N |
| rs2713936 | 15 | 56 545 985 | TEX9 | A | 0.577 | 0.12 | 0.10 | 0.14 | 3.8E−26 | N |
| rs11723371 | 4 | 145 025 810 | RP11-673E1.4 | T | 0.527 | --0.12 | --0.14 | --0.10 | 4.3E−26 | N |
| rs151305716 | 20 | 52 222 106 | ZNF217 | C | 0.984 | --0.48 | --0.57 | --0.39 | 4.9E−26 | N |
| rs111836360 | 16 | 89 786 649 | VPS9D1 | A | 0.594 | --0.12 | --0.14 | --0.09 | 4.7E−25 | N |
| rs2277339 | 12 | 57 146 069 | PRIM1 | T | 0.897 | --0.19 | --0.22 | --0.15 | 6.6E−25 | N |
| rs4900538 | 14 | 102 994 065 | MIR4309 | T | 0.355 | --0.12 | --0.14 | --0.10 | 9.0E−25 | N |
| rs1134634 | 4 | 15 603 069 | CC2D2A | G | 0.414 | --0.11 | --0.14 | --0.09 | 1.9E−24 | N |
| rs136211 | 22 | 36 758 547 | MYH9 | A | 0.313 | 0.12 | 0.10 | 0.14 | 3.9E−24 | N |
| rs371182872 | 11 | 108 300 854 | C11orf65 | CT | 0.588 | 0.11 | 0.09 | 0.14 | 7.7E−24 | N |
| rs322918 | 1 | 199 068 614 | RP11-16L9.4 | A | 0.539 | 0.11 | 0.09 | 0.13 | 8.0E−23 | N |
| rs1569419 | 1 | 2 996 602 | PRDM16 | T | 0.233 | 0.13 | 0.10 | 0.15 | 4.2E−22 | N |
| rs9532563 | 13 | 41 160 270 | FOXO1 | T | 0.782 | 0.13 | 0.10 | 0.16 | 4.8E−22 | N |
| rs200234036 | 1 | 39 869 512 | MACF1 | GC | 0.728 | 0.12 | 0.10 | 0.15 | 7.1E−22 | Y |
| rs875742 | 5 | 173 287 763 | CPEB4 | G | 0.594 | 0.11 | 0.09 | 0.13 | 7.3E−22 | N |
| rs9370792 | 6 | 15 099 585 | RP1-190J20.2 | A | 0.601 | --0.11 | --0.13 | --0.08 | 1.1E−21 | Y |
| rs138191091 | 7 | 99 105 676 | ZKSCAN5 | A | 0.877 | 0.17 | 0.13 | 0.20 | 1.3E−21 | Y |
| rs4955426 | 3 | 49 143 438 | QARS | C | 0.222 | 0.12 | 0.10 | 0.15 | 4.2E−21 | Y |
| rs2143583 | 1 | 114 989 211 | TRIM33 | T | 0.747 | --0.12 | --0.14 | --0.09 | 4.2E−21 | N |
| rs10883710 | 10 | 103 885 557 | LDB1 | T | 0.545 | --0.10 | --0.13 | --0.08 | 5.9E−21 | Y |
| rs7487314 | 12 | 88 836 215 | Y_RNA | G | 0.299 | --0.11 | --0.14 | --0.09 | 6.0E−21 | N |
| rs35362007 | 14 | 96 003 198 | GLRX5 | G | 0.749 | --0.12 | --0.15 | --0.10 | 7.8E−21 | N |
| rs632959 | 1 | 68 197 671 | GNG12 | A | 0.295 | --0.11 | --0.14 | --0.09 | 9.2E−21 | N |
| rs1047891 | 2 | 211 540 507 | CPS1 | C | 0.684 | --0.11 | --0.13 | --0.09 | 1.1E−20 | N |
| rs2923403 | 8 | 42 447 748 | RP11-503E24.3 | G | 0.407 | 0.10 | 0.08 | 0.13 | 2.2E−20 | Y |
| rs2224539 | 20 | 38 552 107 | HSPE1P1 | A | 0.584 | --0.10 | --0.13 | --0.08 | 3.5E−20 | N |
| rs149472343 | 10 | 64 905 218 | NRBF2 | C | 0.967 | 0.28 | 0.22 | 0.34 | 1.3E−19 | N |
| rs2237572 | 7 | 92 260 260 | CDK6 | T | 0.804 | --0.12 | --0.15 | --0.10 | 2.9E−19 | N |
| rs545709142 | 1 | 11 881 141 | CLCN6 | C | 0.837 | 0.13 | 0.10 | 0.16 | 3.3E−19 | N |
| rs12779263 | 10 | 104 886 533 | NT5C2 | G | 0.706 | 0.11 | 0.08 | 0.13 | 3.6E−19 | Y |
| rs322351 | 5 | 172 194 873 | RP11-779O18.3 | C | 0.532 | --0.10 | --0.12 | --0.08 | 4.5E−19 | Y |
| rs72766638 | 9 | 136 931 778 | BRD3 | C | 0.836 | --0.13 | --0.16 | --0.10 | 6.1E−19 | Y |
| rs174567 | 11 | 61 593 005 | FADS2 | A | 0.649 | 0.10 | 0.08 | 0.12 | 8.3E−19 | Y |
| rs4663199 | 2 | 236 368 039 | AGAP1 | T | 0.601 | --0.10 | --0.12 | --0.08 | 1.7E−18 | N |
| rs74929147 | 19 | 18 413 061 | LSM4 | G | 0.941 | 0.21 | 0.16 | 0.26 | 2.2E−18 | N |
| rs201581170 | 10 | 105 682 344 | OBFC1 | T | 0.845 | 0.13 | 0.10 | 0.16 | 3.2E−18 | Y |
| rs9866749 | 3 | 49 650 935 | BSN | A | 0.296 | 0.11 | 0.08 | 0.13 | 4.7E−18 | Y |
| rs2492301 | 1 | 37 939 173 | LINC01137 | T | 0.471 | 0.10 | 0.07 | 0.12 | 6.0E−18 | N |
| rs80226431 | 8 | 48 267 917 | SPIDR | A | 0.905 | 0.16 | 0.12 | 0.20 | 2.0E−17 | Y |
| rs36225153 | 4 | 146 081 852 | OTUD4 | C | 0.886 | 0.15 | 0.11 | 0.18 | 2.8E−17 | Y |
| rs7641761 | 3 | 178 740 422 | ZMAT3 | T | 0.302 | --0.10 | --0.12 | --0.08 | 3.1E−17 | N |
| rs6116019 | 20 | 3 742 066 | C20orf27 | T | 0.901 | --0.16 | --0.19 | --0.12 | 3.7E−17 | N |
| rs4936291 | 11 | 114 009 982 | ZBTB16 | A | 0.611 | 0.10 | 0.07 | 0.12 | 4.0E−17 | Y |
| rs6531706 | 4 | 39 296 167 | RFC1 | T | 0.565 | --0.09 | --0.12 | --0.07 | 5.8E−17 | N |
| rs73079476 | 12 | 21 343 833 | SLCO1B1 | A | 0.850 | 0.13 | 0.10 | 0.16 | 6.1E−17 | Y |
| rs79953286 | 3 | 132 226 100 | DNAJC13 | A | 0.942 | 0.20 | 0.15 | 0.24 | 8.3E−17 | Y |
| rs1867146 | 15 | 75 354 971 | PPCDC | C | 0.818 | 0.12 | 0.09 | 0.15 | 9.0E−17 | Y |
| rs2723513 | 7 | 17 814 888 | SNX13 | A | 0.461 | --0.09 | --0.11 | --0.07 | 1.2E−16 | Y |
| rs1119279 | 8 | 47 071 977 | AC113134.1 | C | 0.903 | 0.15 | 0.12 | 0.19 | 1.9E−16 | Y |
| rs145498761 | 4 | 128 456 129 | RP11-18O11.2 | T | 0.991 | 0.49 | 0.37 | 0.61 | 3.7E−16 | Y |
| rs920112 | 2 | 174 219 135 | AC092573.2 | G | 0.947 | --0.20 | --0.25 | --0.15 | 4.7E−16 | N |
| rs2134814 | 6 | 90 987 512 | BACH2 | C | 0.646 | --0.09 | --0.11 | --0.07 | 5.4E−16 | N |
| rs12196049 | 6 | 121 786 091 | RNU4-35P | A | 0.801 | 0.11 | 0.08 | 0.14 | 6.7E−16 | Y |
| rs964184 | 11 | 116 648 917 | ZNF259 | G | 0.132 | --0.13 | --0.16 | --0.10 | 6.7E−16 | Y |
| rs13209786 | 6 | 131 421 040 | AKAP7 | A | 0.769 | 0.10 | 0.08 | 0.13 | 8.0E−16 | Y |
| rs145185045 | 17 | 60 091 881 | MED13 | T | 0.770 | 0.11 | 0.08 | 0.13 | 1.4E−15 | Y |
| rs3892355 | 19 | 5 696 962 | LONP1 | G | 0.674 | --0.09 | --0.12 | --0.07 | 1.9E−15 | Y |
| rs61952071 | 12 | 133 076 439 | FBRSL1 | C | 0.687 | --0.09 | --0.12 | --0.07 | 2.0E−15 | Y |
| rs6711700 | 2 | 86 987 987 | RMND5A | G | 0.329 | --0.09 | --0.12 | --0.07 | 2.2E−15 | N |
| rs147707926 | 9 | 115 914 583 | SLC31A2 | C | 0.981 | 0.34 | 0.25 | 0.42 | 2.6E−15 | Y |
| rs4672497 | 2 | 62 523 565 | snoU13 | C | 0.779 | 0.10 | 0.08 | 0.13 | 5.0E−15 | N |
| rs657036 | 6 | 35 901 151 | SLC26A8 | G | 0.703 | 0.09 | 0.07 | 0.12 | 5.0E−15 | Y |
| rs7137095 | 12 | 6 739 907 | LPAR5 | C | 0.452 | --0.09 | --0.11 | --0.07 | 8.3E−15 | Y |
| rs1330826 | 9 | 85 129 970 | RP11-15B24.5 | G | 0.772 | --0.10 | --0.13 | --0.08 | 1.2E−14 | N |
| rs139012450 | 2 | 160 684 717 | LY75 | T | 0.504 | --0.09 | --0.11 | --0.06 | 1.3E−14 | Y |
| rs75497126 | 3 | 141 655 542 | RP11-271K21.11 | A | 0.993 | 0.52 | 0.39 | 0.66 | 2.8E−14 | Y |
| rs200401106 | 2 | 197 024 922 | STK17B | A | 0.871 | 0.12 | 0.09 | 0.16 | 4.2E−14 | Y |
| rs75581061 | 6 | 134 858 499 | RP11-557H15.4 | A | 0.877 | --0.12 | --0.16 | --0.09 | 7.9E−14 | Y |
| rs62472014 | 7 | 98 517 117 | TRRAP | C | 0.966 | 0.23 | 0.17 | 0.29 | 8.8E−14 | N |
| rs184837332 | 17 | 44 359 783 | ARL17B | G | 0.775 | 0.10 | 0.07 | 0.13 | 9.4E-14 | Y |
| rs78378222 | 17 | 7 571 752 | TP53 | T | 0.987 | 0.38 | 0.28 | 0.48 | 9.9E−14 | Y |
| rs6747952 | 2 | 239 069 926 | FAM132B | C | 0.556 | --0.08 | --0.10 | --0.06 | 1.3E−13 | Y |
| rs10865309 | 2 | 58 984 870 | LINC01122 | C | 0.863 | 0.12 | 0.09 | 0.15 | 1.3E−13 | N |
| rs117325033 | 6 | 140 511 519 | MIR3668 | T | 0.995 | --0.56 | --0.71 | --0.41 | 1.4E−13 | Y |
| rs115447786 | 6 | 34 354 073 | NUDT3 | C | 0.955 | 0.19 | 0.14 | 0.24 | 1.6E−13 | Y |
| rs4285804 | 10 | 104 386 309 | SUFU | T | 0.441 | 0.08 | 0.06 | 0.10 | 2.2E−13 | Y |
| rs1958078 | 14 | 70 354 858 | SMOC1 | A | 0.155 | --0.11 | --0.14 | --0.08 | 2.5E−13 | N |
| rs35158985 | 16 | 68 796 746 | CDH1 | A | 0.693 | 0.09 | 0.06 | 0.11 | 4.1E−13 | N |
| rs2023335 | 19 | 10 695 959 | AP1M2 | A | 0.056 | --0.18 | --0.23 | --0.13 | 4.2E−13 | Y |
| rs10893817 | 11 | 127 951 980 | RP11-702B10.2 | A | 0.351 | --0.08 | --0.11 | --0.06 | 4.9E−13 | Y |
| rs766009815 | 3 | 176 878 261 | TBL1XR1 | CA | 0.432 | --0.08 | --0.10 | --0.06 | 5.3E−13 | Y |
| rs34406510 | 1 | 209 936 964 | TRAF3IP3 | T | 0.766 | 0.09 | 0.07 | 0.12 | 7.4E−13 | N |
| rs6538413 | 12 | 93 749 125 | RP11-486A14.2 | G | 0.692 | --0.09 | --0.11 | --0.06 | 1.0E−12 | N |
| rs557536055 | 17 | 40 535 384 | STAT3 | C | 0.701 | --0.09 | --0.11 | --0.06 | 1.3E−12 | N |
| rs60152331 | 1 | 63 177 539 | RP11-230B22.1 | G | 0.623 | --0.08 | --0.10 | --0.06 | 2.6E−12 | Y |
| rs73369896 | 17 | 80 478 877 | FOXK2 | G | 0.922 | 0.15 | 0.11 | 0.19 | 3.4E−12 | Y |
| rs10811408 | 9 | 20 805 270 | FOCAD | T | 0.777 | 0.09 | 0.07 | 0.12 | 4.1E−12 | Y |
| rs34817 | 5 | 102 435 260 | GIN1 | G | 0.695 | --0.08 | --0.11 | --0.06 | 5.1E−12 | Y |
| rs71446622 | 13 | 113 365 480 | ATP11A | G | 0.910 | 0.13 | 0.10 | 0.17 | 5.8E−12 | N |
| rs8138197 | 22 | 43 114 551 | A4GALT | G | 0.529 | 0.08 | 0.05 | 0.10 | 5.9E−12 | N |
| rs72755040 | 15 | 64 342 757 | DAPK2 | G | 0.945 | 0.17 | 0.12 | 0.21 | 7.1E−12 | Y |
| rs12146644 | 11 | 95 492 878 | FAM76B | A | 0.618 | 0.08 | 0.06 | 0.10 | 9.6E−12 | Y |
| rs117107603 | 7 | 149 261 825 | ZNF767 | C | 0.984 | 0.30 | 0.21 | 0.39 | 9.6E−12 | Y |
| rs10910476 | 1 | 234 734 956 | IRF2BP2 | C | 0.444 | 0.08 | 0.05 | 0.10 | 1.2E−11 | Y |
| rs1520195 | 3 | 183 736 882 | ABCC5 | G | 0.509 | --0.07 | --0.10 | --0.05 | 1.3E−11 | Y |
| rs55693403 | 9 | 84 320 639 | RP11-154D17.1 | T | 0.942 | --0.16 | --0.20 | --0.11 | 2.4E−11 | Y |
| rs140073759 | 2 | 152 356 937 | RIF1 | T | 0.378 | 0.08 | 0.05 | 0.10 | 2.5E−11 | Y |
| rs61871633 | 11 | 2 366 260 | CD81-AS1 | C | 0.913 | --0.13 | --0.17 | --0.09 | 2.7E−11 | Y |
| rs762418439 | 16 | 691 325 | AL022341.1 | A | 0.616 | 0.09 | 0.06 | 0.11 | 2.7E−11 | Y |
| rs62553882 | 9 | 91 497 782 | PCNPP2 | C | 0.945 | 0.16 | 0.11 | 0.21 | 3.9E−11 | Y |
| rs10770059 | 11 | 9 770 910 | SWAP70 | T | 0.351 | 0.08 | 0.05 | 0.10 | 5.3E−11 | N |
| rs12650679 | 4 | 69 771 836 | RP11-468N14.13 | A | 0.871 | 0.11 | 0.08 | 0.14 | 5.4E−11 | Y |
| rs4541821 | 7 | 148 446 377 | CUL1 | T | 0.788 | 0.09 | 0.06 | 0.12 | 5.7E−11 | Y |
| rs117111916 | 19 | 14 529 082 | DDX39A | C | 0.945 | --0.16 | --0.20 | --0.11 | 7.1E−11 | Y |
| rs10916527 | 1 | 229 746 970 | TAF5L | T | 0.495 | --0.07 | --0.09 | --0.05 | 8.1E−11 | Y |
| rs1844428 | 4 | 145 574 196 | HHIP-AS1 | A | 0.867 | 0.11 | 0.07 | 0.14 | 8.2E−11 | Y |
| rs13255193 | 8 | 11 309 192 | FAM167A | T | 0.457 | --0.07 | --0.09 | --0.05 | 1.2E−10 | Y |
| rs759544745 | 7 | 150 759 219 | SLC4A2 | CGTGTGTGAGT | 0.424 | --0.07 | --0.09 | --0.05 | 1.6E−10 | Y |
| rs12478953 | 2 | 71 618 599 | ZNF638 | T | 0.339 | --0.07 | --0.10 | --0.05 | 1.8E−10 | Y |
| rs758263745 | 3 | 12 395 972 | PPARG | CA | 0.683 | 0.08 | 0.05 | 0.10 | 1.9E−10 | Y |
| rs62054589 | 16 | 81 068 748 | RP11-303E16.3 | T | 0.875 | 0.11 | 0.07 | 0.14 | 2.3E−10 | Y |
| rs118153075 | 12 | 112 825 973 | HECTD4 | C | 0.982 | 0.27 | 0.19 | 0.35 | 3.5E−10 | N |
| rs2011082 | 6 | 110 734 999 | DDO | G | 0.222 | 0.08 | 0.06 | 0.11 | 4.1E−10 | Y |
| rs2337113 | 18 | 46 452 327 | SMAD7 | A | 0.536 | --0.07 | --0.09 | --0.05 | 5.7E−10 | Y |
| rs11380525 | 7 | 124 427 517 | GPR37 | T | 0.715 | --0.08 | --0.10 | --0.05 | 7.9E−10 | Y |
| rs78587207 | 11 | 57 654 991 | RP11-734C14.2 | T | 0.681 | 0.07 | 0.05 | 0.10 | 8.2E−10 | Y |
| rs2140875 | 7 | 129 602 879 | RP11-306G20.1 | A | 0.186 | 0.09 | 0.06 | 0.11 | 1.2E−09 | N |
| rs9783086 | 1 | 225 588 376 | LBR | T | 0.835 | --0.09 | --0.12 | --0.06 | 1.2E−09 | Y |
| rs67795055 | 3 | 169 529 895 | LRRC34 | C | 0.776 | --0.08 | --0.11 | --0.05 | 1.6E−09 | Y |
| rs139372052 | 16 | 67 695 483 | PARD6A | T | 0.995 | --0.46 | --0.61 | --0.31 | 1.7E−09 | Y |
| rs2535922 | 14 | 73 447 240 | NA | A | 0.609 | --0.07 | --0.09 | --0.05 | 2.4E−09 | Y |
| rs200127094 | 7 | 123 430 826 | RNU6-11P | A | 0.920 | 0.12 | 0.08 | 0.16 | 2.6E−09 | Y |
| rs11072763 | 15 | 78 724 256 | IREB2 | A | 0.222 | --0.08 | --0.10 | --0.05 | 3.4E−09 | Y |
| rs7649045 | 3 | 196 519 878 | PAK2 | T | 0.406 | 0.07 | 0.04 | 0.09 | 7.1E−09 | Y |
| rs2672092 | 15 | 81 870 620 | CTD-2034I4.1 | T | 0.772 | 0.08 | 0.05 | 0.10 | 8.9E−09 | Y |
| rs6433891 | 2 | 181 969 709 | AC068196.1 | G | 0.299 | 0.07 | 0.05 | 0.09 | 9.7E−09 | Y |
| rs574063085 | 1 | 118 769 284 | RNA5SP56 | C | 0.993 | --0.43 | --0.57 | --0.28 | 1.0E−08 | Y |
| rs12514956 | 5 | 177 635 181 | HNRNPAB | G | 0.919 | --0.12 | --0.16 | --0.08 | 1.4E−08 | Y |
| rs111362998 | 15 | 74 760 541 | UBL7-AS1 | A | 0.940 | --0.14 | --0.18 | --0.09 | 1.5E−08 | Y |
| rs552000109 | 11 | 85 682 778 | PICALM | C | 0.841 | 0.09 | 0.06 | 0.12 | 2.3E−08 | Y |
| rs74346567 | 15 | 86 249 722 | AKAP13 | G | 0.944 | --0.13 | --0.18 | --0.09 | 3.0E−08 | N |
| rs4446237 | 3 | 171 472 296 | PLD1 | C | 0.534 | --0.06 | --0.08 | --0.04 | 3.5E−08 | Y |
| rs562038 | 1 | 120 254 545 | PHGDH | G | 0.320 | 0.06 | 0.04 | 0.09 | 4.0E−08 | Y |
| rs117629721 | 10 | 101 786 635 | snoU13 | C | 0.965 | 0.17 | 0.11 | 0.23 | 4.6E−08 | Y |
| rs190629717 | 8 | 144 310 590 | GPIHBP1 | G | 0.759 | --0.07 | --0.10 | --0.05 | 4.8E−08 | Y |
aNot reported in [12, 37] or in the GWAS catalog (https://www.ebi.ac.uk/gwas/) to be associated with MCV.
Summary of variants reaching nominal significance for heterogeneity of allelic effects (significance threshold: P < 2.1 × 10−4)
| Low drinkers ( | Heavy drinkers ( | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| SNP | % change MCV | 95%LCI | 95%UCI |
| % change MCV | 95%LCI | 95%UCI |
| Heterogeneity |
| rs218264 | −0.50 | −0.53 | −0.47 | 4.5 × 10−232 | −0.42 | −0.45 | −0.38 | 5.1 × 10−104 | 5.2 × 10−4 |
| rs855791 | −0.61 | −0.64 | −0.59 | 2.3 × 10−462 | −0.54 | −0.57 | −0.51 | 2.3 × 10−230 | 5.9 × 10−4 |
| rs144861591 | −1.15 | −1.20 | −1.11 | 5.0 × 10−487 | −1.03 | −1.09 | −0.97 | 3.8 × 10−246 | 2.0 × 10−3 |
| rs4936291 | 0.12 | 0.10 | 0.15 | 7.9 × 10−19 | 0.06 | 0.02 | 0.09 | 7.4 × 10−4 | 4.0 × 10−3 |
| rs10758657 | 0.41 | 0.38 | 0.44 | 1.4 × 10−139 | 0.34 | 0.30 | 0.38 | 2.9 × 10−63 | 0.01 |
| rs243076 | −0.25 | −0.28 | −0.23 | 9.4 × 10−79 | −0.20 | −0.23 | −0.17 | 2.3 × 10−32 | 0.01 |
| rs56142708 | −0.17 | −0.20 | −0.15 | 6.5 × 10−39 | −0.22 | −0.26 | −0.19 | 1.8 × 10−41 | 0.02 |
| rs67971539 | −0.20 | −0.23 | −0.17 | 8.4 × 10−37 | −0.14 | −0.18 | −0.10 | 2.4 × 10−12 | 0.02 |
| rs6592965 | −0.32 | −0.34 | −0.29 | 1.7 × 10−125 | −0.27 | −0.30 | −0.23 | 1.6 × 10−57 | 0.02 |
| rs12650679 | 0.09 | 0.05 | 0.13 | 1.2 × 10−5 | 0.16 | 0.11 | 0.21 | 7.3 × 10−11 | 0.02 |
| rs9471708 | 0.60 | 0.58 | 0.63 | 5.0 × 10−369 | 0.55 | 0.51 | 0.59 | 3.6 × 10−192 | 0.02 |
| rs12582170 | −0.19 | −0.22 | −0.15 | 4.7 × 10−25 | −0.12 | −0.17 | −0.08 | 1.3 × 10−7 | 0.02 |
| rs17296501 | −0.26 | −0.30 | −0.23 | 1.3 × 10−47 | −0.20 | −0.24 | −0.15 | 4.4 × 10−18 | 0.03 |
| rs9801017 | −0.33 | −0.35 | −0.30 | 4.1 × 10−126 | −0.28 | −0.31 | −0.25 | 1.5 × 10−60 | 0.04 |
| rs74401481 | 0.60 | 0.50 | 0.70 | 1.5 × 10−32 | 0.76 | 0.64 | 0.89 | 5.6 × 10−34 | 0.05 |