Literature DB >> 34097265

Analyses of Epigenetic Modification in Environmental Pollutants-Induced Neurotoxicity.

Guangxia Yu1,2, Zhenkun Guo1,2, Huangyuan Li3,4.   

Abstract

Epigenetics is one of the most rapidly expanding fields in biology, which plays important roles in environmental pollutant-induced neurotoxicity. Analyses of epigenetic modification is of great significance in providing more accurate information for the risk assessment and management of harmful factors. However, few studies have systematically summarized the analysis and detection methods for epigenetic modification. In this chapter, we summarized several popular methods for analyses of epigenetic modifications, including Methylated DNA Immunoprecipitation Sequencing (MeDIP-Seq) for genome-wide DNA methylation analyses, Quantitative Methylation Specific PCR (qMSP) for genome-specific DNA methylation analyses, methylated RNA immunoprecipitation sequencing (MeRIP-seq) for genome-wide RNA methylation analyses, MeRIP-qPCR for genome-specific RNA methylation analyses, qRT-PCR for the non-coding RNA, and western blot for the histone modification analyses. It could be helpful to the research about environmental epigenetic toxicology.

Entities:  

Keywords:  Chromatin structure; DNA methylation; Epigenetics; Histone modifications; Neurotoxicology; Non-coding RNA; RNA methylation

Year:  2021        PMID: 34097265     DOI: 10.1007/978-1-0716-1514-0_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  17 in total

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Authors:  Robert Feil; Mario F Fraga
Journal:  Nat Rev Genet       Date:  2012-01-04       Impact factor: 53.242

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Authors:  Baohong Zhang; Qinglian Wang; Xiaoping Pan
Journal:  J Cell Physiol       Date:  2007-02       Impact factor: 6.384

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Authors:  Aaron D Goldberg; C David Allis; Emily Bernstein
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

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Journal:  Cell Mol Life Sci       Date:  1998-01       Impact factor: 9.261

5.  RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage.

Authors:  Matthias Schaefer; Tim Pollex; Katharina Hanna; Francesca Tuorto; Madeleine Meusburger; Mark Helm; Frank Lyko
Journal:  Genes Dev       Date:  2010-08-01       Impact factor: 11.361

6.  LncRNA NR_030777 Alleviates Paraquat-Induced Neurotoxicity by Regulating Zfp326 and Cpne5.

Authors:  Hongyu Yang; Qingxia Lin; Nengzhou Chen; Zhousong Luo; Chunyan Zheng; Jing Li; Fuli Zheng; Zhenkun Guo; Ping Cai; Siying Wu; Yuan-Liang Wang; Huangyuan Li
Journal:  Toxicol Sci       Date:  2020-11-01       Impact factor: 4.849

7.  Arsenite-induced transgenerational glycometabolism is associated with up-regulation of H3K4me2 via inhibiting spr-5 in caenorhabditis elegans.

Authors:  Chenxi Gu; Yun Wen; Lu Wu; Yidi Wang; Qiuli Wu; Dayong Wang; Yubang Wang; Qizhan Liu; Jingshu Zhang
Journal:  Toxicol Lett       Date:  2020-03-04       Impact factor: 4.372

Review 8.  Chromatin remodeling: from transcription to cancer.

Authors:  Moshe Yaniv
Journal:  Cancer Genet       Date:  2014-03-22

9.  Effect of methotrexate/vitamin B12 on DNA methylation as a potential factor in leukemia treatment-related neurotoxicity.

Authors:  Victoria J Forster; Alex McDonnell; Rachel Theobald; Jill A McKay
Journal:  Epigenomics       Date:  2017-08-15       Impact factor: 4.778

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  1 in total

Review 1.  Epigenetics in neurodegenerative disorders induced by pesticides.

Authors:  Guangxia Yu; Qianqian Su; Yao Chen; Lingyan Wu; Siying Wu; Huangyuan Li
Journal:  Genes Environ       Date:  2021-12-10
  1 in total

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