Literature DB >> 34097191

Possible Ancestral Functions of the Genetic and RNA Operational Precodes and the Origin of the Genetic System.

Juan A Martínez-Giménez1, Rafael Tabares-Seisdedos2.   

Abstract

The origin of genetic systems is the central problem in the study of the origin of life for which various explanatory hypotheses have been presented. One model suggests that both ancestral transfer ribonucleic acid (tRNA) molecules and primitive ribosomes were originally involved in RNA replication (Campbell 1991). According to this model the early tRNA molecules catalyzed their own self-loading with a trinucleotide complementary to their anticodon triplet, while the primordial ribosome (protoribosome) catalyzed the transfer of these terminal trinucleotides from one tRNA to another tRNA harboring the growing RNA polymer at the 3´-end.Here we present the notion that the anticodon-codon-like pairs presumably located in the acceptor stem of primordial tRNAs (Rodin et al. 1996) (thus being and remaining, after the code and translation origins, the major contributor to the RNA operational code (Schimmel et al. 1993)) might have originally been used for RNA replication rather than translation; these anticodon and acceptor stem triplets would have been involved in accurately loading the 3'-end of tRNAs with a trinucleotide complementary to their anticodon triplet, thus allowing the accurate repair of tRNAs for their use by the protoribosome during RNA replication.We propose that tRNAs could have catalyzed their own trinucleotide self-loading by forming catalytic tRNA dimers which would have had polymerase activity. Therefore, the loading mechanism and its evolution may have been a basic step in the emergence of new genetic mechanisms such as genetic translation. The evolutionary implications of this proposed loading mechanism are also discussed.

Entities:  

Keywords:  Codon-anticodon interaction; Genetic code; Origin of genetic translation; RNA operational code; RNA replication; RNA world; Ribozyme

Year:  2021        PMID: 34097191     DOI: 10.1007/s11084-021-09610-7

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  69 in total

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Authors:  N Ban; P Nissen; J Hansen; P B Moore; T A Steitz
Journal:  Science       Date:  2000-08-11       Impact factor: 47.728

2.  tRNAs in the spotlight during protein biosynthesis.

Authors:  J Brosius
Journal:  Trends Biochem Sci       Date:  2001-11       Impact factor: 13.807

3.  A tRNA aminoacylation system for non-natural amino acids based on a programmable ribozyme.

Authors:  Yoshitaka Bessho; David R W Hodgson; Hiroaki Suga
Journal:  Nat Biotechnol       Date:  2002-07       Impact factor: 54.908

4.  Greater GNN pattern bias in sequence elements encoding conserved residues of ancient proteins may be an indicator of amino acid composition of early proteins.

Authors:  Dawn J Brooks; Jacques R Fresco
Journal:  Gene       Date:  2003-01-16       Impact factor: 3.688

Review 5.  Understanding prebiotic chemistry through the analysis of extraterrestrial amino acids and nucleobases in meteorites.

Authors:  Aaron S Burton; Jennifer C Stern; Jamie E Elsila; Daniel P Glavin; Jason P Dworkin
Journal:  Chem Soc Rev       Date:  2012-06-15       Impact factor: 54.564

6.  Unified prebiotically plausible synthesis of pyrimidine and purine RNA ribonucleotides.

Authors:  Sidney Becker; Jonas Feldmann; Stefan Wiedemann; Hidenori Okamura; Christina Schneider; Katharina Iwan; Antony Crisp; Martin Rossa; Tynchtyk Amatov; Thomas Carell
Journal:  Science       Date:  2019-10-04       Impact factor: 47.728

7.  A high-yielding, strictly regioselective prebiotic purine nucleoside formation pathway.

Authors:  Sidney Becker; Ines Thoma; Amrei Deutsch; Tim Gehrke; Peter Mayer; Hendrik Zipse; Thomas Carell
Journal:  Science       Date:  2016-05-13       Impact factor: 47.728

Review 8.  An RNA replisome as the ancestor of the ribosome.

Authors:  J H Campbell
Journal:  J Mol Evol       Date:  1991-01       Impact factor: 2.395

9.  Pb(II)-catalysed cleavage of the sugar-phosphate backbone of yeast tRNAPhe--implications for lead toxicity and self-splicing RNA.

Authors:  R S Brown; B E Hingerty; J C Dewan; A Klug
Journal:  Nature       Date:  1983 Jun 9-15       Impact factor: 49.962

10.  In vitro splicing of the ribosomal RNA precursor of Tetrahymena: involvement of a guanosine nucleotide in the excision of the intervening sequence.

Authors:  T R Cech; A J Zaug; P J Grabowski
Journal:  Cell       Date:  1981-12       Impact factor: 41.582

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