| Literature DB >> 34094916 |
Yalin Lu1,2,3, Gaochao Guo4, Rujun Hong1,2,3, Xingjie Chen1,2,3, Yan Sun1,2,3, Fang Liu5, Zhimeng Zhang6, Xun Jin7,8,9,10, Jun Dong11, Kai Yu1,2,3, Xuejun Yang1,2,3, Yang Nan1,2,3,12, Qiang Huang1,2,3,12.
Abstract
GBM (Glioblastoma multiform) is the most malignant tumor type of the central nervous system and has poor diagnostic and clinical outcomes. LncRNAs (Long non-coding RNAs) have been reported to participate in multiple biological and pathological processes, but their underlying mechanism remains poorly understood. Here, we aimed to explore the role of the lncRNA HAS2-AS1 (HAS2 antisense RNA 1) in GBM. GSE103227 was analyzed, and qRT-PCR was performed to measure the expression of HAS2-AS1 in GBM. FISH (Fluorescence in situ hybridization) was performed to verify the localization of HAS2-AS1. The interaction between HAS2-AS1 and miR-137 (microRNA-137) was predicted by LncBook and miRcode followed by dual-luciferase reporter assays, and the relationships among HAS2-AS1, miR-137 and LSD1 (lysine-specific demethylase 1) were assessed by WB (western blot) and qRT-PCR. Colony formation and CCK-8 (cell counting kit-8) assays were performed as functional tests. In vivo, nude mice were used to confirm the function of HAS2-AS1. HAS2-AS1 expression was upregulated in GBM cell lines, and HAS2-AS1 was localized mainly in the cytoplasm. In vitro, high HAS2-AS1 expression promoted proliferation, and knockdown of HAS2-AS1 significantly inhibited proliferation. Furthermore, HAS2-AS1 functioned as a ceRNA (competing endogenous RNA) of miR-137, leading to the disinhibition of its downstream target LSD1. The miR-137 level was downregulated by HAS2-AS1 overexpression and upregulated by HAS2-AS1 knockdown. In a subsequent study, LSD1 expression was negatively regulated by miR-137, while miR-137 reversed the LSD1 expression levels caused by HAS2-AS1. These results were further supported by the nude mouse tumorigenesis experiment; compared with xenografts with high HAS2-AS1 expression, the group with low levels of HAS2-AS1 exhibited suppressed proliferation and better survival. We conclude that lncRNA HAS2-AS1 promotes proliferation by functioning as a miR-137 decoy to increase LSD1 levels and thus might be a possible biomarker for GBM.Entities:
Keywords: LSD1; ceRNA; glioblastoma; lncRNA; miR-137
Year: 2021 PMID: 34094916 PMCID: PMC8173206 DOI: 10.3389/fonc.2021.634893
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1LncRNA HAS2-AS1 is highly expressed in glioma and negatively correlated with survival. (A) HAS2-AS1 expression in gliomas of different WHO grades from the GEO database. (B) Kaplan-Meier curves were generated between HAS2-AS1 and overall survival. The median HAS2-AS1 expression was used as a cutoff. (C) HAS2-AS1 expression in different GBM subtypes from the GEO database. (D) The levels of HAS2-AS1 in different GBM cell lines (LN18, U251, LNZ308, LN229, SNB19, U87MG) were analyzed by qRT-PCR. qRT-PCR was repeated three times independently. *P < 0.05, ***P < 0.001, ****P < 0.0001.
Figure 2HAS2-AS1 promotes proliferation in vitro, and HAS2-AS1 knockdown inhibits proliferation in vivo. (A) HAS2-AS1 expression in U87MG and U251 cells transfected with sh-HAS2-AS1 or shCtrl lentivirus was measured by qRT-PCR. GAPDH was used as an internal control. (B) CCK-8 assays were conducted to assess the proliferative abilities of U251 and U87MG cells after HAS2-AS1 knockdown. (C) Colony formation assays were performed to determine the proliferation potential after HAS2-AS1 knockdown in U251 and U87MG cells. (D) Representative bioluminescence images of intracranial xenografts implanted with U87MG HAS2-AS1-knockdown or shCtrl cells and the BLI (E) on days 7, 14, and 21. (F) The survival curves of intracranial xenografts of nude mice injected with U87MG HAS2-AS1-knockdown or shCtrl cells. (G) FISH showed that HAS2-AS1 was mainly localized in the cytoplasm, and HAS2-AS1 expression in intracranial xenografts was significantly reduced after HAS2-AS1 knockdown. (H) IHC showed that Ki-67 expression in intracranial xenografts was reduced after HAS2-AS1 knockdown. The experiment was repeated three times independently. The data are measurements and are expressed as the mean ± standard deviation. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001.
Figure 3HAS2-AS1 functions as a competing endogenous RNA for miR‐137. (A) FISH showed that HAS2-AS1 was mainly localized in the cytoplasms of nude mouse xenografts. (B) The bioinformatics analysis of potential miRNAs predicted by LncBook and miRcode. (C) Association analysis of the relationship between HAS2-AS1 and miR-137 predicted by the TCGA. (D) HAS2-AS1 expression in U87MG and U251 cells transfected with an HAS2-AS1 overexpression plasmid or empty vector was measured by qRT-PCR. GAPDH was used as an internal control. (E) miR-137 expression was measured by qRT-PCR after transfection of U87MG and U251 cells overexpressing the HAS2-AS1 plasmid or sh-HAS2-AS1 lentivirus. (F) Schematic diagram of potential miR-137 binding sites at HAS2-AS1 (WT) and mutation (mut) sites. (G) The luciferase reporter plasmid containing wild-type/mutant HAS2-AS1 was cotransfected into 293T cells with miR-137 mimics/inhibitor. After 48 h, dual-luciferase reporter assays were performed. The experiment was repeated three times independently. The data are measurements and expressed as the mean ± standard deviation. **P < 0.01, ***P < 0.001, ****P < 0.0001, NS, no significance.
Figure 4LSD1 is a target gene of miR-137 and is regulated by HAS2-AS1. (A) Bioinformatics analysis predicted the potential mRNAs shared between TargetScan, miRTarBase, miRDB and DIANA, 29 potential mRNAs (B) were identified. (C) The relationship between HAS2-AS1 and LSD1 was predicted by TCGA. (D) The miR-137 expression in U87MG and U251 cells after transduction of miR-137 mimics/inhibitor was validated by qRT-PCR. (E) The relative expression of LSD1 in U87MG and U251 cells after transduction of the miR-137 mimics/inhibitor as measured by qRT-PCR. (F) The relative expression of LSD1 in U87MG and U251 cells after overexpression/knockdown of HAS2-AS1 as determined by qRT-PCR. (G) The relative protein levels of LSD1 in U87MG and U251 cells after HAS2-AS1 overexpression/knockdown were confirmed by Western blot. GAPDH was used as a loading control. (H) The miR-137 inhibitor reversed the change in LSD1 expression caused by HAS2-AS1 silencing at the protein level. The experiment was repeated three times independently. The data are measurements and expressed as the mean ± standard deviation. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001.
Figure 5The mechanism diagram of HAS2-AS1, miR-137 and LSD1. Overexpressed HAS2-AS1 functions as a ceRNA by competitively binding to miR-137 to upregulate LSD1 expression, thereby promoting GBM proliferation.