| Literature DB >> 34093804 |
Shuna Liu1,2, Ming Wu1,2, Fang Wang1,2.
Abstract
Ovarian cancer is a serious threat to women's health; its early diagnosis rate is low and prone to metastasis and recurrence. The current conventional treatment for ovarian cancer is a combination of platinum and paclitaxel chemotherapy based on surgery. The recurrence and progression of ovarian cancer with poor prognosis is a major challenge in treatment. With rapid advances in technology, understanding of the molecular pathways involved in ovarian cancer recurrence and progression has increased, biomarker-guided treatment options can greatly improve the prognosis of patients. This review systematically discusses and summarizes existing and new information on prognostic factors and biomarkers of ovarian cancer, which is expected to improve the clinical management of patients and lead to effective personalized treatment. © The author(s).Entities:
Keywords: biomarker; ovarian cancer; prognostic factor
Year: 2021 PMID: 34093804 PMCID: PMC8176232 DOI: 10.7150/jca.47695
Source DB: PubMed Journal: J Cancer ISSN: 1837-9664 Impact factor: 4.207
Figure 1Flowchart of article selection process.
Blood-based biomarkers in ovarian cancer
| Expression or ratio | Potential clinical use | Example study | ||||
|---|---|---|---|---|---|---|
| Study | Studied biomarkers | Subsite | Patients(n) | |||
| Leptin | Increased | Poor prognosis | Kato, S., et al. (2015)16 | Leptin | EOC | 70 |
| miR-429 | Increased | Good prognosis | Meng, X., et al. (2015)17 | miR-429 | EOC | 180 |
| ADAM12 | Increased | Poor prognosis | Cheon, D. J., et al. (2015)18 | ADAM12 | HGSOC | 84 |
| Septin-9, clusterin | Increased | Poor prognosis | Lyu, N., et al. (2018)19 | Septin-9, clusterin | EOC | 137 |
| MMP3, TIMP3 | Increased | Poor prognosis | Cymbaluk-Ploska, A., et al. (2018)20 | MMP3, TIMP3 | OC | 104 |
| MSLN | Increased | Poor prognosis | Karolina Okla et al. (2018)21 | MSLN | EOC | 97 |
| CYFRA21-1 | Increased | Poor prognosis | Jin, C., et al. (2019)22 | CYFRA21-1 | EOC | 203 |
| NLR | Increased | Poor prognosis | Feng, Z., et al. (2016)23 | NLR | HGSOC | 875 |
| NLR | Increased | Poor prognosis | Li, Z., et al. (2017)24 | NLR | EOC | 654 |
| CRP / Alb | Increased | Poor prognosis | Liu, Y., et al. (2017)25 | CRP/Alb | OC | 200 |
| NLR, LDH | Increased | Poor prognosis | Mauricio, P., et al. (2018)26 | NLR, LDH | HGSOC | 128 |
| AFR | Decreased | Poor prognosis | Yu, W., et al. (2019)27 | AFR | EOC | 313 |
| NLR | Increased | Poor prognosis | Ceran, M. U., et al. (2019)28 | NLR | EOC | 244 |
| PLR | Increased | Poor prognosis | Ceran, M. U., et al. (2019)28 | PLR | EOC | 244 |
| NLR | Increased | Poor prognosis | Nomelini, R. S., et al. (2019)29 | NLR | OC | 72 |
| Fibulin-4 | Increased | Good prognosis | Chen, J., et al. (2015)30 | Fibulin-4 | OC | 160 |
| VEGF | Increased | Poor prognosis | Dobrzycka, B., et al. (2015)31 | VEGF | SOC | 92 |
| VEGF-A | Increased | Good prognosis | Komatsu, H., et al. (2017)32 | VEGF-A | EOC | 128 |
| LncRNA MALAT1 | Increased | Poor prognosis | Qiu, J. J., et al. (2018)33 | LncRNA MALAT1 | EOC | 60 |
| 8-OHdG | Increased | Poor prognosis | Pylväs-Eerola, M., et al. (2015)34 | 8-OHdG | EOC | 112 |
| TNFa/IL-4 ratio | Increased | Good prognosis | Hao, C. J., et al. (2016)35 | TNFa/IL-4 ratio | OC | 50 |
| sPD-L1 | Increased | Poor prognosis | Chatterjee, J., et al. (2017)36 | sPD-L1 | EOC | 71 |
| s-CD95L | Increased | Good prognosis | De La Motte Rouge, T., et al. (2019)37 | s-CD95L | HGSOC | 51 |
| absolute lymphocyte count | Decreased | Poor prognosis | Lee, Y. J., et al. (2019)38 | absolute lymphocyte count | OC | 537 |
| CD4/CD8 ratio | Decreased | Good prognosis | Waki, K., et al. (2020)39 | CD4/CD8 ratio | OC | 52 |
| CEBPA, C.69.OG>T polymorphism (rs34529039) | Increased | Poor prognosis | Konopka, B., et al. (2016)40 | CEBPA, C.69.OG>T polymorphism (rs34529039) | OC | 118 |
| hyperfibrinogenemia | Increased | Poor prognosis | Feng, Z., et al. (2016)41 | hyperfibrinogenemia | HGSOC | 875 |
| ERCC1 | Expression | Poor prognosis | Chebouti, I., et al. (2017)42 | ERCC1 | OC | 65 |
| miR-135a-3p | Increased | Good prognosis | Fukagawa, S., et al. (2017)43 | miR-135a-3p | OC | 98 |
| Gal-8, Gal-9 | Increased | Poor prognosis | Labrie, M., et al. (2017)44 | Gal-8, Gal-9 | HGSOC | 160 |
| Aurora A codon 57 SNP | Increased | Good prognosis | Niu, H., et al. (2017)45 | Aurora A codon 57 SNP | OC | 122 |
| miR 200a, miR 200b, miR 200c | Increased | Poor prognosis | Zuberi, M., et al. (2015)46 | miR 200a, miR 200b, miR 200c | EOC | 70 |
| miR-200b, miR-200c | Increased | Poor prognosis | Meng, X., et al. (2016)47 | miR-200b, miR-200c | EOC | 163 |
| KPNA2 | Increased | Poor prognosis | Huang, L., et al. (2017)48 | KPNA2 | EOC | 162 |
| survivin | Increased | Poor prognosis | Dobrzycka, B., et al. (2015)31 | survivin | SOC | 92 |
| Smac/DIABLO | Decreased | Poor prognosis | Dobrzycka, B., et al. (2015)31 | Smac/DIABLO | SOC | 92 |
| miR-200c, miR-141 | Increased | Good prognosis | Gao, Y.C., et al. (2015)49 | miR-200C, miR-141 | EOC | 93 |
| Platelet counts | Increased | Poor prognosis | Chen, Y., et al. (2015)50 | Platelet counts | EOC | 816 |
| SFRA | Increased | Poor prognosis | Kurosaki, A., et al. (2016)51 | SFRA | EOC | 128 |
| OPN | Increased | Poor prognosis | Zivny, J. H., et al. (2016)52 | OPN | SOC | 66 |
| microRNA-125b (miR-125b) | Increased | Poor prognosis | Zuberi, M., et al. (2016)53 | microRNA-125b (miR-125b) | EOC | 70 |
| miR-125b | Increased | Good prognosis | Zhu, T., et al. (2017)54 | miR-125b | EOC | 135 |
| BGA | Expression | Good prognosis | Montavon Sartorius, C., et al. (2018)55 | BGA | OC | 282 |
| RASSF1A rs1989839C > T SNP | Increased | Poor prognosis | He, W., et al. (2018)56 | RASSF1A rs1989839C > T SNP | OC | 1375 |
| MACC1 and S100A4 transcripts | Increased | Poor prognosis | Link, T., et al. (2019)57 | MACC1 and S100A4 transcripts | OC | 79 |
| sP (Hyp-Leu,Glu-Phe-Trp) | Decreased | Good prognosis | Lu, X., et al. (2019)58 | sP (Hyp-Leu,Glu-Phe-Trp) | EOC | 98 |
Abbreviations: miR: MicroRNA; NLR: the ratio of neutrophil count to lymphocyte count; AFR: albumin-to-fibrinogen ratio; PLR: platelet lymphocyte ratio; SNP: single Nucleotide Polymorphism; MSLN: Mesothelin; AAK: Aurora A kinase; Gal: Galectin; VEGF: vascular endothelial growth factor; sPD-L1: soluble PD - L1; OC: ovarian cancer; HGSOC: High grade serous ovarian cancer; EOC: epithelial ovarian cancer.
Tissue-based immunohistochemistry biomarkers in ovarian cancer
| Expression or ratio | Potential clinical use | Example study | ||||
|---|---|---|---|---|---|---|
| Study | Studied biomarkers | Subsite | Patients (n) | |||
| CTHRC1 | Increased | Poor prognosis | Hou, M., et al. (2015)59 | CTHRC1 | EOC | 88 |
| ZEB2 | Increased | Poor prognosis | Prislei, S., et al. (2015)60 | ZEB2 | EOC | 143 |
| CD44v6 | Increased | Poor prognosis | Tjhay, F., et al. (2015)61 | CD44v6 | EOC | 59 |
| miR-506 | Increased | Good prognosis | Sun, Y., et al. (2015)62 | miR-506 | EOC | 204 |
| FILIP1L | Increased | Good prognosis | Kwon, M., et al. (2016)63 | FILIP1L | OC | 369 |
| Par3 | Decreased | Good prognosis | Nakamura, H., et al. (2016)64 | Par3 | OC | 50 |
| MMP-14, CD44 | Double expression | Poor prognosis | Vos, M. C., et al. (2016)65 | MMP-14, CD44 | OC | 97 |
| OTUB1 | Expression | Poor prognosis | Wang, Y., et al. (2016)66 | OTUB1 | OC | 200 |
| ESRP1 | Increased | Good prognosis | Chen, L., et al. (2017)67 | ESRP1 | EOC | 109 |
| MDM2 | Increased | Good prognosis | Chen, Y., et al. (2017)68 | MDM2 | OC | 104 |
| CD24 | Increased | Poor prognosis | Nakamura, K., et al. (2017)69 | CD24 | OC | 174 |
| CCNG1 | Increased | Poor prognosis | Xu, Y., et al. (2019)70 | CCNG1 | HGSOC | 266 |
| DDR2 | Increased | Poor prognosis | Ramalho, S., et al. (2019)71 | DDR2 | HGSOC | 78 |
| CD8/Treg ratio | Increased | Good prognosis | Knutson, K. L., et al. (2015)72 | CD8/Treg ratio | EOC | 405 |
| PD-1, PD-L1 | Increased | Good prognosis | Darb-Esfahani, S., et al. (2016)73 | PD-1, PD-L1 | HGSOC | 215 |
| Tumour-infiltrating B cell and plasma cell | Increased | Poor prognosis | Lundgren, S., et al. (2016)74 | Tumour-infiltrating B cell and plasma cell | EOC | 154 |
| TIL | Increased | Good prognosis | James, F. R., et al. (2017)75 | TIL | EOC | 707 |
| T-bet+ TILs | Increased | Good prognosis | Xu, Y., et al. (2017)76 | T-bet+ TILs | EOC | 81 |
| PD-L1 | Increased | Poor prognosis | Zhu, J., et al. (2017)77 | PD-L1 | OCCC | 138 |
| Transcription factors WT1 and p53 | Increased | Poor prognosis | Carter, J. H., et al. (2018)78 | Transcription factors WT1 and p53 | OC | 96 |
| SOCS-1 | Increased | Poor prognosis | Nakagawa, S., et al. (2018)79 | SOCS-1 | OC | 83 |
| PD-L1 | Increased | Good prognosis | Kim, K. H., et al. (2019)80 | PD-L1 | EOC | 248 |
| TIL | Increased | Good prognosis | Mauricio, P., et al. (2019)81 | TIL | HGSOC | 128 |
| RCAS1-Ir | Increased | Poor prognosis | Szubert, S., et al. (2019)82 | RCAS1-Ir | EOC | 67 |
| VISTA | Expression | Good prognosis | Zong, L., et al. (2020)83 | VISTA | OC | 146 |
| Co-expression of CD8+ and granzyme B+ | Increased | Good prognosis | Jäntti, T., et al. (2020)84 | Co-expression of CD8+ and granzyme B+ | HGSOC | 67 |
| Nrf2 | Expression | Poor prognosis | Liew, P. L., et al. (2015)85 | Nrf2 | OC | 108 |
| SOD2 | Increased | Poor prognosis | Amano, T., et al. (2019)86 | SOD2 | EAOC | 61 |
| pIKK | Expression | Poor prognosis | Kinose, Y., et al. (2015)87 | pIKK | OC | 94 |
| PDGFβR | Increased | Poor prognosis | Corvigno, S., et al. (2016)88 | PDGFβR | SOC | 186 |
| VEGF-R1, VEGF-R2 | Expression | Good prognosis | Skirnisdottir, I., et al. (2016)89 | VEGF-R1, VEGF-R2 | EOC | 131 |
| Nestin | Increased | Poor prognosis | Onisim, A., et al. (2016)90 | Nestin | SOC | 85 |
| MIG-7 | Increased | Poor prognosis | Huang, B., et al. (2016)91 | MIG-7 | EOC | 121 |
| PTEN | Expression | Good prognosis | Shen, W., et al. (2017)92 | PTEN | OC | 76 |
| HIF-lα and VEGF | Expression | Poor prognosis | Shen, W., et al. (2017)92 | HIF-lα and VEGF | OC | 76 |
| AEG-1 | Increased | Poor prognosis | Yu, X., et al. (2018)93 | AEG-1 | EOC | 170 |
| VEGF, SEMA4D | Expression | Poor prognosis | Chen, Y., et al. (2018)94 | VEGF, SEMA4D | EOC | 124 |
| TBC1D16 | Increased | Good prognosis | Yang, Z., et al. (2018)95 | TBC1D16 | EOC | 156 |
| PGF | Increased | Poor prognosis | Meng, Q., et al. (2018)96 | PGF | EOC | 89 |
| VEGF-A | Decreased | Poor prognosis | Sopo, M., et al. (2019)97 | VEGF-A | OC | 86 |
| vasohibin-1, MACC1 | Increased | Poor prognosis | Yu, L., et al. (2019)98 | vasohibin-1, MACC1 | SOC | 124 |
| Tie-2 | Increased | Poor prognosis | Sopo, M., et al. (2020)99 | Tie-2 | HGSOC | 86 |
| FASN | Increased | Poor prognosis | Cai, Y., et al. (2015)100 | FASN | OC | 60 |
| CD73 | Increased | Poor prognosis | Turcotte, M., et al. (2015)101 | CD73 | HGSOC | 208 |
| SPINK1 | Increased | Poor prognosis | Mehner, C., et al. (2015)102 | SPINK1 | EOC | 490 |
| KCNN4, S100A14 | Increased | Poor prognosis | Zhao, H., et al. (2016)103 | KCNN4, S100A14 | SOC | 127 |
| EGFR | Increased | Poor prognosis | Xu, L., et al. (2016)104 | EGFR | EOC | 67 |
| Gab1 | Increased | Poor prognosis | Hu, L. and R. Liu (2016)105 | Gab1 | EOC | 124 |
| IL-36α | Decreased | Poor prognosis | Chang, L., et al. (2017)106 | IL-36α | EOC | 96 |
| DOT1L | Increased | Poor prognosis | Zhang, X., et al. (2017)107 | DOT1L | OC | 250 |
| KRT5, KRT6 | Increased | Poor prognosis | Ricciardelli, C., et al. (2017)108 | KRT5, KRT6 | SOC | 117 |
| hLSR | Increased | Poor prognosis | Hiramatsu, K., et al. (2018)109 | hLSR | EOC | 104 |
| PAUF | TLR4high and PAUFhigh/TLR4high | Poor prognosis | Choi, C. H., et al. (2018)110 | PAUF | EOC | 205 |
| PCDH8 | Decreased | Poor prognosis | Cao, Y., et al. (2018)111 | PCDH8 | OC | 68 |
| RIF1 | Increased | Poor prognosis | Liu, Y. B., et al. (2018)112 | RIF1 | EOC | 72 |
| FGFR2 | Increased | Poor prognosis | Li, M., et al. (2018)113 | FGFR2 | OC | 426 |
| FOXO1/PAX3 | Increased | Poor prognosis | Han, G. H., et al. (2019)114 | FOXO1 / PAX3 | EOC | 212 |
| pStat3 | Increased | Poor prognosis | Li, H., et al. (2020)115 | pStat3 | EOC | 156 |
| ATAD2 | Increased | Poor prognosis | Liu, Q., et al. (2020)116 | ATAD2 | OC | 60 |
| GRO-β | Increased | Poor prognosis | Ye, Q., et al. (2015)117 | GRO-β | OC | 136 |
| B7-H6 | Increased | Poor prognosis | Zhou, Y., et al. (2015)118 | B7-H6 | OC | 110 |
| OCT4, Notch1 and DLL4 | Increased | Poor prognosis | Yu, L., et al. (2016)119 | OCT4, Notch1 and DLL4 | EOC | 207 |
| EphA8 | Increased | Poor prognosis | Liu, X., et al. (2016)120 | EphA8 | OC | 233 |
| AGTR1 | Increased | Poor prognosis | Zhang, Q., et al. (2019)121 | AGTR1 | EOC | 902 |
| CK2α | Increased | Poor prognosis | Ma, Z., et al. (2017)122 | CK2α | EOC | 117 |
| CEP55 | Increased | Poor prognosis | Zhang, W., et al (2017)123 | CEP55 | EOC | 213 |
| ANXA1 | Increased | Good prognosis | Manai, M., et al. (2020)124 | ANXA1 | EOC | 156 |
| MAP3K8 | Increased | Poor prognosis | Gruosso, T., et al. (2015)125 | MAP3K8 | HGSOC | 139 |
| IL-33/ST2 axis | Increased | Poor prognosis | Tong, X., et al. (2016)126 | IL-33/ST2 axis | EOC | 152 |
| CDCP1, ADAM12 | Decreased | Good prognosis | Vlad, C., et al. (2016)127 | CDCP1, ADAM12 | SOC | 102 |
| FGFRL1 | Increased | Poor prognosis | Tai, H., et al. (2018)128 | FGFRL1 | OC | 90 |
| HSDL2 | Increased | Poor prognosis | Sun, Q., et al. (2018)129 | HSDL2 | OC | 74 |
| DUSP2 | Decreased | Poor prognosis | Liu, W., et al. (2019)130 | DUSP2 | HGSOC | 127 |
| Kallistatin (KAL) | Decreased | Poor prognosis | Wu, H., et al. (2019)131 | Kallistatin (KAL) | HGSOC | 312 |
| YTHDF1-EIF3C axis | Increased | Poor prognosis | Liu, T., et al. (2020)132 | YTHDF1-EIF3C axis | OC | 134 |
| IL-6R | Increased | Good prognosis | Isobe, A., et al. (2015)133 | IL-6R | OC | 94 |
| Usp7, MARCH7 | Increased | Poor prognosis | Zhang, L., et al. (2016)134 | Usp7, MARCH7 | EOC | 121 |
| PPA1 | Increased | Poor prognosis | Li, H., et al. (2017)135 | PPA1 | SOC | 139 |
| PATZ1 | Increased | Good prognosis | Zhao, C., et al. (2018)136 | PATZ1 | SOC | 208 |
| ARMC8 | Increased | Poor prognosis | Jiang, G., et al.(2015)137 | ARMC8 | OC | 247 |
| galectin-1 | Increased | Poor prognosis | Chen, L., et al. (2015)138 | galectin-1 | EOC | 110 |
| MAGE-A9 | Increased | Poor prognosis | Xu, Y., et al. (2015)139 | MAGE-A9 | EOC | 128 |
| TROP2 | Increased | Poor prognosis | Xu, N., et al. (2016)140 | TROP2 | EOC | 128 |
| GALNT6 | Increased | Poor prognosis | Lin, T. C., et al. (2017)141 | GALNT6 | EOC | 78 |
| Galectin-1 | Increased | Poor prognosis | Schulz, H., et al. (2017)142 | Galectin-1 | OC | 156 |
| Galectin-3 | Increased | Poor prognosis | Schulz, H., et al. (2017)142 | Galectin-3 | OC | 156 |
| Galectin-7 | Increased | Good prognosis | Schulz, H., et al. (2017)142 | Galectin-7 | OC | 156 |
| REDD1 | Increased | Poor prognosis | Chang, B., et al. (2018)143 | REDD1 | OC | 229 |
| RacGAP1 | Decreased | Good prognosis | Wang, C., et al. (2018)144 | RacGAP1 | EOC | 117 |
| PAI-1, PAI-RBP1 | Increased | Poor prognosis | Koensgen, D., et al. (2018)145 | PAI-1, PAI-RBP1 | OC | 156 |
| PRDX-1 | Increased | Poor prognosis | Sienko, J., et al. (2019)146 | PRDX-1 | OC | 55 |
| KAI1 | Decreased | Poor prognosis | Yu, L., et al. (2019)98 | KAI1 | SOC | 124 |
| CAV1, ATG4C | Increased | Poor prognosis | Zeng, Y., et al. (2020)147 | CAV1, ATG4C | EOC | 95 |
| CH13L1, FKBP4 | Increased | Poor prognosis | Lawrenson, K., et al. (2015)148 | CH13L1, FKBP4 | EOC | 200 |
| REG4 | Increased | Poor prognosis | Chen, S., et al. (2015)149 | REG4 | EOC | 337 |
| Spry2 | Decreased | Poor prognosis | Masoumi-Moghaddam, S., et al. (2015)150 | Spry2 | OC | 99 |
| SWI/SNF subunits | Decreased | Poor prognosis | Abou-Taleb, H., et al. (2016)151 | SWI/SNF subunits | EOC | 152 |
| KIF2A | Decreased | Poor prognosis | Wang, D., et al. (2016)152 | KIF2A | EOC | 111 |
| Salusin-β | Increased | Poor prognosis | Zhang,Q.,et al.(2017)153 | Salusin-β | OC | 57 |
| P38α, ATF2 | Increased | Poor prognosis | Song,W.J.,et al.(2017)154 | P38α, ATF2 | OSC | 120 |
| nERβ5 | Increased | Poor prognosis | Chan, K. K. L., et al. (2017)155 | nERβ5 | OC | 106 |
| SENP3/SMT3IP1 | Increased | Poor prognosis | Cheng, J., et al. (2017)156 | SENP3/SMT3IP1 | EOC | 124 |
| BCL6, Lewis y | Increased | Poor prognosis | Zhu, L., et al. (2017)157 | BCL6, Lewis y | OC | 103 |
| CXCL11, HMGA2 | Increased | Poor prognosis | Jin, C., et al. (2018)158 | CXCL11, HMGA2 | HGSOC | 110 |
| HS3ST2 | Decreased | Poor prognosis | Huang, R.L., et al. (2018)159 | HS3ST2 | EOC | 115 |
| KIF2A | Increased | Poor prognosis | Sheng, N., et al. (2018)160 | KIF2A | OC | 108 |
| TRIM59 | Increased | Good prognosis | Wang, Y., et al. (2018)161 | TRIM59 | OC | 192 |
| S100A10 | Increased | Poor prognosis | Wang, L., et al. (2019)162 | S100A10 | OC | 138 |
| PYGB | Increased | Poor prognosis | Zhou, Y., et al. (2019)163 | PYGB | OC | 94 |
| GalNAs T6, T14 | Increased | Poor prognosis | Sheta, R., et al. (2017)164 | GalNAs T6, T14 | HGSOC | 131 |
| TOPK | Increased | Poor prognosis | Ikeda, Y., et al. (2016)165 | TOPK | EOC | 163 |
| HER2, AURKA | Increased | Poor prognosis | Li, M.J., et al. (2017)166 | HER2, AURKA | OCCC | 60 |
| KIF14 | Increased | Poor prognosis | Qiu, H. L., et al. (2017)167 | KIF14 | EOC | 170 |
| PDCD5 | Decreased | Poor prognosis | Gao, L., et al. (2015)168 | PDCD5 | OC | 127 |
| MDM2 | Increased | Poor prognosis | Makii, C., et al. (2016)169 | MDM2 | OCCC | 75 |
| DNA-PKcs, Akt3, p53 | Increased | Poor prognosis | Shin, K., et al. (2016)170 | DNA-PKcs, Akt3, p53 | SOC | 132 |
| Gal-1, Gal-8, Gal-9p | Increased | Poor prognosis | Labrie, M., et al. (2017)171 | Gal-1, Gal-8, Gal-9p | HGSOC | 209 |
| Phosphorylated Akt, hTERT | Increased | Poor prognosis | Lee, Y. K., et al. (2015)172 | phosphorylated Akt, hTERT | EOC | 92 |
| JARID1B | Increased | Poor prognosis | Wang, L., et al. (2015)173 | JARID1B | EOC | 120 |
| ALDH1 | Increased | Good prognosis | Ayub, T. H., et al. (2015)174 | ALDH1 | EOC | 55 |
| PRP4K | Increased | Good prognosis | Corkery, D. P., et al. (2015)175 | PRP4K | OC | 199 |
| HtrA2 | Decreased | Poor prognosis | Miyamoto, M., et al. (2015)176 | HtrA2 | HGSOC | 142 |
| PTEN | Increased | Good prognosis | Wang, L., et al. (2015)177 | PTEN | EOC | 161 |
| NF-κBp65 | Increased | Poor prognosis | Wang, L., et al. (2015)177 | NF-κBp65 | EOC | 161 |
| eIF3a | Increased | Good prognosis | Zhang, Y., et al. (2015)178 | eIF3a | OC | 126 |
| GTF2H5 | Decreased | Good prognosis | Gayarre, J., et al. (2016)179 | GTF2H5 | HGSOC | 117 |
| POSTN | Increased | Poor prognosis | Sung, P. L., et al. (2016)180 | POSTN | EOC | 308 |
| SOX10 | Increased | Poor prognosis | Know, A.Y., et al. (2016)181 | SOX10 | EOC | 203 |
| GOLPH3L | Increased | Poor prognosis | He, S., et al. (2017)182 | GOLPH3L | OC | 177 |
| LC3A | Increased | Poor prognosis | Miyamoto, M., et al. (2017)183 | LC3A | OCCC | 117 |
| Stonin 2 (STON2) | Increased | Poor prognosis | Sun, X., et al. (2017)184 | Stonin 2 (STON2) | EOC | 89 |
| GATA3 | Increased | Poor prognosis | Chen, H. J., et al. (2018)185 | GATA3 | OC | 196 |
| EpCAM | Increased | Poor prognosis | Zhang, X., et al. (2018)186 | EpCAM | EOC | 109 |
| UBC13 | Decreased | Poor prognosis | Zhang, X., et al. (2018)187 | UBC13 | OC | 71 |
| 14-3-3ζ | Increased | Poor prognosis | Kim, H. J., et al. (2018)188 | 14-3-3ζ | OC | 88 |
| KCNN3 | Increased | Poor prognosis | Liu, X., et al. (2018)189 | KCNN3 | OC | 57 |
| HELQ | Increased | Poor prognosis | Long, J., et al. (2018)190 | HELQ | EOC | 87 |
| P15 PAF (KIAA0101) | Increased | Poor prognosis | Jin, C., et al. (2018)191 | P15 PAF (KIAA0101) | HGSOC | 118 |
| UTP23 | Decreased | Poor prognosis | Fu, Z., et al. (2019)192 | UTP23 | OC | 133 |
| ABCB9 | Decreased | Poor prognosis | Hou, L., et al. (2019)193 | ABCB9 | OC | 308 |
| PBK | Increased | Poor prognosis | Ma, H., et al. (2019)194 | PBK | HGSOC | 234 |
| Sorcin | Decreased | Good prognosis | Zhang, S., et al. (2019)195 | Sorcin | OC | 60 |
| PRC1 | Increased | Poor prognosis | Bu, H., et al. (2020)196 | PRC1 | HGSOC | 210 |
| NCALD | Decreased | Poor prognosis | Feng, L. Y. and L. Li (2020)197 | NCALD | EOC | 239 |
| CAP1 | Increased | Poor prognosis | Hua, M., et al. (2015)198 | CAP1 | EOC | 119 |
| CCNE1 | Increased | Poor prognosis | Ayhan, A., et al. (2017)199 | CCNE1 | OCCC | 120 |
| NUCKS | Increased | Poor prognosis | Shi, C., et al. (2017)200 | NUCKS | OC | 121 |
| TK1 | Increased | Poor prognosis | Wang, J., et al. (2017)201 | TK1 | SOC | 109 |
| MARCKS | Increased | Poor prognosis | Doghri, R., et al. (2017)202 | MARCKS | EOC | 118 |
| VEGF | Increased | Poor prognosis | Horikawa, N., et al. (2017)203 | VEGF | HGSOC | 56 |
| TBC1D8 | Increased | Poor prognosis | Chen, M., et al. (2019)204 | TBC1D8 | OC | 141 |
| PAX2 | Increased | Poor prognosis | Feng, Y., et al. (2020)205 | PAX2 | EOC | 152 |
| WRAP53β | Decreased | Poor prognosis | Hedström, E., et al. (2015)206 | WRAP53β | EOC | 151 |
| pH2AX | Increased | Poor prognosis | Mei, L., et al. (2015)207 | pH2AX | EOC | 87 |
| SLP-2 | Increased | Poor prognosis | Sun, F., et al. (2015)208 | SLP-2 | EOC | 140 |
| CD44v8-10 | Expression | Good prognosis | Sosulski, A., et al. (2016)209 | CD44v8-10 | SOC | 210 |
| P53 | Increased | Poor prognosis | Zuo, J., et al. (2016)210 | P53 | SOC | 183 |
| Highly sulfated CS | Increased | Poor prognosis | Van der steen, S.C., et al. (2016)211 | Highly sulfated CS | EOC | 255 |
| Adiponectin receptor-1 (AdipoR1) | Increased | Good prognosis | Li, X., et al. (2017)212 | Adiponectin receptor-1 (AdipoR1) | EOC | 73 |
| TP53 | Increased | Poor prognosis | Rzepecka, I. K., et al. (2017)213 | TP53 | HGSOC | 159 |
| SMAD3 | Increased | Poor prognosis | Sakr, S., et al. (2017)214 | SMAD3 | GCT | 88 |
| ALDH5A1 | Increased | Good prognosis | Tian, X., et al. (2017)215 | ALDH5A1 | OC | 192 |
| GR | Increased | Poor prognosis | Veneris, J. T., et al. (2017)216 | GR | EOC | 341 |
| LAMP3 | Increased | Poor prognosis | Wang, D., et al. (2017)217 | LAMP3 | EOC | 135 |
| HBXIP | Increased | Poor prognosis | Wang, Y., et al. (2017)218 | HBXIP | OC | 120 |
| HSF1 pSer326 | Expression | Poor prognosis | Yasuda, K., et al. (2017)219 | HSF1 pSer326 | EOC | 122 |
| COX-1, COX-2 | Increased | Poor prognosis | Beeghly-Fadiel, A., et al. (2018)220 | COX-1, COX-2 | EOC | 190 |
| GPR30 | Expression | Poor prognosis | Zhu, C. X., et al. (2018)221 | GPR30 | EOC | 110 |
| HJURP | Increased | Poor prognosis | Li, L., et al. (2018)222 | HJURP | HGSOC | 98 |
| Galectins-8 | Increased | Good prognosis | Schulz, H., et al. (2018)223 | Galectins-8 | OC | 156 |
| HER3 | Expression | Poor prognosis | Chung, Y. W., et al. (2019)224 | HER3 | EOC | 105 |
| ANXA8 | Increased | Poor prognosis | Gou, R., et al. (2019)225 | ANXA8 | OC | 122 |
| USP10/p14ARF | Decreased | Poor prognosis | Han, G. H., et al. (2019)226 | USP10/p14ARF | EOC | 212 |
| PKP3 | Increased | Poor prognosis | Qian, H., et al. (2019)227 | PKP3 | OC | 157 |
| PDGFR-β | Expression | Good prognosis | Szubert, S., et al. (2019)228 | PDGFR-β | EOC | 52 |
| CN | Increased | Poor prognosis | Xin, B., et al. (2019)229 | CN | OC | 50 |
| TSLP | Increased | Poor prognosis | Xu, L., et al. (2019)230 | TSLP | EOC | 144 |
| BUB1B, KIF11 and KIF20A | Increased | Poor prognosis | Zhang, L., et al. (2019)231 | BUB1B, KIF11 and KIF20A | OC | 50 |
| VDR | Increased | Poor prognosis | Czogalla, B., et al. (2020)232 | VDR | EOC | 156 |
Abbreviations: TIL: tumor infiltrates lymphocytes; Gal: Galectin; OC: ovarian cancer; HGSOC: High grade serous ovarian cancer; EOC: epithelial ovarian cancer.
Tissue-based RNA biomarkers in ovarian cancer
| Expression or ratio | Potential clinical use | Example study | |||||
|---|---|---|---|---|---|---|---|
| Study | Studied biomarkers | Method | Subsite | Patients (n) | |||
| microRNA(miR)-498 | Decreased | Poor prognosis | Cong, J., et al. (2015)242 | microRNA(miR)-498 | qRT-PCR | OC | 175 |
| miR-193b | Decreased | Poor prognosis | Li, H., et al. (2015)243 | miR-193b | qRT-PCR | OC | 116 |
| miR-572 | Decreased | Good prognosis | Zhang, X., et al. (2015)244 | miR-572 | qRT-PCR | OC | 108 |
| C7 | Decreased | Poor prognosis | Ying, L., et al. (2016)245 | C7 | qRT-PCR | OC | 156 |
| HER2, STAT3 | Increased | Poor prognosis | Shang, A. Q., et al. (2017)246 | HER2, STAT3 | qRT-PCR | OC | 136 |
| SOCS3 | Decreased | Poor prognosis | Shang, A. Q., et al. (2017)246 | SOCS3 | qRT-PCR | OC | 136 |
| lncRNA RAD51-AS1 | Increased | Poor prognosis | Zhang, X., et al. (2017)247 | lncRNA RAD51-AS1 | qRT-PCR | EOC | 163 |
| lncRNA LINC 00152 | Increased | Poor prognosis | Chen, P., et al. (2018)248 | lncRNA LINC 00152 | qRT-PCR | OC | 82 |
| miR-1294 | Increased | Good prognosis | Guo, T. Y., et al. (2018)249 | miR-1294 | qRT-PCR | EOC | 76 |
| lncRNA TUG1 | Increased | Poor prognosis | Li, T. H., et al. (2018)250 | lncRNA TUG1 | qRT-PCR | EOC | 96 |
| microRNA-424-5p (miR-424-5p) | Increased | Good prognosis | Liu, J., et al. (2018)251 | microRNA-424-5p (miR-424-5p) | qRT-PCR | EOC | 83 |
| lncRNA LINC00092 | Increased | Poor prognosis | Zhao, L., et al. (2017)252 | lncRNA LINC00092 | qRT-PCR | SOC | 58 |
| lncRNA PTPRG-AS1 | Increased | Poor prognosis | Ren, X. Y., et al. (2020)253 | lncRNA PTPRG-AS1 | qRT-PCR | EOC | 184 |
| lncRNA NEAT1 | Increased | Poor prognosis | Chen, Z. J., et al. (2016)254 | lncRNA NEAT1 | qRT-PCR | OC | 149 |
| ASAP1-IT1 | Increased | Good prognosis | Fu, Y., et al. (2016)255 | ASAP1-IT1 | qRT-PCR | EOC | 266 |
| miR-145 | Decreased | Poor prognosis | Kim,T.H.,et al.(2015)256 | miR-145 | qRT-PCR | HGSOC | 74 |
| microRNA-196a | Increased | Poor prognosis | Fan, Y., et al. (2015)257 | microRNA-196a | qRT-PCR | EOC | 156 |
| miR-552 | Increased | Poor prognosis | Zhao, W., et al. (2019)258 | miR-552 | qRT-PCR | OC | 110 |
| lncRNA AB073614 | Increased | Poor prognosis | Cheng, Z., et al. (2015)259 | lncRNA AB073614 | qRT-PCR | OC | 75 |
| TBL1XR1 | Increased | Poor prognosis | Ma, M. and N. Yu (2017)260 | TBL1XR1 | qRT-PCR | SOC | 116 |
| lncRNA MNX1-AS1 | Increased | Poor prognosis | Li, A. H. and H. H. Zhang (2017)261 | lncRNA MNX1-AS1 | qRT-PCR | EOC | 177 |
| lncRNA NEAT1 | Increased | Poor prognosis | Yong, W., et al. (2018)262 | lncRNA NEAT1 | qRT-PCR | HGSOC | 75 |
| miR-532-5p | Decreased | Poor prognosis | Wei, H., et al. (2018)263 | miR-532-5p | qRT-PCR | EOC | 145 |
| ANRIL | Increased | Poor prognosis | Qiu,J.J.,et al.(2015)264 | ANRIL | qRT-PCR | SOC | 68 |
| lncRNA CCAT1 | Increased | Poor prognosis | Cao,Y.,et al.(2017)265 | lncRNA CCAT1 | qRT-PCR | EOC | 72 |
| miR-208a-5p | Increased | Good prognosis | Mei, J., et al. (2019)266 | miR-208a-5p | qRT-PCR | OC | 61 |
| STAT2 | Increased | Poor prognosis | Chen, X., et al. (2020)267 | STAT2 | RT-PCR | OC | 62 |
| lncRNA miR503HG | Decreased | Poor prognosis | Zhu, D., et al. (2020)268 | lncRNA miR503HG | qRT-PCR | OC | 61 |
| lncRNA CCAT2 | Increased | Poor prognosis | Huang,S.,et al.(2016)269 | lncRNA CCAT2 | qRT-PCR | OC | 109 |
| GOLPH3 | Increased | Poor prognosis | Sun, J., et al. (2017)270 | GOLPH3 | qRT-PCR | EOC | 73 |
| lncRNA HOXA11as | Increased | Poor prognosis | Yim, G. W., et al. (2017)271 | lncRNA HOXA11as | qRT-PCR | SOC | 129 |
| miR-520h | Increased | Poor prognosis | Zhang, J., et al. (2018)272 | miR-520h | qRT-PCR | EOC | 116 |
| lncRNA SNHG16 | Increased | Poor prognosis | Yang, X. S., et al. (2018)273 | lncRNA SNHG16 | qRT-PCR | OC | 103 |
| lncRNA EBIC | Increased | Poor prognosis | Xu, Q. F., et al. (2018)274 | lncRNA EBIC | qRT-PCR | OC | 126 |
| lncRNA MALAT1 | Increased | Poor prognosis | Guo, C., et al. (2018)275 | lncRNA MALAT1 | qRT-PCR | OC | 60 |
| lncRNA RP11-552M11.4 | Increased | Poor prognosis | Huang, K., et al. (2018)276 | lncRNA RP11-552M11.4 | qRT-PCR | EOC | 67 |
| lncRNA OTUB1-isoform2 | Increased | Poor prognosis | Wang, S., et al. (2018)277 | lncRNA OTUB1-isoform2 | qRT-PCR | OC | 114 |
| HYOU1 | Increased | Poor prognosis | Li, X., et al. (2019)278 | HYOU1 | qRT-PCR | EOC | 127 |
| miR-203a-3p | Increased | Good prognosis | Liu, H. Y., et al. (2019)279 | miR-203a-3p | qRT-PCR | OC | 152 |
| LINC00339 | Increased | Poor prognosis | Pan, L., et al. (2019)280 | LINC00339 | qRT-PCR | OC | 75 |
| lncRNA SNHG20 | Increased | Poor prognosis | Wang, D., et al. (2019)281 | lncRNA SNHG20 | RT-PCR | EOC | 60 |
| miR-149 | Increased | Good prognosis | Zhao, L. W., et al. (2020)282 | miR-149 | qRT-PCR | OC | 72 |
| microRNA-506 (miR-506) | Increased | Good prognosis | Liu, G., et al. (2015)283 | microRNA-506 (miR-506) | qRT-PCR | EOC | 598 |
| CHI3L1 | Increased | Poor prognosis | Chiang, Y. C., et al. (2015)284 | CHI3L1 | qRT-PCR | EOC | 180 |
| IMP3 | Increased | Poor prognosis | Hsu, K. F., et al. (2015)285 | IMP3 | qRT-PCR | EOC | 140 |
| Lin28B | Increased | Poor prognosis | Hsu, K. F., et al. (2015)285 | Lin28B | qRT-PCR | EOC | 140 |
| Tribbles 2 (TRIB2) | Decreased | Poor prognosis | Kritsch, D., et al. (2017)286 | Tribbles 2 (TRIB2) | qRT-PCR | EOC | 149 |
| let-7e | Decreased | Poor prognosis | Xiao, M., et al. (2017)287 | let-7e | qRT-PCR | EOC | 84 |
| MAL | Increased | Poor prognosis | Zanotti, L., et al. (2017)288 | MAL | qRT-PCR | HGSOC | 74 |
| miR-98-5p | Increased | Good prognosis | Wang, Y., et al. (2018)289 | miR-98-5p | qRT-PCR | EOC | 97 |
| miR-1180 | Increased | Poor prognosis | Gu, Z. W., et al. (2019)290 | miR-1180 | qRT-PCR | OC | 59 |
| lncRNA GAS5 | Increased | Good prognosis | Long, X., et al. (2019)291 | lncRNA GAS5 | qRT-PCR | EOC | 53 |
| APOBEC3G | Increased | Good prognosis | Leonard, B., et al. (2016)292 | APOBEC3G | qRT-PCR | HGSOC | 354 |
| lncRNA MIR155HG | Increased | Good prognosis | Colvin, E. K., et al. (2020)293 | lncRNA MIR155HG | qRT-PCR | HGSOC | 67 |
| SMYD3 genetic polymorphisms | Expression | Poor prognosis | Liu, T. T., et al. (2016)294 | SMYD3 genetic polymorphisms | qRT-PCR | OC | 154 |
| CPS1-IT1 | Increased | Good prognosis | Wang, Y. S., et al. (2017)295 | CPS1-IT1 | qRT-PCR | EOC | 91 |
| CRNDE | Increased | Poor prognosis | Szafron, L. M., et al. (2015)296 | CRNDE | qRT-PCR | OC | 135 |
| GADD45A (1506T> C) | Increased | Poor prognosis | Yuan, C., et al. (2015)297 | GADD45A (1506T> C) | qRT-PCR | OC | 258 |
| miR-510, miR-129-3P | Decreased | Poor prognosis | Zhang,X.,et al.(2015)298 | miR-510, miR-129-3P | RT-qPCR,ISH | EOC | 78 |
| FAM215A | Increased | Good prognosis | Fu, Y., et al. (2016)255 | FAM215A | qRT-PCR | EOC | 266 |
| LIN-28B/let-7a/IGF-II axis | LIN-28Blowlet-7alow or LIN-28Blowlet-7ahighIGF-IIlow | Good prognosis | Lu, L., et al. (2016)299 | LIN-28B/let-7a/IGF-II axis | qRT-PCR | EOC | 211 |
| miR-200b, miR-1274A (tRNA Lys5) and miR-141 | Decreased | Good prognosis | Halvorsen, A. R., et al. (2017)300 | miR-200b, miR-1274A (tRNA Lys5) and miR-141 | qRT-PCR | OC | 207 |
| miR-595 | Decreased | Poor prognosis | Zhou, Q. H., et al. (2017)301 | miR-595 | qRT-PCR | EOC | 166 |
| KLK11, KLK15 | Increased | Good prognosis | Geng,X.,et al.(2017)302 | KLK11, KLK15 | RT-PCR | HGSOC | 139 |
| lncRNA LINC01088 | Decreased | Poor prognosis | Ai, H., et al. (2018)303 | lncRNA LINC01088 | qRT-PCR | EOC | 184 |
| lncRNA HMMR-AS1 | Increased | Poor prognosis | Chu, Z. P., et al. (2018)304 | lncRNA HMMR-AS1 | qRT-PCR | EOC | 152 |
| circ LARP4 | Decreased | Poor prognosis | Zou, T., et al. (2018)305 | circ LARP4 | qRT-PCR | OC | 78 |
| circ HIPK3 | Increased | Poor prognosis | Liu, N., et al. (2018)306 | circ HIPK3 | qRT-PCR | EOC | 69 |
| lncRNA DGCR5 | Decreased | Poor prognosis | Chen, H., et al. (2019)307 | lncRNA DGCR5 | qRT-PCR | OC | 66 |
| FANCD2 | Increased | Poor prognosis | Moes-Sosnowska, J., et al. (2019)308 | FANCD2 | qRT-PCR | OC | 99 |
| AK7 | Decreased | Poor prognosis | Zhang, X. Y., et al. (2021)309 | AK7 | RNAseq | OC | 308 |
Abbreviations: lnc: Long non-coding RNA; circ: circular; qRT-PCR: quantitative real time polymerase chain reaction; RT-PCR: real time polymerase chain reaction; IHC: Immunohistochemistry; ISH, in situ hybridization.
Tissue-based DNA biomarkers in ovarian cancer
| Expression or ratio | Potential clinical use | Example study | |||||
|---|---|---|---|---|---|---|---|
| Study | Studied biomarkers | Method | Subsite | Patients (n) | |||
| MYLK3 Methylation | Increased | Good prognosis | Phelps, D.L., et al. (2017)233 | MYLK3 Methylation | Pyrosequencing | SOC | 803 |
| HNF1B | Expression | Poor prognosis | Bubancova, I., et al. (2017)234 | HNF1B | NGS, HRM, MS-PCR | OC | 64 |
| GATA4 | Expression | Good prognosis | Bubancova, I., et al. (2017)234 | GATA4 | NGS, HRM, MS-PCR | OC | 64 |
| HS3ST2 | Increased | Poor prognosis | Huang, R.L., et al. (2018)159 | HS3ST2 | TMA | EOC | 115 |
| ZNF671 | Increased | Early relapse | Mase, S., et al. (2019)235 | ZNF671 | Pyrosequencing | HGSOC | 78 |
| Chromatin entropy nuclei | Increased | Poor prognosis | Nielsen, B. et al. (2018)236 | Chromatin entropy nuclei | Nuclear Texture analysis | OC | 246 |
| BRCA1/2 wild type | Expression | Poor prognosis | Eoh, K. J., et al. (2017)237 | BRCA1/2 wild type | Direct sequencing | EOC | 116 |
| BRCA1/2 | Expression | Good prognosis | Kim, S. I., et al. (2019)238 | BRCA1/2 | Sanger sequencing | HGSOC | 128 |
| ecDNA | Increased | Poor prognosis | Kalavska, K., et al. (2018)239 | ecDNA | RT-PCR | OC | 67 |
| The AT genotype of rs189897 | Expression | Poor prognosis | Liu, J., et al. (2019)240 | The AT genotype of rs189897 | Mass ARRAY | EOC | 200 |
| rs12921862 C/C | Expression | Good prognosis | Zhang, Y., et al. (2019)241 | rs12921862 C/C | PCR-RFLP | EOC | 165 |
Abbreviations: TMA: tissue microarrays; NGS: Next Generation Sequencing; MS-PCR: Methylation-Specific PCR; RT-PCR: real time polymerase chain reaction; PCR-RFLP: polymerase chain reaction-restriction fragment length polymorphism.