Literature DB >> 34092958

Molecular docking analysis of antimicrobial peptides with the CXCL1 protein target for colorectal cancer.

Praveen Kumar Kumar1, Shanmughavel Piramanayagam1.   

Abstract

Antimicrobial peptides (AMPs) play a prominent role in drug discovery due to the rapid increase in drug resistant infections. Hence, we report the molecular docking analysis of antimicrobial peptides MREEKKERKRD and MVQGAKRGGRLHRV with the target protein CXCL1 in the context of colorectal cancer for further consideration in drug discovery.
© 2021 Biomedical Informatics.

Entities:  

Keywords:  Antimicrobial peptides; Peptide docking; Schrodinger; colorectal cancer

Year:  2021        PMID： 34092958      PMCID： PMC8131574          DOI： 10.6026/97320630017369

Source DB:  PubMed          Journal:  Bioinformation        ISSN： 0973-2063


  10 in total

1.  Structure validation by Calpha geometry: phi,psi and Cbeta deviation.

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Journal:  Proteins       Date:  2003-02-15

2.  Colorectal cancer epidemiology: incidence, mortality, survival, and risk factors.

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Review 3.  Integrated Modeling Program, Applied Chemical Theory (IMPACT).

Authors:  Jay L Banks; Hege S Beard; Yixiang Cao; Art E Cho; Wolfgang Damm; Ramy Farid; Anthony K Felts; Thomas A Halgren; Daniel T Mainz; Jon R Maple; Robert Murphy; Dean M Philipp; Matthew P Repasky; Linda Y Zhang; Bruce J Berne; Richard A Friesner; Emilio Gallicchio; Ronald M Levy
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

4.  The I-TASSER Suite: protein structure and function prediction.

Authors:  Jianyi Yang; Renxiang Yan; Ambrish Roy; Dong Xu; Jonathan Poisson; Yang Zhang
Journal:  Nat Methods       Date:  2015-01       Impact factor: 28.547

5.  Colorectal cancer statistics, 2017.

Authors:  Rebecca L Siegel; Kimberly D Miller; Stacey A Fedewa; Dennis J Ahnen; Reinier G S Meester; Afsaneh Barzi; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2017-03-01       Impact factor: 508.702

6.  Global cancer statistics.

Authors:  Ahmedin Jemal; Freddie Bray; Melissa M Center; Jacques Ferlay; Elizabeth Ward; David Forman
Journal:  CA Cancer J Clin       Date:  2011-02-04       Impact factor: 508.702

Review 7.  Antimicrobial peptides as novel therapeutics for non-small cell lung cancer.

Authors:  Nitesh K Kunda
Journal:  Drug Discov Today       Date:  2019-11-29       Impact factor: 7.851

8.  Curcumin nanomedicine: a road to cancer therapeutics.

Authors:  Murali M Yallapu; Meena Jaggi; Subhash C Chauhan
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

9.  CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues.

Authors:  Joe Dundas; Zheng Ouyang; Jeffery Tseng; Andrew Binkowski; Yaron Turpaz; Jie Liang
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

10.  UniProt: a worldwide hub of protein knowledge.

Authors: 
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971
  10 in total
  1 in total

1.  Molecular docking analysis of CDK-1 inhibitors from Chrysophyllum cainito leaves.

Authors:  Yesudass Antony Prabhu; Praveen Kumar Kumar; Shanmughavel Piramanayagam; Muthu Vijaya Sarathy; Samiappan Kavitha
Journal:  Bioinformation       Date:  2021-05-31
  1 in total

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