Literature DB >> 34091784

Complete genome sequences of anemone mosaic virus and ranunculus mild mosaic virus isolated from anemone imported from the Netherlands into Japan.

Yuya Imamura1, Moritsugu Oishi1, Yuji Fujiwara1, Hironobu Yanagisawa2.   

Abstract

Anemone mosaic virus (AnMV) and ranunculus mild mosaic virus (RanMMV) infect anemone plants, which exhibit characteristic mosaic patterns on their leaves. Employing next-generation sequencing of plant material imported from the Netherlands, the complete genome sequences of these two viruses were determined for the first time. AnMV and RanMMV have 9698 and 9537 nucleotides (nt), respectively, excluding the poly(A) tail. They share 80.0%/82.0% and 98.0%/97.0% nt/amino acid (aa) sequence identity, which is above the species demarcation value, in the previously reported AnMV and RanMMV coat protein sequences, but they share 69.0%/70.0% nt/aa sequence identity or less with other potyviruses in all 10 mature protein coding regions of the genome. Additionally, phylogenetic analysis confirmed the relationship of the AnMV and RanMMV genome sequences to previously reported partial sequences and placed them within the genus Potyvirus. These results show that these two viruses represent separate species within the genus Potyvirus.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.

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Year:  2021        PMID: 34091784     DOI: 10.1007/s00705-021-05133-8

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.685


  9 in total

Review 1.  Potyvirus proteins: a wealth of functions.

Authors:  S Urcuqui-Inchima; A L Haenni; F Bernardi
Journal:  Virus Res       Date:  2001-04       Impact factor: 3.303

2.  Characterization of Four Viral Species Belonging to the Family Potyviridae Isolated from Ranunculus asiaticus.

Authors:  M Turina; M Ciuffo; R Lenzi; L Rostagno; L Mela; E Derin; S Palmano
Journal:  Phytopathology       Date:  2006-06       Impact factor: 4.025

3.  First Report of Ranunculus mild mosaic virus on Ranunculus asiaticus in Yunnan Province, China.

Authors:  J H Wang; S Zhao; X M Yang
Journal:  Plant Dis       Date:  2008-11       Impact factor: 4.438

4.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

5.  Anemone - an Additional Perennial Ornamental Host of Tobacco Rattle Virus in the U.S.

Authors:  B E Lockhart; J A Westendorp
Journal:  Plant Dis       Date:  1998-06       Impact factor: 4.438

6.  An overlapping essential gene in the Potyviridae.

Authors:  Betty Y-W Chung; W Allen Miller; John F Atkins; Andrew E Firth
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-11       Impact factor: 11.205

7.  ICTV Virus Taxonomy Profile: Potyviridae.

Authors:  Stephen J Wylie; Mike Adams; Celia Chalam; Jan Kreuze; Juan José López-Moya; Kazusato Ohshima; Shelly Praveen; Frank Rabenstein; Drake Stenger; Aiming Wang; F Murilo Zerbini
Journal:  J Gen Virol       Date:  2017-03       Impact factor: 3.891

8.  Combined DECS Analysis and Next-Generation Sequencing Enable Efficient Detection of Novel Plant RNA Viruses.

Authors:  Hironobu Yanagisawa; Reiko Tomita; Koji Katsu; Takuya Uehara; Go Atsumi; Chika Tateda; Kappei Kobayashi; Ken-Taro Sekine
Journal:  Viruses       Date:  2016-03-07       Impact factor: 5.048

9.  Genome-Wide Variation in Potyviruses.

Authors:  Deepti Nigam; Katherine LaTourrette; Pedro F N Souza; Hernan Garcia-Ruiz
Journal:  Front Plant Sci       Date:  2019-11-12       Impact factor: 5.753

  9 in total

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