Literature DB >> 34081209

Fungal diversity and occurrence of mycotoxin producing fungi in tropical vineyards.

Lorena Dutra-Silva1, Giuliano E Pereira2, Luís Roberto Batista1, Filipe P Matteoli3.   

Abstract

Grapevine cultivars are distributed worldwide, nevertheless the fermentation of its grape berries renders distinct wine products that are highly associated to the local fungal community. Despite the symbiotic association between wine and the fungal metabolism, impacting both the terroir and mycotoxin production, few studies have explored the vineyard ecosystem fungal community using both molecular marker sequencing and mycotoxin production assessment. In this study, we investigated the fungal community of three grapevine cultivars (Vitis vinifera L.) in two tropical vineyards. Illumina MiSeq sequencing was performed on two biocompartments: grape berries (GB) and grapevine soil (GS); yielding a total of 578,495 fungal internal transcribed spacer 1 reads, which were used for taxonomic classification. GB and GS fungal communities were mainly constituted by Ascomycota phylum. GS harbors a significant richer and more diverse fungal community than GB. Among GB samples, Syrah grape berries exclusively shared fungal community included wine-associated yeasts (e.g. Saccharomycopsis vini) that may play key roles in wine terroir. Mycotoxin production assessment revealed the high potential of Aspergillus section Flavi and Penicillium section Citrina isolates to produce aflatoxin B1-B2 and citrinin, respectively. This is the first study to employ next-generation sequencing to investigate vineyard associated fungal community in Brazil. Our findings provide valuable insights on the available tools for fungal ecology assessment applied to food products emphasizing the coexistence between classical and molecular tools.

Entities:  

Keywords:  Fungal ecology; Next-generation sequencing; Terroir; Tropical vineyard; Wine

Year:  2021        PMID: 34081209     DOI: 10.1007/s11274-021-03081-8

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  50 in total

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Journal:  Appl Microbiol Biotechnol       Date:  2016-01-05       Impact factor: 4.813

2.  Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate.

Authors:  Nicholas A Bokulich; John H Thorngate; Paul M Richardson; David A Mills
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Journal:  PLoS One       Date:  2016-07-08       Impact factor: 3.240

4.  Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics.

Authors:  Nicholas A Bokulich; Thomas S Collins; Chad Masarweh; Greg Allen; Hildegarde Heymann; Susan E Ebeler; David A Mills
Journal:  mBio       Date:  2016-06-14       Impact factor: 7.867

Review 5.  From Vineyard Soil to Wine Fermentation: Microbiome Approximations to Explain the "terroir" Concept.

Authors:  Ignacio Belda; Iratxe Zarraonaindia; Matthew Perisin; Antonio Palacios; Alberto Acedo
Journal:  Front Microbiol       Date:  2017-05-08       Impact factor: 5.640

6.  Yeast species isolated from Texas High Plains vineyards and dynamics during spontaneous fermentations of Tempranillo grapes.

Authors:  Matthias Bougreau; Kenia Ascencio; Marie Bugarel; Kendra Nightingale; Guy Loneragan
Journal:  PLoS One       Date:  2019-05-02       Impact factor: 3.240

7.  Microbiome of vineyard soils is shaped by geography and management.

Authors:  Emanuela Coller; Alessandro Cestaro; Roberto Zanzotti; Daniela Bertoldi; Massimo Pindo; Simone Larger; Davide Albanese; Enzo Mescalchin; Claudio Donati
Journal:  Microbiome       Date:  2019-11-08       Impact factor: 14.650

8.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

9.  Vineyard under-vine floor management alters soil microbial composition, while the fruit microbiome shows no corresponding shifts.

Authors:  Ming-Yi Chou; Justine Vanden Heuvel; Terrence H Bell; Kevin Panke-Buisse; Jenny Kao-Kniffin
Journal:  Sci Rep       Date:  2018-07-23       Impact factor: 4.379

10.  A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms.

Authors:  Stefanos Banos; Guillaume Lentendu; Anna Kopf; Tesfaye Wubet; Frank Oliver Glöckner; Marlis Reich
Journal:  BMC Microbiol       Date:  2018-11-20       Impact factor: 3.605

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  1 in total

1.  Fungal Diversity and Composition of the Continental Solar Saltern in Añana Salt Valley (Spain).

Authors:  Maia Azpiazu-Muniozguren; Alba Perez; Aitor Rementeria; Irati Martinez-Malaxetxebarria; Rodrigo Alonso; Lorena Laorden; Javier Gamboa; Joseba Bikandi; Javier Garaizar; Ilargi Martinez-Ballesteros
Journal:  J Fungi (Basel)       Date:  2021-12-14
  1 in total

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