Literature DB >> 34074530

Mass spectrometry based proteomics for developmental neurobiology in the amphibian Xenopus laevis.

Aparna B Baxi1, Leena R Pade2, Peter Nemes3.   

Abstract

The South African clawed frog (Xenopus laevis), a prominent vertebrate model in cell and developmental biology, has been instrumental in studying molecular mechanisms of neural development and disease. Recently, high-resolution mass spectrometry (HRMS), a bioanalytical technology, has expanded the molecular toolbox of protein detection and characterization (proteomics). This chapter overviews the characteristics, advantages, and challenges of this biological model and technology. Discussions are offered on their combined use to aid studies on cell differentiation and development of neural tissues. Finally, the emerging integration of proteomics and other 'omic technologies is reflected on to generate new knowledge, drive and test new hypotheses, and ultimately, advance the understanding of neural development during states of health and disease.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Mass spectrometry; Metabolomics; Proteomics; Single cell; Xenopus

Mesh:

Year:  2021        PMID: 34074530      PMCID: PMC8314003          DOI: 10.1016/bs.ctdb.2021.04.002

Source DB:  PubMed          Journal:  Curr Top Dev Biol        ISSN: 0070-2153            Impact factor:   4.897


  61 in total

Review 1.  The role of separation science in proteomics research.

Authors:  H J Issaq
Journal:  Electrophoresis       Date:  2001-10       Impact factor: 3.535

Review 2.  Xenopus as a model organism for birth defects-Congenital heart disease and heterotaxy.

Authors:  Anna R Duncan; Mustafa K Khokha
Journal:  Semin Cell Dev Biol       Date:  2016-02-22       Impact factor: 7.727

3.  Fates of the blastomeres of the 16-cell stage Xenopus embryo.

Authors:  S A Moody
Journal:  Dev Biol       Date:  1987-02       Impact factor: 3.582

4.  Microprobe Capillary Electrophoresis Mass Spectrometry for Single-cell Metabolomics in Live Frog (Xenopus laevis) Embryos.

Authors:  Rosemary M Onjiko; Erika P Portero; Sally A Moody; Peter Nemes
Journal:  J Vis Exp       Date:  2017-12-22       Impact factor: 1.355

5.  Metabolic Comparison of Dorsal versus Ventral Cells Directly in the Live 8-cell Frog Embryo by Microprobe Single-cell CE-ESI-MS.

Authors:  Rosemary M Onjiko; David O Plotnick; Sally A Moody; Peter Nemes
Journal:  Anal Methods       Date:  2017-05-09       Impact factor: 2.896

6.  In Situ Microprobe Single-Cell Capillary Electrophoresis Mass Spectrometry: Metabolic Reorganization in Single Differentiating Cells in the Live Vertebrate (Xenopus laevis) Embryo.

Authors:  Rosemary M Onjiko; Erika P Portero; Sally A Moody; Peter Nemes
Journal:  Anal Chem       Date:  2017-05-01       Impact factor: 6.986

7.  The roles of post-translational modifications in the context of protein interaction networks.

Authors:  Guangyou Duan; Dirk Walther
Journal:  PLoS Comput Biol       Date:  2015-02-18       Impact factor: 4.475

8.  Quantitative Proteomics After Spinal Cord Injury (SCI) in a Regenerative and a Nonregenerative Stage in the Frog Xenopus laevis.

Authors:  Dasfne Lee-Liu; Liangliang Sun; Norman J Dovichi; Juan Larraín
Journal:  Mol Cell Proteomics       Date:  2018-01-22       Impact factor: 5.911

9.  MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomics.

Authors:  Andy T Kong; Felipe V Leprevost; Dmitry M Avtonomov; Dattatreya Mellacheruvu; Alexey I Nesvizhskii
Journal:  Nat Methods       Date:  2017-04-10       Impact factor: 28.547

Review 10.  Xenopus laevis as a Model Organism for the Study of Spinal Cord Formation, Development, Function and Regeneration.

Authors:  Laura N Borodinsky
Journal:  Front Neural Circuits       Date:  2017-11-23       Impact factor: 3.492

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.