Literature DB >> 34073089

Alternate Roles of Sox Transcription Factors beyond Transcription Initiation.

Yuli Zhang1, Linlin Hou1.   

Abstract

Sox proteins are known as crucial transcription factors for many developmental processes and for a wide range of common diseases. They were believed to specifically bind and bend DNA with other transcription factors and elicit transcriptional activation or repression activities in the early stage of transcription. However, their functions are not limited to transcription initiation. It has been showed that Sox proteins are involved in the regulation of alternative splicing regulatory networks and translational control. In this review, we discuss the current knowledge on how Sox transcription factors such as Sox2, Sry, Sox6, and Sox9 allow the coordination of co-transcriptional splicing and also the mechanism of SOX4-mediated translational control in the context of RNA polymerase III.

Entities:  

Keywords:  Sox proteins; co-transcriptional splicing; transcription; transcription factor; translational control

Year:  2021        PMID: 34073089     DOI: 10.3390/ijms22115949

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  86 in total

Review 1.  Sry and Sox9: mammalian testis-determining genes.

Authors:  P Koopman
Journal:  Cell Mol Life Sci       Date:  1999-06       Impact factor: 9.261

2.  Epigenomic Profiling Discovers Trans-lineage SOX2 Partnerships Driving Tumor Heterogeneity in Lung Squamous Cell Carcinoma.

Authors:  Takashi Sato; Seungyeul Yoo; Ranran Kong; Abhilasha Sinha; Prashanth Chandramani-Shivalingappa; Ayushi Patel; Maya Fridrikh; Osamu Nagano; Takashi Masuko; Mary Beth Beasley; Charles A Powell; Jun Zhu; Hideo Watanabe
Journal:  Cancer Res       Date:  2019-09-24       Impact factor: 12.701

Review 3.  Transcription factors: from enhancer binding to developmental control.

Authors:  François Spitz; Eileen E M Furlong
Journal:  Nat Rev Genet       Date:  2012-08-07       Impact factor: 53.242

4.  The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila.

Authors:  T W Burke; J T Kadonaga
Journal:  Genes Dev       Date:  1997-11-15       Impact factor: 11.361

5.  Switching of the core transcription machinery during myogenesis.

Authors:  Maria Divina E Deato; Robert Tjian
Journal:  Genes Dev       Date:  2007-08-17       Impact factor: 11.361

6.  Structure-function analysis of mouse Sry reveals dual essential roles of the C-terminal polyglutamine tract in sex determination.

Authors:  Liang Zhao; Ee Ting Ng; Tara-Lynne Davidson; Enya Longmuss; Johann Urschitz; Marlee Elston; Stefan Moisyadi; Josephine Bowles; Peter Koopman
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-29       Impact factor: 11.205

7.  RNA virus interference via CRISPR/Cas13a system in plants.

Authors:  Rashid Aman; Zahir Ali; Haroon Butt; Ahmed Mahas; Fatimah Aljedaani; Muhammad Zuhaib Khan; Shouwei Ding; Magdy Mahfouz
Journal:  Genome Biol       Date:  2018-01-04       Impact factor: 13.583

Review 8.  Structure and mechanism of the RNA polymerase II transcription machinery.

Authors:  Allison C Schier; Dylan J Taatjes
Journal:  Genes Dev       Date:  2020-04-01       Impact factor: 11.361

9.  Knockout of the HMG domain of the porcine SRY gene causes sex reversal in gene-edited pigs.

Authors:  Stefanie Kurtz; Andrea Lucas-Hahn; Brigitte Schlegelberger; Gudrun Göhring; Heiner Niemann; Thomas C Mettenleiter; Björn Petersen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-12       Impact factor: 11.205

10.  SOX9 has distinct regulatory roles in alternative splicing and transcription.

Authors:  Michael Girardot; Elsa Bayet; Justine Maurin; Philippe Fort; Pierre Roux; Peggy Raynaud
Journal:  Nucleic Acids Res       Date:  2018-09-28       Impact factor: 16.971

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  2 in total

1.  Epigenetic modification mechanism of histone demethylase KDM1A in regulating cardiomyocyte apoptosis after myocardial ischemia-reperfusion injury.

Authors:  Lin He; Yanbo Wang; Jin Luo
Journal:  PeerJ       Date:  2022-08-05       Impact factor: 3.061

2.  Genome-wide identification, phylogenetic and expression pattern analysis of Dof transcription factors in blueberry (Vaccinium corymbosum L.).

Authors:  Tianjie Li; Xiaoyu Wang; Dinakaran Elango; Weihua Zhang; Min Li; Fan Zhang; Qi Pan; Ying Wu
Journal:  PeerJ       Date:  2022-10-03       Impact factor: 3.061

  2 in total

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