Literature DB >> 34072976

Advances in the Study of Metabolomics and Metabolites in Some Species Interactions.

Rui Liu1, Zheng-Xue Bao1, Pei-Ji Zhao1, Guo-Hong Li1.   

Abstract

In the natural environment, interactions between species are a common natural phenomena. The mechanisms of interaction between different species are mainly studied using genomic, transcriptomic, proteomic, and metabolomic techniques. Metabolomics is a crucial part of system biology and is based on precision instrument analysis. In the last decade, the emerging field of metabolomics has received extensive attention. Metabolomics not only provides a qualitative and quantitative method for studying the mechanisms of interactions between different species, but also helps clarify the mechanisms of defense between the host and pathogen, and to explore new metabolites with various biological activities. This review focuses on the methods and progress of interspecies metabolomics. Additionally, the prospects and challenges of interspecies metabolomics are discussed.

Entities:  

Keywords:  analysis technologies; interactions; metabolites; metabolomics; species

Year:  2021        PMID: 34072976     DOI: 10.3390/molecules26113311

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


  59 in total

1.  Potential of fermentation profiling via rapid measurement of amino acid metabolism by liquid chromatography-tandem mass spectrometry.

Authors:  Joseph J Dalluge; Sean Smith; Fernando Sanchez-Riera; Chris McGuire; Russell Hobson
Journal:  J Chromatogr A       Date:  2004-07-16       Impact factor: 4.759

2.  Simultaneous quantitative analysis of metabolites using ion-pair liquid chromatography-electrospray ionization mass spectrometry.

Authors:  Leon Coulier; Richard Bas; Sonja Jespersen; Elwin Verheij; Mariët J van der Werf; Thomas Hankemeier
Journal:  Anal Chem       Date:  2006-09-15       Impact factor: 6.986

3.  Combined proteome and metabolite-profiling analyses reveal surprising insights into yeast sulfur metabolism.

Authors:  Alexandra Lafaye; Christophe Junot; Yannick Pereira; Gilles Lagniel; Jean-Claude Tabet; Eric Ezan; Jean Labarre
Journal:  J Biol Chem       Date:  2005-04-26       Impact factor: 5.157

4.  Metabolomics: The greatest omics of them all?

Authors:  Danielle Ryan; Kevin Robards
Journal:  Anal Chem       Date:  2006-12-01       Impact factor: 6.986

5.  Ambient molecular imaging by desorption electrospray ionization mass spectrometry.

Authors:  Justin M Wiseman; Demian R Ifa; Andre Venter; R Graham Cooks
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

6.  The perinatal transition of the circulating metabolome in a nonhuman primate.

Authors:  Andrew C Beckstrom; Pattaraporn Tanya; Elizabeth M Humston; Laura R Snyder; Robert E Synovec; Sandra E Juul
Journal:  Pediatr Res       Date:  2012-02-15       Impact factor: 3.756

7.  Pressure-assisted capillary electrophoresis mass spectrometry using combination of polarity reversion and electroosmotic flow for metabolomics anion analysis.

Authors:  Kazuo Harada; Eiichiro Fukusaki; Akio Kobayashi
Journal:  J Biosci Bioeng       Date:  2006-05       Impact factor: 2.894

8.  METLIN: A Technology Platform for Identifying Knowns and Unknowns.

Authors:  Carlos Guijas; J Rafael Montenegro-Burke; Xavier Domingo-Almenara; Amelia Palermo; Benedikt Warth; Gerrit Hermann; Gunda Koellensperger; Tao Huan; Winnie Uritboonthai; Aries E Aisporna; Dennis W Wolan; Mary E Spilker; H Paul Benton; Gary Siuzdak
Journal:  Anal Chem       Date:  2018-02-09       Impact factor: 6.986

9.  Discovery of novel xylosides in co-culture of basidiomycetes Trametes versicolor and Ganoderma applanatum by integrated metabolomics and bioinformatics.

Authors:  Lu Yao; Li-Ping Zhu; Xiao-Yan Xu; Ling-Ling Tan; Martin Sadilek; Huan Fan; Bo Hu; Xiao-Ting Shen; Jie Yang; Bin Qiao; Song Yang
Journal:  Sci Rep       Date:  2016-09-12       Impact factor: 4.379

10.  Endophytic fungi produce gibberellins and indoleacetic acid and promotes host-plant growth during stress.

Authors:  Muhammad Waqas; Abdul Latif Khan; Muhammad Kamran; Muhammad Hamayun; Sang-Mo Kang; Yoon-Ha Kim; In-Jung Lee
Journal:  Molecules       Date:  2012-09-07       Impact factor: 4.411

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  3 in total

Review 1.  Metabolomics as an emerging tool to study plant-microbe interactions.

Authors:  Sneha Gupta; Martino Schillaci; Ute Roessner
Journal:  Emerg Top Life Sci       Date:  2022-04-15

Review 2.  Diagnosis and Treatment of Invasive Candidiasis.

Authors:  Natalia Barantsevich; Elena Barantsevich
Journal:  Antibiotics (Basel)       Date:  2022-05-26

Review 3.  Recent Developments in Metabolomics Studies of Endophytic Fungi.

Authors:  Kashvintha Nagarajan; Baharudin Ibrahim; Abdulkader Ahmad Bawadikji; Jun-Wei Lim; Woei-Yenn Tong; Chean-Ring Leong; Kooi Yeong Khaw; Wen-Nee Tan
Journal:  J Fungi (Basel)       Date:  2021-12-29
  3 in total

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