| Literature DB >> 34071523 |
Bei-Hao Shiu1,2, Ming-Hong Hsieh1,3,4, Wen-Chien Ting1,2,3, Ming-Chih Chou1,2,3, Lun-Ching Chang5, Chi-Chou Huang1,2,3, Shih-Chi Su6,7, Shun-Fa Yang1,8.
Abstract
Colorectal cancer (CRC) is a multifactorial malignancy, and its high incidence and mortality rate remain a global public health burden. Fibroblast growth factor receptor 4 (FGFR4) is a receptor tyrosine kinase that has been shown to play a key role in cancer development and prognosis via the activation of its downstream oncogenic signaling pathways. The present study aimed to explore the impact of FGFR4 gene polymorphisms on the risk and progression of CRC. Three FGFR4 single-nucleotide polymorphisms (SNPs), including rs1966265, rs351855, and rs7708357, were evaluated in 413 CRC cases and 413 gender- and age-matched cancer-free controls. We did not observe any significant association of three individual SNPs with the risk of CRC between the case and control group. However, while assessing the clinicopathological parameters, patients of rectal cancer possessing at least one minor allele of rs1966265 (AG and GG; AOR, 0.236; p = 0.046) or rs351855 (GA and AA; AOR, 0.191; p = 0.022) were found to develop less metastasis as compared to those who are homozygous for the major allele. Further analyses using the datasets from the Genotype-Tissue Expression (GTEx) Portal and The Cancer Genome Atlas (TCGA) revealed that rs351855 regulated FGFR4 expression in many human tissues, and increased FGFR4 levels were associated with the occurrence, advanced stage, and distal metastasis of colon adenocarcinoma. These data suggest that the amino acid change in combination with altered expression levels of FGFR4 due to genetic polymorphisms may affect CRC progression.Entities:
Keywords: colorectal cancer; fibroblast growth factor receptor 4; metastasis; single-nucleotide polymorphism
Year: 2021 PMID: 34071523 PMCID: PMC8227855 DOI: 10.3390/diagnostics11060978
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
The distributions of demographical characteristics in 413 controls and 413 patients with CRC.
| Variable | Controls (N = 413) | Patients (N = 413) | |
|---|---|---|---|
| Age (years) | |||
| <65 | 219 (53.0%) | 230 (55.7%) | 0.442 |
| ≥65 | 194 (47.0%) | 183 (44.3%) | |
| Gender | |||
| Male | 244 (59.1%) | 259 (62.7%) | 0.285 |
| Female | 169 (40.9%) | 154 (37.3%) | |
| Tumor location | |||
| Rectum | 106 (25.7%) | ||
| Left colon | 181 (43.8%) | ||
| Right colon | 126 (30.5%) | ||
| Stage | |||
| I + II | 203 (49.2%) | ||
| III + IV | 210 (50.8%) | ||
| Tumor T status | |||
| T1-T2 | 103 (24.9%) | ||
| T3-T4 | 310 (75.1%) | ||
| Lymph node status | |||
| N0 | 213 (51.6%) | ||
| N1 + N2 | 200 (48.4%) | ||
| Metastasis | |||
| M0 | 344 (83.3%) | ||
| M1 | 69 (16.7%) | ||
| Lymphovascular invasion | |||
| No | 263 (57.1%) | ||
| Yes | 177 (42.9%) | ||
| Perineural invasion | |||
| No | 237 (57.4%) | ||
| Yes | 176 (42.6%) | ||
| Pathologic grading | |||
| Well | 6 (1.5%) | ||
| Moderately | 375 (90.8%) | ||
| Poorly | 32 (7.7%) |
Genotype distributions of FGFR4 gene polymorphisms in 413 controls and 413 patients with CRC.
| Variable | Controls (N = 413) | Patients (N = 413) | OR (95% CI) | AOR (95% CI) |
|---|---|---|---|---|
| rs1966265 | ||||
| AA | 99 (24.0%) | 122 (29.5%) | 1.000 (reference) | 1.000 (reference) |
| AG | 212 (51.3%) | 192 (46.5%) | 0.735 (0.529–1.022) | 0.730 (0.525–1.015) |
| GG | 102 (24.7%) | 99 (24.0%) | 0.788 (0.537–1.155) | 0.786 (0.535–1.154) |
| AG + GG | 314 (76.0%) | 291 (70.5%) | 0.752 (0.552–1.025) | 0.748 (0.548–1.020) |
| rs351855 | ||||
| GG | 124 (30.0%) | 129 (31.2%) | 1.000 (reference) | 1.000 (reference) |
| GA | 205 (49.6%) | 202 (48.9%) | 0.947 (0.692–1.296) | 0.947 (0.692–1.297) |
| AA | 84 (20.4%) | 82 (19.9%) | 0.938 (0.634–1.388) | 0.935 (0.632–1.385) |
| GA + AA | 289 (70.0%) | 284 (68.8%) | 0.945 (0.703–1.270) | 0.944 (0.702–1.270) |
| rs7708357 | ||||
| GG | 402 (97.3%) | 406 (98.3%) | 1.000 (reference) | 1.000 (reference) |
| GA | 11 (2.7%) | 7 (1.7%) | 0.630 (0.242–1.642) | 0.615 (0.236–1.605) |
| AA | 0 (0.0%) | 0 (0.0%) | ||
| AG + AA | 11 (2.7%) | 7 (1.7%) | 0.630 (0.242–1.642) | 0.615 (0.236–1.605) |
The odds ratio (OR) with their 95% confidence intervals were estimated by logistic regression models. The adjusted odds ratio (AOR) with their 95% confidence intervals were estimated by multiple logistic regression models after controlling for age and gender.
Distribution frequency of the clinical status and FGFR4 rs1966265 genotype frequencies in 413 CRC patients.
| Variable | All (N = 413) | Rectum (N = 106) | Colon (N = 307) | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Stages | Stages | Stages | |||||||
| I + II | III + IV | I + II | III + IV | I + II | III + IV | ||||
| AA | 58 (28.6%) | 64 (30.5%) | 12 (20.3%) | 14 (29.8%) | 46 (31.9%) | 50 (30.7%) | |||
| AG | 98 (48.3%) | 94 (44.8%) | 32 (54.2%) | 22 (46.8%) | 66 (45.8%) | 72 (44.2%) | |||
| GG | 47 (23.1%) | 52 (24.7%) | 15 (25.4%) | 11 (23.4%) | 32 (22.2%) | 41 (25.2%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Tumor T status | Tumor T status | Tumor T status | |||||||
| T1 + T2 | T3 + T4 | T1 + T2 | T3 + T4 | T1 + T2 | T3 + T4 | ||||
| AA | 32 (31.1%) | 90 (29.0%) | 8 (22.9%) | 18 (25.4%) | 24 (35.3%) | 72 (30.1%) | |||
| AG | 45 (43.7%) | 147 (47.4%) | 17 (48.6%) | 37 (52.1%) | 28 (41.2%) | 110 (46.0%) | |||
| GG | 26 (25.2%) | 73 (23.5%) | 10 (28.6%) | 16 (22.5%) | 16 (23.5%) | 57 (23.8%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Lymph node status | Lymph node status | Lymph node status | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| AA | 64 (30.0%) | 58 (29.0%) | 13 (21.3%) | 13 (28.9%) | 51 (33.6%) | 45 (29.0%) | |||
| AG | 100 (46.9%) | 92 (46.0%) | 31 (50.8%) | 23 (51.1%) | 69 (45.4%) | 69 (44.5%) | |||
| GG | 49 (23.0%) | 50 (25.0%) | 17 (27.9%) | 9 (20.0%) | 32 (21.1%) | 41 (26.5%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Metastasis | Metastasis | Metastasis | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| AA | 98 (28.5%) | 24 (34.8%) | 18 (20.2%) | 8 (47.1%) | 80 (31.4%) | 16 (30.8%) | |||
| AG | 164 (47.7%) | 28 (40.6%) | 49 (55.1%) | 5 (29.4%) | 115 (45.1%) | 23 (44.2%) | |||
| GG | 82 (23.8%) | 17 (24.6%) | 22 (24.7%) | 4 (23.5%) | 60 (23.5%) | 13 (25.0%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Lymphovascular invasion | Lymphovascular invasion | Lymphovascular invasion | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| AA | 71 (30.1%) | 51 (28.8%) | 17 (24.6%) | 9 (24.3%) | 54 (32.3%) | 42 (30.0%) | |||
| AG | 110 (46.6%) | 82 (46.3%) | 34 (49.3%) | 20 (54.1%) | 76 (45.5%) | 62 (44.3%) | |||
| GG | 55 (23.3%) | 44 (24.9%) | 18 (26.1%) | 8 (21.6%) | 37 (22.2%) | 36 (25.7%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Perineural invasion | Perineural invasion | Perineural invasion | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| AA | 73 (30.8%) | 49 (27.8%) | 17 (24.3%) | 9 (25.0%) | 56 (33.5%) | 42 (28.6%) | |||
| AG | 107 (45.1%) | 85 (48.3%) | 35 (50.0%) | 19 (52.8%) | 72 (43.1%) | 62 (47.1%) | |||
| GG | 57 (24.1%) | 42 (23.9%) | 18 (25.7%) | 8 (22.2%) | 39 (23.4%) | 36 (24.3%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Cell differentiation | Cell differentiation | Cell differentiation | |||||||
| Well/Moderately | Poorly | Well/Moderately | Poorly | Well/Moderately | Poorly | ||||
| AA | 113 (29.7%) | 9 (28.1%) | 26 (24.8%) | 0 (0.0%) | 87 (31.5%) | 9 (29.0%) | |||
| AG | 177 (46.5%) | 15 (46.9%) | 53 (50.5%) | 1 (100.0%) | 124 (44.9%) | 14 (45.2%) | |||
| GG | 91 (23.9%) | 8 (25.0%) | 26 (24.8%) | 0 (0.0%) | 65 (23.6%) | 8 (25.8%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
a AOR (95% CI): 0.236 (0.057–0.972); The adjusted odds ratio (AOR) with their 95% confidence intervals were estimated by multiple logistic regression models after controlling for stages, tumor T status, lymph node status, metastasis, lymphovascular invasion, perineural invasion, cell differentiation.
Distribution frequency of the clinical status and FGFR4 rs351855 genotype frequencies in 413 CRC patients.
| Variable | All (N = 413) | Rectum (N = 106) | Colon (N = 307) | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Stages | Stages | Stages | |||||||
| I + II | III + IV | I + II | III + IV | I + II | III + IV | ||||
| GG | 62 (30.5%) | 67 (31.9%) | 13 (22.0%) | 16 (34.0%) | 49 (34.0%) | 51 (31.3%) | |||
| GA | 101 (49.8%) | 101 (48.1%) | 34 (57.6%) | 22 (46.8%) | 67 (46.5%) | 79 (48.5%) | |||
| AA | 40 (19.7%) | 42 (20.0%) | 12 (20.4%) | 9 (19.2%) | 28 (19.5%) | 33 (20.2%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Tumor T status | Tumor T status | Tumor T status | |||||||
| T1 + T2 | T3 + T4 | T1 + T2 | T3 + T4 | T1 + T2 | T3 + T4 | ||||
| GG | 34 (33.0%) | 95 (30.6%) | 9 (25.7%) | 20 (28.2%) | 25 (36.8%) | 75 (31.4%) | |||
| GA | 47 (45.6%) | 155 (50.0%) | 18 (51.4%) | 38 (53.5%) | 29 (42.6%) | 117 (49.0%) | |||
| AA | 22 (21.4%) | 60 (19.4%) | 8 (22.9%) | 13 (18.3%) | 14 (20.6%) | 47 (19.7%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Lymph node status | Lymph node status | Lymph node status | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| GG | 68 (31.9%) | 61 (30.5%) | 14 (23.0%) | 15 (33.3%) | 54 (35.5%) | 46 (29.7%) | |||
| GA | 103 (48.4%) | 99 (49.5%) | 33 (54.1%) | 23 (51.1%) | 70 (46.1%) | 76 (49.0%) | |||
| AA | 42 (19.7%) | 40 (20.0%) | 14 (22.9%) | 7 (15.6%) | 28 (18.4%) | 33 (21.3%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Metastasis | Metastasis | Metastasis | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| GG | 103 (29.9%) | 26 (37.7%) | 20 (22.5%) | 9 (52.9%) | 83 (32.5%) | 17 (32.7%) | |||
| GA | 172 (50.0%) | 30 (43.5%) | 52 (58.4%) | 4 (23.5%) | 120 (47.1%) | 26 (50.0%) | |||
| AA | 69 (20.1%) | 13 (18.8%) | 17 (19.1%) | 4 (23.6%) | 52 (20.4%) | 9 (17.3%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Lymphovascular invasion | Lymphovascular invasion | Lymphovascular invasion | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| GG | 75 (31.8%) | 54 (30.5%) | 19 (27.5%) | 10 (27.0%) | 56 (33.5%) | 44 (31.4%) | |||
| GA | 114 (48.3%) | 88 (49.7%) | 35 (50.7%) | 21 (56.8%) | 79 (47.3%) | 67 (47.9%) | |||
| AA | 47 (19.9%) | 35 (19.8%) | 15 (21.7%) | 6 (16.2%) | 32 (19.2%) | 29 (20.7%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Perineural invasion | Perineural invasion | Perineural invasion | |||||||
| Negative | Positive | Negative | Positive | Negative | Positive | ||||
| GG | 76 (32.1%) | 53 (30.1%) | 18 (25.7%) | 11 (30.6%) | 58 (34.7%) | 42 (30.0%) | |||
| GA | 113 (47.7%) | 89 (50.6%) | 37 (52.9%) | 19 (52.8%) | 76 (45.5%) | 70 (50.0%) | |||
| AA | 48 (20.3%) | 34 (19.3%) | 15 (21.4%) | 6 (16.7%) | 33 (19.8%) | 28 (20.0%) | |||
| Dominant model | |||||||||
| Log-additive model | |||||||||
| Cell differentiation | Cell differentiation | Cell differentiation | |||||||
| Well/Moderately | Poorly | Well/Moderately | Poorly | Well/Moderately | Poorly | ||||
| GG | 119 (31.2%) | 10 (31.3%) | 28 (26.7%) | 1 (100.0%) | 91 (33.0%) | 9 (29.0%) | |||
| GA | 185 (48.6%) | 17 (43.1%) | 56 (53.3%) | 0 (0.0%) | 129 (46.7%) | 17 (54.8%) | |||
| AA | 77 (20.2%) | 5 (15.6%) | 21 (20.0%) | 0 (0.0%) | 56 (20.3%) | 8 (16.2%) | |||
| Dominant model | --- | ||||||||
| Log-additive model | --- | ||||||||
a AOR (95% CI): 0.191 (0.046–0.786); The adjusted odds ratio (AOR) with their 95% confidence intervals were estimated by multiple logistic regression models after controlling for stages, tumor T status, lymph node status, metastasis, lymphovascular invasion, perineural invasion, cell differentiation.
Figure 1rs351855 regulates the expression of FGFR4. eQTL analysis of rs351855 in representative (A) whole blood and (B) colon tissues based on data from the GTEx portal. p-Values are calculated with the linear regression model.
Figure 2FGFR4 expression levels are associated with clinicopathological parameters in colon adenocarcinoma. Correlations of increased FGFR4 expression with the (A) occurrence, (B) advanced stage (stage IV), and (C) distal metastasis of colon adenocarcinoma from The Cancer Genome Atlas (TCGA) database. p-Values are calculated with Student’s t test and adjusted by using Bonferroni correction.