Literature DB >> 34071124

SEED-G: Simulated EEG Data Generator for Testing Connectivity Algorithms.

Alessandra Anzolin1,2,3, Jlenia Toppi2,3, Manuela Petti2,3, Febo Cincotti2,3, Laura Astolfi2,3.   

Abstract

EEG signals are widely used to estimate brain circuits associated with specific tasks and cognitive processes. The testing of connectivity estimators is still an open issue because of the lack of a ground-truth in real data. Existing solutions such as the generation of simulated data based on a manually imposed connectivity pattern or mass oscillators can model only a few real cases with limited number of signals and spectral properties that do not reflect those of real brain activity. Furthermore, the generation of time series reproducing non-ideal and non-stationary ground-truth models is still missing. In this work, we present the SEED-G toolbox for the generation of pseudo-EEG data with imposed connectivity patterns, overcoming the existing limitations and enabling control of several parameters for data simulation according to the user's needs. We first described the toolbox including guidelines for its correct use and then we tested its performances showing how, in a wide range of conditions, datasets composed by up to 60 time series were successfully generated in less than 5 s and with spectral features similar to real data. Then, SEED-G is employed for studying the effect of inter-trial variability Partial Directed Coherence (PDC) estimates, confirming its robustness.

Entities:  

Keywords:  EEG; brain connectivity; ground-truth networks; multivariate autoregressive models; partial directed coherence; simulated neuro-electrical data

Mesh:

Year:  2021        PMID: 34071124     DOI: 10.3390/s21113632

Source DB:  PubMed          Journal:  Sensors (Basel)        ISSN: 1424-8220            Impact factor:   3.576


  3 in total

1.  Independent evaluation of the harvard automated processing pipeline for Electroencephalography 1.0 using multi-site EEG data from children with Fragile X Syndrome.

Authors:  Emma Auger; Elizabeth M Berry-Kravis; Lauren E Ethridge
Journal:  J Neurosci Methods       Date:  2022-02-16       Impact factor: 2.390

2.  Assessment of Effective Network Connectivity among MEG None Contaminated Epileptic Transitory Events.

Authors:  Abir Hadriche; Ichrak Behy; Amal Necibi; Abdennaceur Kachouri; Chokri Ben Amar; Nawel Jmail
Journal:  Comput Math Methods Med       Date:  2021-12-28       Impact factor: 2.238

3.  Complex Pearson Correlation Coefficient for EEG Connectivity Analysis.

Authors:  Zoran Šverko; Miroslav Vrankić; Saša Vlahinić; Peter Rogelj
Journal:  Sensors (Basel)       Date:  2022-02-14       Impact factor: 3.576

  3 in total

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