| Literature DB >> 34068920 |
Juan Ventura1, Clara Uriel1, Ana M Gomez1, Edurne Avellanal-Zaballa2, Jorge Bañuelos2, Inmaculada García-Moreno3, Jose Cristobal Lopez1.
Abstract
A convergent synthetic route to a tetrasaccharide related to PI-88, which allows the incorporation of a fluorescent BODIPY-label at the reducing-end, has been developed. The strategy, which features the use of 1,2-methyl orthoesters (MeOEs) as glycosyl donors, illustrates the usefulness of suitably-designed BODIPY dyes as glycosyl labels in synthetic strategies towards fluorescently-tagged oligosaccharides.Entities:
Keywords: 1,2-methyl orthoesters; BODIPY; PI-88; fluorescent labeling; glycosylation
Year: 2021 PMID: 34068920 PMCID: PMC8156587 DOI: 10.3390/molecules26102909
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1PI-88 (1,2), BODIPY (3), IUPAC numbering) and 1,2-methyl orthoester glycosyl donors (4) used in this study.
Scheme 1Retrosynthesis of PI-88 tetrasaccharide analogue 10, involving the sole use of 1,2-methyl orthoester glycosyl donors, 4 and 9.
Scheme 2(a) Glycosylation of BODIPY 11 with MeOE 4c and saponification attempts; (b) one-pot synthesis of 4,4-diphenyl BODIPY 15.
Scheme 3(a) Synthesis of BODIPY disaccharide acceptor 6; (b) access to MeOE-disaccharide donor 9, from thioglycoside 7, by regioselective glycosylation with MeOE 4b and subsequent orthoester formation on the ensuing disaccharidic thioglycoside intermediate 8.
Scheme 4Regioselective glycosylation of triol 6 with MeOE-disaccharide 9 leading to tetrasaccharide 10.
Figure 2Absorption (in blue) and normalized fluorescence (in red) spectra of BODIPY 15 and its glycosylated derivative 16a in diluted solution of ethyl acetate. The spectral profiles of 10 fully resemble those of 16a. The excited state optimized geometry of 15 in two different views is also enclosed with key dihedral angles to show the bending of the chromophore.
Photophysical 1 and laser 2 properties of BODIPY 15, and glycosylated derivatives 16a and 10, in ethyl acetate. For the sake of comparison, the corresponding photophysical data of the F-BODIPY counterpart (in ethanol) have been added. For additional photophysical data, see Table S1.
| Compound | λab (nm) | εmax | λfl (nm) | ∅ | <τ> (ns) | λla (nm) | Eff (%) |
|---|---|---|---|---|---|---|---|
|
| 499.5 | 6.4 | 513.0 | 0.74 | 6.45 | 540 | 60 |
|
| 497.0 | 4.8 | 511.5 | 0.22 | 2.83 | 533 | 18 |
|
| 500.0 | 4.5 | 516.0 | 0.31 | 3.19 | 545 | 38 |
|
| 500.5 | 4.1 | 515.0 | 0.31 | 3.57 | 547 | 36 |
1 Registered under a soft irradiation regime; dye concentration: 2 μM. Absorption (λab) and fluorescence (λfl) wavelength, molar absorption (εmax) (104 M−1 cm−1), fluorescence quantum yield (∅), and amplitude-average lifetime (<τ>). 2 Recorded under a hard irradiation regime; dye concentration 2 mM. Peak wavelength for the laser emission (λla) and efficiency (Eff (%)) defined as the ratio between the energy of the laser output and the pump energy incident on the cell surface.