Literature DB >> 34063931

Nucleoporin TPR Affects C2C12 Myogenic Differentiation via Regulation of Myh4 Expression.

Jana Uhlířová1,2, Lenka Šebestová1,3, Karel Fišer4, Tomáš Sieger5, Jindřiška Fišerová1, Pavel Hozák1,6.   

Abstract

The nuclear pore complex (NPC) has emerged as a hub for the transcriptional regulation of a subset of genes, and this type of regulation plays an important role during differentiation. Nucleoporin TPR forms the nuclear basket of the NPC and is crucial for the enrichment of open chromatin around NPCs. TPR has been implicated in the regulation of transcription; however, the role of TPR in gene expression and cell differentiation has not been described. Here we show that depletion of TPR results in an aberrant morphology of murine proliferating C2C12 myoblasts (MBs) and differentiated C2C12 myotubes (MTs). The ChIP-Seq data revealed that TPR binds to genes linked to muscle formation and function, such as myosin heavy chain (Myh4), myocyte enhancer factor 2C (Mef2C) and a majority of olfactory receptor (Olfr) genes. We further show that TPR, possibly via lysine-specific demethylase 1 (LSD1), promotes the expression of Myh4 and Olfr376, but not Mef2C. This provides a novel insight into the mechanism of myogenesis; however, more evidence is needed to fully elucidate the mechanism by which TPR affects specific myogenic genes.

Entities:  

Keywords:  LSD1; Myh4; Olfr; TPR; gene expression; myogenic differentiation; nucleoporin; translocated promoter region

Year:  2021        PMID: 34063931     DOI: 10.3390/cells10061271

Source DB:  PubMed          Journal:  Cells        ISSN: 2073-4409            Impact factor:   6.600


  55 in total

1.  Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.

Authors:  J Gough; K Karplus; R Hughey; C Chothia
Journal:  J Mol Biol       Date:  2001-11-02       Impact factor: 5.469

2.  Function analysis of Mef2c promoter in muscle differentiation.

Authors:  Wei Jin; Min Liu; Jian Peng; Siwen Jiang
Journal:  Biotechnol Appl Biochem       Date:  2017-08-23       Impact factor: 2.431

3.  LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription.

Authors:  Eric Metzger; Melanie Wissmann; Na Yin; Judith M Müller; Robert Schneider; Antoine H F M Peters; Thomas Günther; Reinhard Buettner; Roland Schüle
Journal:  Nature       Date:  2005-08-03       Impact factor: 49.962

4.  Extracellular signal-regulated kinase 2 (ERK2) phosphorylation sites and docking domain on the nuclear pore complex protein Tpr cooperatively regulate ERK2-Tpr interaction.

Authors:  Tomás Vomastek; Marcin P Iwanicki; W Richard Burack; Divya Tiwari; Devanand Kumar; J Thomas Parsons; Michael J Weber; Vinay Kumar Nandicoori
Journal:  Mol Cell Biol       Date:  2008-09-15       Impact factor: 4.272

5.  p21(CIP1) and p57(KIP2) control muscle differentiation at the myogenin step.

Authors:  P Zhang; C Wong; D Liu; M Finegold; J W Harper; S J Elledge
Journal:  Genes Dev       Date:  1999-01-15       Impact factor: 11.361

6.  Nucleoporin-mediated regulation of cell identity genes.

Authors:  Arkaitz Ibarra; Chris Benner; Swati Tyagi; Jonah Cool; Martin W Hetzer
Journal:  Genes Dev       Date:  2016-11-02       Impact factor: 11.361

7.  Regulation of autophagy by nucleoporin Tpr.

Authors:  Tatsuyoshi Funasaka; Eriko Tsuka; Richard W Wong
Journal:  Sci Rep       Date:  2012-11-20       Impact factor: 4.379

8.  Spatial compartmentalization at the nuclear periphery characterized by genome-wide mapping.

Authors:  Feinan Wu; Jie Yao
Journal:  BMC Genomics       Date:  2013-08-30       Impact factor: 3.969

9.  LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control.

Authors:  Jianxun Wang; Francesca Telese; Yuliang Tan; Wenbo Li; Chunyu Jin; Xin He; Harihar Basnet; Qi Ma; Daria Merkurjev; Xiaoyan Zhu; Zhijie Liu; Jie Zhang; Kenny Ohgi; Havilah Taylor; Ryan R White; Cagdas Tazearslan; Yousin Suh; Todd S Macfarlan; Samuel L Pfaff; Michael G Rosenfeld
Journal:  Nat Neurosci       Date:  2015-07-27       Impact factor: 24.884

10.  LSD1 mediates metabolic reprogramming by glucocorticoids during myogenic differentiation.

Authors:  Kotaro Anan; Shinjiro Hino; Noriaki Shimizu; Akihisa Sakamoto; Katsuya Nagaoka; Ryuta Takase; Kensaku Kohrogi; Hirotaka Araki; Yuko Hino; Shingo Usuki; Shinya Oki; Hirotoshi Tanaka; Kimitoshi Nakamura; Fumio Endo; Mitsuyoshi Nakao
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 16.971

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